TCONS_00050466 (transcript) - C. hemisphaerica

Overview
NameTCONS_00050466
Unique NameTCONS_00050466
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4196

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00050466 ID=TCONS_00050466|Name=TCONS_00050466|organism=Clytia hemisphaerica|type=transcript|length=4196bp
GGGGGTTTTAACCAAAGCTATTCCTTATATTCTGCAATTGCCAAAGGAGC
CAGAACTCTGAAATACAAtgatcaaatttcttttttgcttcCAGAGCAAC
TTTGTGACTTTTGATTCCACAGTTGGAACTATGTTATTTCTTCTGGATAT
TTGACAAAGAAACTTGCACCCTAGCAAACATTCCCGTATCTAAATCGCAA
TTTTGATTGAGGTTACGTTATCTCTGTCATTTACAATGGGTCAGAGATTC
TCCTACAATTTTATACATGGTACtgcaatttcaaaatcaaaatggcgaag
CTGAACTCGAGTCTGACAGCCATGGATTGGCTTCCTCAACTCTCTGTTGG
GGGAGCCTTGACAACTGGTAACCCTGCGAACATTAATCAAACACAACCCA
TGAAGGCTACCCAACGTGTACCCTTTGGACAATTTGATGTAACTGCAAAA
TATGATGGCACTTCAGAACGATTTGGAAAGTCAAAACCTCCATACAGTTA
TGCAAATCTGATAGCATTTGCTATTAACTCTACTGCTAAGAATAAAATGA
CTCTATCAGAAATATATCAATGGATATCTGAAAGTTTTCCTTACTATAAT
GAAACTAGCAATGGCTGGAAGaATTCCATCCGGCACAACCTATCATTGAA
TAAATGCTTTATCAAACTTCCTCGGACAAAAGATGACCCAGGAAAGGGCT
CTTACTGGGCAATAGACACTTCAAATATTCATACAAATTCAGAACAAGAT
TCTTACAAACAATCAACAAATCAAACCAAAttcaagctaaaaaatgatac
cAGACAACTATCACCATACGGTAACAACAGAGGTCATTCCCCTGGGAGGA
CTTCACCGATTGTTTCTCCATCATCGCCACAAAAGTTGAATAATTCTTTT
GAATCAACAAGTAGTTCAGATTACTCCAATCCAAATAGTGTCGGTTCATC
GCTTGAAACACCTCAAATATTTGTCAACAATCAATCTGCTGCAGCTCTTG
CCACTCAAGTAAACTCTACTAAACCCTCATCTCAAAAGACAGACCCCTCA
AGGCAATGTGCGTTAGACAATAAAGTTTTTGCAGAACATTTTAACTTGGA
CGATTTATCAGCATCCTTTAGAAGTTTATACAAATCAGTTTTCAGCCAAC
AGTCTTCTTCCTCGTCCATATCCTCGTCAGCTGGGATGAACTCGATCAGT
TCTGTTTCCTCTCAAAACTCAACACCCAAAGaaaaaaatattttctcatc
aCAACTGCAACCAACTTCATCATCAGGCGGTGCCAATCATTTGTCACATT
CTGGTCAATTGGCACCTGTCTCAATCACCGAGCCGTCAAACAGCATGTCT
GAGAAAGAAGTTCTAANACAAGTAGTTCAGATTACTCCAATCCAAATAGT
GTCGGTTCATCGCTTGAAACACCTCAAATATTTGTCAACAATCAATCTGC
TGCAGCTCTTGCCACTCAAGTAAACTCTACTAAACCCTCATCTCAAAAGA
CAGACCCCTCAAGGCAATGTGCGTTAGACAATAAAGTTTTTGCAGAACAT
TTTAACTTGGACGATTTATCAGCATCCTTTAGAAGTTTATACAAATCAGT
TTTCAGCCAACAGTCTTCTTCCTCGTCCATATCCTCGTCAGCTGGGATGA
ACTCGATCAGTTCTGTTTCCTCTCAAAACTCAACACCCAAAGaaaaaaat
attttctcatcaCAACTGCAACCAACTTCATCATCAGGCGGTGCCAATCA
TTTGTCACATTCTGGTCAATTGGCACCTGTCTCAATCACCGAGCCGTCAA
ACAGCATGTCTGAGAAAGAAGTTCTAAGTACCATGGAAGCCTTAATGTCA
AGTATGAATTCTGGCGACTGGGGAAGCATTATGCCTGATCAGTTTTACAG
TTTGATAGATTCGTTACAGGAGATGGACGGGCTTGACCAGAAAGATATAG
ACTCTTTAGAAGAGTCGTATACAAACTATTTGAAATTGCAAGGAACATTT
GATTACCTTGATAATGATGATGTTGAATTAAAAGCAGAACTTCTTCAACC
TTCTCATCACaatattcaacaaaataatTTCAGTACAATCCCTGAAAATC
ATGTCAGCCCACATGGTAGTCCTTACACAAGTCCACTACCACCGCCTACT
TTACAGCCAAATCCAAATATGTTAAACCATGGTCGAATGAGCCCTGCAAG
TTCTGCAACATCACCAATGCCTACTTTAATGGACAGTAATGATTTAAACC
ACGTGTTACAGCCTATGTATGCAAATTCTATGAGCCCTATTAATCCTAAC
AGTGTCTTAGGTAAATCAACATCAAGCAATGGTTCAGTTGGAAGAAACAT
GGCAATGAATCCGCCagtttcaaatcaaatgaatgcTCGATACTCCATGA
ATGCAAACAGCCCAATGCAACCATCACCCTTGAATCATTACAGCCATTCT
CCATCTACTTCTCCCCAACCTCCGCCCTCTTACTCACCTCAACCACCTCA
ATACACCAACCAAGGTTCGCCAGCTATGCAAATGAACCATTCCAATGAAA
TGAATCGTGCTTTAATGCAAGGTAGTCCACAACcacctccgctctaccaa
caaCCACAGCCGCCAAGACAACCATCGCCAAGAACGGCTCATCAACAACC
ACGATCACAGAATCAACAATCGAGGAAACTTTACCAGCAtgttgaagatg
aagaagatttTGATTGGAATTCTCTCCTATGATGCaagaaataacaaaat
attAGTTAAATCCCTTAAATATTCAAGAAATGGTTCCACCCACACCAGAT
TATGCATACACGTTATAttacaatacaatacaaaaaATGATTATTATGAA
TTACCACATTACCAGGGAAGGAATGAAATCCAATTGCTcaatgatttgaa
aaatatagtcCAACTagaatcaaaaaatattcaaatttaaagtaaaattt
aatgTGATTGGATATGTTGAGTATTGGTTGAACACTCTTGCATCCTCAAC
AAAACTATTAATACTGGTTTTCAGTGAGGGTAATTCAGTTTTTATTTGCA
CTTATTTTTATGACGACCTCCTCTGCAAATGTATATAGATTAAGTTTTTT
GGCAGGAAACCCAGGGTGCTGGAAACAGATCCTGGCATCAGAAGAAAACT
AAAACTGAAATGGAATTTTCCTTTAACAAAATGTTGAGAAAAAATGTAAA
ACGGAAAAATTATGTAGTATATTTATATTTTGAAAAAAACAAGTATTCTT
ACAGTACTGTATTTATATTTTTGCTTTTATTGTTTTAGTTTTTTTTGTTT
TATGTTGTCTTGAAATGGAACATTTTGCGCAGATTGTTTTCTTAATTTTT
CATGATGGAGTAGAAACTGGCTCAAGTTCTGAACCATATACAGCCGAGTC
TCCATGATTCGATCAACTCTACATTACATTTCGATcgagttttatggtcc
cttcaatTAACAATGCCTCATAAATCTTACTccgtaactcgaaatttcct
taactctaACAAACCTGCGTcagagttaaagagactccattTTATCACCA
ATCACGACATGAAATTAACTATATTGCCCTTTTGTGTTTACTGCGTGTGC
AAGATTTCCATTACtcctttttttgttattttttgctcCAAGTTTTTATT
AGGTGACAATTTTTGCAGctatttattattttgatacAGTGATACTATTT
TTTCTTTATAGTGGGTTTTAAATAATGTGCTGGTGGTACAAACTTAACAA
ACAACCAAAAATAACGGTGTAGGCCAATCTAAAAAGGCTTCTTGATTGAC
ATATCGCCAAGGGACATTTTCCTTGATTCTCATTTTTTCGGCTAATTGAA
AAATGATTCGCAGATAACCTAAACCCTCTTTCAATACAATAAATGACAAT
ATGTCATTTGTAGGCTTTTCTGCCTTAAAATCACCTCACTTACTAGTTGA
TTTAATCGAATAGATTCTACGTTGTTTTAATGAAACTTGGTCTACCAATT
TTTGGTTAGTTTGTTCATTTGCatgaatttcaagaattttttttcttttt
gtaaatagGAACTTTTTGTATATGATGAATTTTTATGCATTTGGTTTGTT
GTCTGTTCTATTCTCTTATGATCTTTAAAAAAGTCGGAAAGAATTGAAGA
GCTCCGTGATGACATATTGttgagttttgaatttttttgaatggcA
Run BLAST on NCBI

protein sequence of TCONS_00050466-protein

>TCONS_00050466-protein ID=TCONS_00050466-protein|Name=TCONS_00050466-protein|organism=Clytia hemisphaerica|type=polypeptide|length=393bp
MAKLNSSLTAMDWLPQLSVGGALTTGNPANINQTQPMKATQRVPFGQFDV
TAKYDGTSERFGKSKPPYSYANLIAFAINSTAKNKMTLSEIYQWISESFP
YYNETSNGWKNSIRHNLSLNKCFIKLPRTKDDPGKGSYWAIDTSNIHTNS
EQDSYKQSTNQTKFKLKNDTRQLSPYGNNRGHSPGRTSPIVSPSSPQKLN
NSFESTSSSDYSNPNSVGSSLETPQIFVNNQSAAALATQVNSTKPSSQKT
DPSRQCALDNKVFAEHFNLDDLSASFRSLYKSVFSQQSSSSSISSSAGMN
SISSVSSQNSTPKEKNIFSSQLQPTSSSGGANHLSHSGQLAPVSITEPSN
SMSEKEVLXQVVQITPIQIVSVHRLKHLKYLSTINLLQLLPLK
Run BLAST on NCBI

transcript from alignment at scaffold_172:88634..99408-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00050466 ID=TCONS_00050466|Name=TCONS_00050466|organism=Clytia hemisphaerica|type=transcript|length=10775bp|location=Sequence derived from alignment at scaffold_172:88634..99408- (Clytia hemisphaerica)
GGGGGTTTTAACCAAAGCTATTCCTTATATTCTGCAATTGCCAAAGGAGC
CAGAACTCTGAAATACAATGATCAAATTTCTTTTTTGCTTCCAGAGCAAC
TTTGTGACTTTTGATTCCACAGTTGGAACTATGTTATTTCTTCTGGATAT
TTGACAAAGAAACTTGCACCCTAGCAAACATTCCCGTATCTAAATCGCAA
TTTTGATTGAGGTTACGTTATCTCTGTCATTTACAATGGGTCAGAGATTC
TCCTACAATTTTATACATGGTACTGCAATTTCAAAATCAAAATGGCGAAG
CTGAACTCGAGTCTGACAGCCATGGATTGGCTTCCTCAACTCTCTGTTGG
GGGAGCCTTGACAACTGGTAACCCTGCGAACATTAATCAAACACAACCCA
TGAAGGCTACCCAACGTGTACCCTTTGGACAATTTGATGTAACTGCAAAA
TATGATGGCACTTCAGAACGATTTGGAAAGTCAAAACCTCCATACAGTTA
TGCAAATCTGATAGCATTTGCTATTAACTCTACTGCTAAGAATAAAATGA
CTCTATCAGAAATATATCAATGGATATCTGAAAGTTTTCCTTACTATAAT
GAAACTAGCAATGGCTGGAAGGTGAATGTTTACATTTTTATTTATTTATT
GTGTTTTGTTTTGATTTAGCTATGTTTGTTCCTTTTGTCACAGTGTTGCA
ACTCTTGTAAACCAAGGCAATTGAATATCTCAAAAAGTCTACAGTCTATT
GGTCCTATATCATTCTGGTTGTATTTCCCACACAGCATGGTTAGCGGTAT
AGCCCTAACTTTTTCCGGTACTTGGGTGCACTTGGCAATTTTGAATTTGA
AAAAGTCCCGAACATTACTCGAACTAGCTTGCATATGTTCAGGCCAGGTT
TTTGGAAGTGAAAATCCAAAATTTTGTGGCTCAAATTGATTACCGTAAGT
TGGTCTAATATCGACATCCCTCGTCTAATTCCGACACCCTTCTTTAGAGA
CAGGAATATAATATGAAAGCTTGAGTTGAATCACTGATTGAAAAAAGATT
ATTCCTCTCTGACCACTAAGCAAAGAAAAACAGTTTTAACCTTTCTATCA
ATTTCAGCTGATAAAAAGGGTGTCGGAATTAGAGGAGGGCGGATGTCGAC
ATTAGACCAAGTTACGGTATTTTGGTATGTTTTCCAGCCATACCCTTGGT
CATTTTGTATTCTTTTCAGCAGTTAACCAGATTGCACAGTATACGTATGA
CAGAAATCATCTAGATCAAAAAGTAGTTGAGCCTACATTATCAGAGGATA
CCTTAAATCAGTCTAAATGTCAATATCCCTCTTTTAATTATGACACTTTT
TTTTAGAGCAGGTATCAATGGAAAGGTTGAGATTGCCGATTGAAACTATA
TTTCTTTGCCTAGTGGTCAGAGGAGAGGCACACATCCTTCAGTCAGTTAG
TCACACTAGCGTCCCGCGTATAAAAAATTAATGCTGCGAAAGCGCTATAT
CATTTACTTGACTCGCAAGCAAAATAATGCACCACAAAACTTTTAAAGGG
ATTCATGAAAAAATAACCCAGCACTTTTTAATGAAATTAACATTTTCAAA
AACTATGAAAAATTGCCCAAAATTTTAGCCTTAGATGAAAAATTTTTAGC
CAAGCCAACCTTGAAAACTAATTTGAAGATCAACTTCCCAAGAAAAAGAT
CTACGGGGGAGACGGAACCCACCTAGATTTGCGCACCGCCAGATAGGCTT
TTTCCTGGAAATTTTGCCGGACTTCGAACACTGACCCCTTTACCTGTGCG
GAATTTTTTAATTTTGCGTATAAACAAAGCCTTAAAAATTGAAGCGCTGT
CTCAGGAATTGAATGACAAAATTTGGTTGGTTAATGCTGCACGTTCGCAA
TCAGTCATTTTGTCTCATTTTAAGTTTTAATTATTGTCTCAGAAACTTGA
ACTTGATTCAGGTAACTCTCATCCTTGTTGTGGCAAATACATCCCGTACC
TTGAGTGGTCCTAGATTCAACAGCCCTGCCTAATTCCGCCTAATTCCGAC
CCCAAATAACAGTTATGAAAAAATTCTATGTTTACAAATCTTCCTTCTCC
AAGTTGAACGATAAACTATTGCAAGGACTCTCGAAACAAAACATCTAACA
TGATGGCTATAATGTCAAGATGTCAATTAATGTGATCAAAAAAGTGTGAG
TTGTAAAAATAATTACCTCTATTATTCTGAATCTGTTGTTCGTGTTTAAA
ACGTTAACAATTTATGTAATAAAAAATTATGTTTTGTATAAGAAGCACAA
TTATTATAATTTGGTTCAAATCAATGTGTATCAAATCTTTCAGTTTAGTT
GACACTTTGGTATCTTCATTGCGTTACAGCGAAAGGTTTGTTTTTGTTTT
AGTTTGTATCTTTGAAAGACCCCATCAGATTTAGGCAGGGCTGTCGGATT
TAGGATTACTCACGGTAGATGTCTGGATTTCCTAGTGTGACTAACATTGG
CAGTTCAACCCATTTCATTTTAAAGAAAATTGGTAGCCAGTCAAAGGTGC
TGACAGTGCCCATTTAAAAAAAGCTTCTATAGCTGTGAAATGTGCCTCAC
AGGCTCCTGCAATTCAACCAAATAAAATAGAAAAAAGAAGCACTGTTAAG
CTGTCTTTAGCAGGCTAGCTCTAAAGCTCTAAAAAAGCATCTAATAACAT
GAAAACAAACCAAAACTATTAAGTGTACTTACAAACATCAATTTGTCAGA
TCTAACAAAATGAATAACGACACTGTCATCATTGACAATCGAACAAAGGA
TTTTCTGTCAAGAGCCTTGAAAACATTTCAACAGCAAGCTAAGTTCAACA
ATTTTAGTGTGGTTCGAGGATTGAGTAGAGAACACTCCCATTACGTCCGC
AAGCTCCTGCACAGGTGAAAAACTTTCTTAATCTGTCAATCATTCTCTTA
AGCGAAGAGTACGCAAAGCAATTCTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCTG
TTGTTTGGCAACTCCGCAAAAACAAACAAATACCATTTAGGCGTGAGACA
GCGAGGCACTAGCTTTTTTGTCGTGATACGTTGATTCAATTTGCGGAACG
TCTTTGATGAGGCGTAGGGTCAAGTGAATCTGTTTGTTCAGAGTTGTACG
TTTCTCGTTTCTGAAGCGTATCGTCGGCAACCAGCTGTTCATTTCGTACA
CTGGTCACAACCACAACGCAACGAAAGCAAAGAAAAGTTAAAAGCCAAAG
CTGATTTGAAAAGATTTCAGAAGAAACAGAATCTCATTCGTTTTTCAAGT
TTTTCAAGTCAACAGGTATTATGTTGATACTTTTGGTTTTCTCTTTAAAT
TTTTAAATCATTTTTGTAGTTTTTTGTATCTGTAATATATTGGGAACTTC
TTACAGTAGAGATTTTTTTTTTAAGTTATGTGTTTGTTTCTGGATGGTAT
TCAATTAACATTATCCCTTTATCCCTTTATTTTCATTTCTGGTTTTTAGT
TGTAATTTTGCTGCTCTATTCACAGCATTGGGTACAGAGTAAAAGTATGC
ATTTCTATCCTTGCACCTTTGCCAGGCAGTGCCCACTGGTGGCCTAATAG
GGCACTTTTTCTAATGTTTTTCCATTAAAAAGGCTTTTTCCACCAAAATT
TTAGAGATTTCAGGAGGGGCAGCATCTCTGTGTGAAACCCCCCCCCCTTT
GGAAAGCAAGGGAGTAGAACCATTTAAAAAATCAAAAATGGGAGGGGTCT
TTTTATAACGGGAGAGGTAAGCAATAAAGGGAGTTGAAGCTTTTAAAAGG
AGGATAAGGATTTCAGTATGAAAATTTGTACCAATTTGAGACTAAATTTT
CCTGGGAAAACATTTTTTACCGTTACTATTATTTTACAGGTTTGATATAA
AATAGGTTATGTTACACAAAAAATTATCCCTCTTTCCAAGTTCAGATAAT
CCTGGCTTTTCTTGTGTTCCAGGTTTTTTTGTAAAGAAGCCTAAGGAAAC
TAATTATGAGCACAACCAAGATTTTCTTCAATTCCAAGGGTTTGTCAAAT
AAATGTCCAAGGTTTTTGAGTAACCTGGTAGAGTGTTTAGAAAGTGTGGA
TATATTCAAACAATGAGGCCAGAGCACCAGAAAAAACCTTCACTGCTCTG
CACTGTTTGTTGTTTTCGCTGAAAAGTCTCCCCAACTTTTTGTTTGGCAT
CAGGAAATTTTTGTCAGATTTAATGATGTCAAACCATTACCAGTCATGTT
TTAGCATGATATATGGAATCAACATACGGATACAATATGAAAATTTGGCA
AAATATAGTTAGGGTTTTTTGATCTGCCTTGTGTGTGTGAATTAATATTA
TTTATTTCTTTTATTATTCAGAATTTTGAAGAAATCCTTTAATAAGCTGG
ACCAAGGTGTGCAAAACCTGCGCTAGTTTAAAAAATTGGAGCTGATCTAA
AAACATTAGAAAATTCTTTTAGAATACTTGTGCATGTGAGATATAAGTTG
TCCTCTCCTATATTACAAAAGATATCTCAACTTTTAAGAACAAACAAAGC
GTTGATATGGTAAAATTTCTTATTAAATATCTCGGCAACCTTTAGAACGA
TTTCAGAGTTGATGCCATAACAATAATTTCTGTATGCTTGGAAGATTTCT
TTGTTATTGCATCATAAATTGTTTAGATCGCACTTAATCATTCAGCAGTT
AAAAAGTATGTCCATTGCCTTTAGTACCAGATTTAAGTCTGGTTTAGCCA
GACAGGTTAGCCTGTCAAAACATTTTGGTATAACTCTAAAAGAAAACCGA
ACATGTAAAAATATATTTTATAACCCCCACAAGTTTTAATAAAGGTGCAA
AATGGAAACTCATTTGTACTTGGAAAGTTTCCAGTGGGCAATTGACCTTT
TATGCCCTTGAGGGGGTTCTTGCCAGGTGTGAACTTGAACAATAGCAACT
TCTCTGAATTTTCACTTGTTGTAAGAAATAGTAATTATTGTAATATTATC
CTTGCCTTCAGTATTTTTAAATCAGTTTAAATTTAAAAGAGCAAGCGAAA
TGAAGGTACCTCTGTTTGTGTAACCTGTGTTATTATCAGTCATATACCTG
TGTGGAAACTAATTTTTGCCGTTTTGGGTGTCGTCCAAGAAATTTAGGAA
ATCGAACTTTCATATGCTTATTCTATTACAGATTATTAATGAAATCTGTA
AAAGCCCTTTAGGAAAATGAAAGAATTTTCTTTATAATTAGTTAAGATAC
TACAAAAAGTCACCTTATAATAAGGTAACTGTCATCTAATTTTATAGTTT
AGTACTTTTGTATTGTTAATGGCTTGGTGAATTTCCCTTCCCTAACGAGC
ATAAACCTGAATGCGCATAATCGAGCGTTATTTTATGGTCCCTGGTTAGG
CTTCTCAATATTAGAATGAATTGATTTTGATTTCATTAGGTAAATTTTCC
TAAGCTTTCAAAAGTGCTTTACTTATCCCTTATTTTTTTGGGTAATATGA
TTTTAAGATTTAGAAGTTCCCAAATGACCTTTTAAAGAATGTTATATCAA
GGTAGTTTAATGCTCAATTTTTTCACTTTTGAATTTGCTATTTTCCCTTG
CATTGTTCAGGCTTGATAGTAACAAGTTCTTCGATACTTGTAGGTTTCAT
TGATAAAAGTTTGTTTGTCTTTTTTCCATTCATTACACAGAGGGTGCATA
GTGATTTTTTAATATCATTTTATGAGGAAAAAAAATTGTGTTTGAATTGA
CTTTAGAATGAATTATTAAGTTTTTAATGAAAATCTCATAAAGAGAAATC
ACAATGGCCAAAAATAAATATTTTCAAAATAAGAAATTAAGAAAGAAAAA
ATAGAAACAGTAAAATAGAACTTGAAAAAATAGAATACTATTTCAGTTTT
GCAATTAATTATTCATTGATTGTTCATTCTTATTTTTGTTCAATACAAGT
TCAATACAAATCATCAGTTCCTTCCTACTCTCACTTGACAGAATTAAATT
ATGACAATTAATATTTCAATTAGCAAATTAATGACTTTTGCATGAAATAG
ATTATTCAATTAAATCTATGTCGCACTCTTCCATTCATGAAATATATTTC
TCATTCATTTTGCAAATTATGTTTTTCATCAAGATTGTTTTTGTCTACTT
CTTATGATGCAATTTTCTTACAATGATAATTTGTTTTTGTTTTGTAGAAT
TCCATCCGGCACAACCTATCATTGAATAAATGCTTTATCAAACTTCCTCG
GACAAAAGATGACCCAGGAAAGGTAAAACAAAACCTGTCCTCTTTTGATT
TTGTTGAAACATTTATGCTAATTTGAATAAATTTCTCATCAAATCGAAAC
CCAAGAAAGTTTTTTTTAAATGAAACCCAATCTTGAACTTAAACTTACAG
CAACCATGAGACATGCTTCAGTTTTTCCTCGGAAACTCATTCTAACATAT
TCCTTTTCTTTTATCAGGGCTCTTACTGGGCAATAGACACTTCAAATATT
CATACAAATTCAGAACAAGATTCTTACAAACAATCAACAAATCAAACCAA
ATTCAAGCTAAAAAATGATACCAGAGTAAGAAGATTTCTTCTTTTTTTTT
AGTTTATTTTATTTTAAATGAAGAAACTTCTGGAAAATTATTTTTAAGAA
AAAATCCTTCATTTGAACTTTGAACTGAATGAACTTCTGAACTTTGATCT
CAATACATTACAACCTCTTTTATTTTCACAGCAACTATCACCATACGGTA
ACAACAGAGGTCATTCCCCTGGGAGGACTTCACCGATTGTTTCTCCATCA
TCGCCACAAAAGTTGAATAATTCTTTTGAATCAACAAGTAGTTCAGATTA
CTCCAATCCAAATAGTGTCGGTTCATCGCTTGAAACACCTCAAATATTTG
TCAACAATCAATCTGCTGCAGCTCTTGCCACTCAAGTAAACTCTACTAAA
CCCTCATCTCAAAAGACAGACCCCTCAAGGCAATGTGCGTTAGACAATAA
AGTTTTTGCAGAACATTTTAACTTGGACGATTTATCAGCATCCTTTAGAA
GTTTATACAAATCAGTTTTCAGCCAACAGTCTTCTTCCTCGTCCATATCC
TCGTCAGCTGGGATGAACTCGATCAGTTCTGTTTCCTCTCAAAACTCAAC
ACCCAAAGGTAAGTAGATTTTTTCAATATGAAAGCAAAATCTTATATTTT
TCCTAAGTAGTATGTTTTTGCTTCTAATCACAAGGTAACTACGCGATAGA
TGAGAACATATTCTAAAATACTGAACAATATTTAAACATATCCAAATTGT
TCTTTTTAGAAAAAAATATTTTCTCATCACAACTGCAACCAACTTCATCA
TCAGGCGGTGCCAATCATTTGTCACATTCTGGTCAATTGGCACCTGTCTC
AATCACCGAGCCGTCAAACAGCATGTCTGAGAAAGAAGTTCTAANACAAG
TAGTTCAGATTACTCCAATCCAAATAGTGTCGGTTCATCGCTTGAAACAC
CTCAAATATTTGTCAACAATCAATCTGCTGCAGCTCTTGCCACTCAAGTA
AACTCTACTAAACCCTCATCTCAAAAGACAGACCCCTCAAGGCAATGTGC
GTTAGACAATAAAGTTTTTGCAGAACATTTTAACTTGGACGATTTATCAG
CATCCTTTAGAAGTTTATACAAATCAGTTTTCAGCCAACAGTCTTCTTCC
TCGTCCATATCCTCGTCAGCTGGGATGAACTCGATCAGTTCTGTTTCCTC
TCAAAACTCAACACCCAAAGGTAAGTAGATTTTTTCAATATGAAAGCAAA
ATCTTATATTTTTCCTAAGTAGTATGTTTTTGCTTCTAATCACAAGGTAA
CTACGCGATAGATGAGAACATATTCTAAAATACTGAACAATATTTAAACA
TATCCAAATTGTTCTTTTTAGAAAAAAATATTTTCTCATCACAACTGCAA
CCAACTTCATCATCAGGCGGTGCCAATCATTTGTCACATTCTGGTCAATT
GGCACCTGTCTCAATCACCGAGCCGTCAAACAGCATGTCTGAGAAAGAAG
TTCTAAGTACCATGGAAGCCTTAATGTCAAGTATGAATTCTGGCGACTGG
GGAAGCATTATGCCTGATCAGTTTTACAGTTTGATAGATTCGTTACAGGA
GATGGACGGGCTTGACCAGAAAGATATAGACTCTTTAGAAGAGTCGTATA
CAAACTATTTGAAATTGCAAGGAACATTTGATTACCTTGATAATGATGAT
GTTGAATTAAAAGCAGAACTTCTTCAACCTTCTCATCACAATATTCAACA
AAATAATTTCAGTACAATCCCTGAAAATCATGTCAGCCCACATGGTAGTC
CTTACACAAGTCCACTACCACCGCCTACTTTACAGCCAAATCCAAATATG
TTAAACCATGGTCGAATGAGCCCTGCAAGTTCTGCAACATCACCAATGCC
TACTTTAATGGACAGTAATGATTTAAACCACGTGTTACAGCCTATGTATG
CAAATTCTATGAGCCCTATTAATCCTAACAGTGTCTTAGGTAAATCAACA
TCAAGCAATGGTTCAGTTGGAAGAAACATGGCAATGAATCCGCCAGTTTC
AAATCAAATGAATGCTCGATACTCCATGAATGCAAACAGCCCAATGCAAC
CATCACCCTTGAATCATTACAGCCATTCTCCATCTACTTCTCCCCAACCT
CCGCCCTCTTACTCACCTCAACCACCTCAATACACCAACCAAGGTTCGCC
AGCTATGCAAATGAACCATTCCAATGAAATGAATCGTGCTTTAATGCAAG
GTAGTCCACAACCACCTCCGCTCTACCAACAACCACAGCCGCCAAGACAA
CCATCGCCAAGAACGGCTCATCAACAACCACGATCACAGAATCAACAATC
GAGGAAACTTTACCAGCATGTTGAAGATGAAGAAGATTTTGATTGGAATT
CTCTCCTATGATGCAAGAAATAACAAAATATTAGTTAAATCCCTTAAATA
TTCAAGAAATGGTTCCACCCACACCAGATTATGCATACACGTTATATTAC
AATACAATACAAAAAATGATTATTATGAATTACCACATTACCAGGGAAGG
AATGAAATCCAATTGCTCAATGATTTGAAAAATATAGTCCAACTAGAATC
AAAAAATATTCAAATTTAAAGTAAAATTTAATGTGATTGGATATGTTGAG
TATTGGTTGAACACTCTTGCATCCTCAACAAAACTATTAATACTGGTTTT
CAGTGAGGGTAATTCAGTTTTTATTTGCACTTATTTTTATGACGACCTCC
TCTGCAAATGTATATAGATTAAGTTTTTTGGCAGGAAACCCAGGGTGCTG
GAAACAGATCCTGGCATCAGAAGAAAACTAAAACTGAAATGGAATTTTCC
TTTAACAAAATGTTGAGAAAAAATGTAAAACGGAAAAATTATGTAGTATA
TTTATATTTTGAAAAAAACAAGTATTCTTACAGTACTGTATTTATATTTT
TGCTTTTATTGTTTTAGTTTTTTTTGTTTTATGTTGTCTTGAAATGGAAC
ATTTTGCGCAGATTGTTTTCTTAATTTTTCATGATGGAGTAGAAACTGGC
TCAAGTTCTGAACCATATACAGCCGAGTCTCCATGATTCGATCAACTCTA
CATTACATTTCGATCGAGTTTTATGGTCCCTTCAATTAACAATGCCTCAT
AAATCTTACTCCGTAACTCGAAATTTCCTTAACTCTAACAAACCTGCGTC
AGAGTTAAAGAGACTCCATTTTATCACCAATCACGACATGAAATTAACTA
TATTGCCCTTTTGTGTTTACTGCGTGTGCAAGATTTCCATTACTCCTTTT
TTTGTTATTTTTTGCTCCAAGTTTTTATTAGGTGACAATTTTTGCAGCTA
TTTATTATTTTGATACAGTGATACTATTTTTTCTTTATAGTGGGTTTTAA
ATAATGTGCTGGTGGTACAAACTTAACAAACAACCAAAAATAACGGTGTA
GGCCAATCTAAAAAGGCTTCTTGATTGACATATCGCCAAGGGACATTTTC
CTTGATTCTCATTTTTTCGGCTAATTGAAAAATGATTCGCAGATAACCTA
AACCCTCTTTCAATACAATAAATGACAATATGTCATTTGTAGGCTTTTCT
GCCTTAAAATCACCTCACTTACTAGTTGATTTAATCGAATAGATTCTACG
TTGTTTTAATGAAACTTGGTCTACCAATTTTTGGTTAGTTTGTTCATTTG
CATGAATTTCAAGAATTTTTTTTCTTTTTGTAAATAGGAACTTTTTGTAT
ATGATGAATTTTTATGCATTTGGTTTGTTGTCTGTTCTATTCTCTTATGA
TCTTTAAAAAAGTCGGAAAGAATTGAAGAGCTCCGTGATGACATATTGTT
GAGTTTTGAATTTTTTTGAATGGCA

Coding sequence (CDS) from alignment at scaffold_172:88634..99408-

>TCONS_00050466 ID=TCONS_00050466|Name=TCONS_00050466|organism=Clytia hemisphaerica|type=CDS|length=5910bp|location=Sequence derived from alignment at scaffold_172:88634..99408- (Clytia hemisphaerica)
AAAAAAATATTTTCTCATCACAACTGCAACCAACTTCATCATCAGGCGGT
GCCAATCATTTGTCACATTCTGGTCAATTGGCACCTGTCTCAATCACCGA
GCCGTCAAACAGCATGTCTGAGAAAGAAGTTCTAANACAAGTAGTTCAGA
TTACTCCAATCCAAATAGTGTCGGTTCATCGCTTGAAACACCTCAAATAT
TTGTCAACAATCAATCTGCTGCAGCTCTTGCCACTCAAGTAACAACTATC
ACCATACGGTAACAACAGAGGTCATTCCCCTGGGAGGACTTCACCGATTG
TTTCTCCATCATCGCCACAAAAGTTGAATAATTCTTTTGAATCAACAAGT
AGTTCAGATTACTCCAATCCAAATAGTGTCGGTTCATCGCTTGAAACACC
TCAAATATTTGTCAACAATCAATCTGCTGCAGCTCTTGCCACTCAAGTAA
ACTCTACTAAACCCTCATCTCAAAAGACAGACCCCTCAAGGCAATGTGCG
TTAGACAATAAAGTTTTTGCAGAACATTTTAACTTGGACGATTTATCAGC
ATCCTTTAGAAGTTTATACAAATCAGTTTTCAGCCAACAGTCTTCTTCCT
CGTCCATATCCTCGTCAGCTGGGATGAACTCGATCAGTTCTGTTTCCTCT
CAAAACTCAACACCCAAAGGGCTCTTACTGGGCAATAGACACTTCAAATA
TTCATACAAATTCAGAACAAGATTCTTACAAACAATCAACAAATCAAACC
AAATTCAAGCTAAAAAATGATACCAGAAATTCCATCCGGCACAACCTATC
ATTGAATAAATGCTTTATCAAACTTCCTCGGACAAAAGATGACCCAGGAA
AGATGGCGAAGCTGAACTCGAGTCTGACAGCCATGGATTGGCTTCCTCAA
CTCTCTGTTGGGGGAGCCTTGACAACTGGTAACCCTGCGAACATTAATCA
AACACAACCCATGAAGGCTACCCAACGTGTACCCTTTGGACAATTTGATG
TAACTGCAAAATATGATGGCACTTCAGAACGATTTGGAAAGTCAAAACCT
CCATACAGTTATGCAAATCTGATAGCATTTGCTATTAACTCTACTGCTAA
GAATAAAATGACTCTATCAGAAATATATCAATGGATATCTGAAAGTTTTC
CTTACTATAATGAAACTAGCAATGGCTGGAAGAAAAAAATATTTTCTCAT
CACAACTGCAACCAACTTCATCATCAGGCGGTGCCAATCATTTGTCACAT
TCTGGTCAATTGGCACCTGTCTCAATCACCGAGCCGTCAAACAGCATGTC
TGAGAAAGAAGTTCTAANACAAGTAGTTCAGATTACTCCAATCCAAATAG
TGTCGGTTCATCGCTTGAAACACCTCAAATATTTGTCAACAATCAATCTG
CTGCAGCTCTTGCCACTCAAGTAACAACTATCACCATACGGTAACAACAG
AGGTCATTCCCCTGGGAGGACTTCACCGATTGTTTCTCCATCATCGCCAC
AAAAGTTGAATAATTCTTTTGAATCAACAAGTAGTTCAGATTACTCCAAT
CCAAATAGTGTCGGTTCATCGCTTGAAACACCTCAAATATTTGTCAACAA
TCAATCTGCTGCAGCTCTTGCCACTCAAGTAAACTCTACTAAACCCTCAT
CTCAAAAGACAGACCCCTCAAGGCAATGTGCGTTAGACAATAAAGTTTTT
GCAGAACATTTTAACTTGGACGATTTATCAGCATCCTTTAGAAGTTTATA
CAAATCAGTTTTCAGCCAACAGTCTTCTTCCTCGTCCATATCCTCGTCAG
CTGGGATGAACTCGATCAGTTCTGTTTCCTCTCAAAACTCAACACCCAAA
GGGCTCTTACTGGGCAATAGACACTTCAAATATTCATACAAATTCAGAAC
AAGATTCTTACAAACAATCAACAAATCAAACCAAATTCAAGCTAAAAAAT
GATACCAGAAATTCCATCCGGCACAACCTATCATTGAATAAATGCTTTAT
CAAACTTCCTCGGACAAAAGATGACCCAGGAAAGATGGCGAAGCTGAACT
CGAGTCTGACAGCCATGGATTGGCTTCCTCAACTCTCTGTTGGGGGAGCC
TTGACAACTGGTAACCCTGCGAACATTAATCAAACACAACCCATGAAGGC
TACCCAACGTGTACCCTTTGGACAATTTGATGTAACTGCAAAATATGATG
GCACTTCAGAACGATTTGGAAAGTCAAAACCTCCATACAGTTATGCAAAT
CTGATAGCATTTGCTATTAACTCTACTGCTAAGAATAAAATGACTCTATC
AGAAATATATCAATGGATATCTGAAAGTTTTCCTTACTATAATGAAACTA
GCAATGGCTGGAAGAAAAAAATATTTTCTCATCACAACTGCAACCAACTT
CATCATCAGGCGGTGCCAATCATTTGTCACATTCTGGTCAATTGGCACCT
GTCTCAATCACCGAGCCGTCAAACAGCATGTCTGAGAAAGAAGTTCTAAN
ACAAGTAGTTCAGATTACTCCAATCCAAATAGTGTCGGTTCATCGCTTGA
AACACCTCAAATATTTGTCAACAATCAATCTGCTGCAGCTCTTGCCACTC
AAGTAACAACTATCACCATACGGTAACAACAGAGGTCATTCCCCTGGGAG
GACTTCACCGATTGTTTCTCCATCATCGCCACAAAAGTTGAATAATTCTT
TTGAATCAACAAGTAGTTCAGATTACTCCAATCCAAATAGTGTCGGTTCA
TCGCTTGAAACACCTCAAATATTTGTCAACAATCAATCTGCTGCAGCTCT
TGCCACTCAAGTAAACTCTACTAAACCCTCATCTCAAAAGACAGACCCCT
CAAGGCAATGTGCGTTAGACAATAAAGTTTTTGCAGAACATTTTAACTTG
GACGATTTATCAGCATCCTTTAGAAGTTTATACAAATCAGTTTTCAGCCA
ACAGTCTTCTTCCTCGTCCATATCCTCGTCAGCTGGGATGAACTCGATCA
GTTCTGTTTCCTCTCAAAACTCAACACCCAAAGGGCTCTTACTGGGCAAT
AGACACTTCAAATATTCATACAAATTCAGAACAAGATTCTTACAAACAAT
CAACAAATCAAACCAAATTCAAGCTAAAAAATGATACCAGAAATTCCATC
CGGCACAACCTATCATTGAATAAATGCTTTATCAAACTTCCTCGGACAAA
AGATGACCCAGGAAAGATGGCGAAGCTGAACTCGAGTCTGACAGCCATGG
ATTGGCTTCCTCAACTCTCTGTTGGGGGAGCCTTGACAACTGGTAACCCT
GCGAACATTAATCAAACACAACCCATGAAGGCTACCCAACGTGTACCCTT
TGGACAATTTGATGTAACTGCAAAATATGATGGCACTTCAGAACGATTTG
GAAAGTCAAAACCTCCATACAGTTATGCAAATCTGATAGCATTTGCTATT
AACTCTACTGCTAAGAATAAAATGACTCTATCAGAAATATATCAATGGAT
ATCTGAAAGTTTTCCTTACTATAATGAAACTAGCAATGGCTGGAAGAAAA
AAATATTTTCTCATCACAACTGCAACCAACTTCATCATCAGGCGGTGCCA
ATCATTTGTCACATTCTGGTCAATTGGCACCTGTCTCAATCACCGAGCCG
TCAAACAGCATGTCTGAGAAAGAAGTTCTAANACAAGTAGTTCAGATTAC
TCCAATCCAAATAGTGTCGGTTCATCGCTTGAAACACCTCAAATATTTGT
CAACAATCAATCTGCTGCAGCTCTTGCCACTCAAGTAACAACTATCACCA
TACGGTAACAACAGAGGTCATTCCCCTGGGAGGACTTCACCGATTGTTTC
TCCATCATCGCCACAAAAGTTGAATAATTCTTTTGAATCAACAAGTAGTT
CAGATTACTCCAATCCAAATAGTGTCGGTTCATCGCTTGAAACACCTCAA
ATATTTGTCAACAATCAATCTGCTGCAGCTCTTGCCACTCAAGTAAACTC
TACTAAACCCTCATCTCAAAAGACAGACCCCTCAAGGCAATGTGCGTTAG
ACAATAAAGTTTTTGCAGAACATTTTAACTTGGACGATTTATCAGCATCC
TTTAGAAGTTTATACAAATCAGTTTTCAGCCAACAGTCTTCTTCCTCGTC
CATATCCTCGTCAGCTGGGATGAACTCGATCAGTTCTGTTTCCTCTCAAA
ACTCAACACCCAAAGGGCTCTTACTGGGCAATAGACACTTCAAATATTCA
TACAAATTCAGAACAAGATTCTTACAAACAATCAACAAATCAAACCAAAT
TCAAGCTAAAAAATGATACCAGAAATTCCATCCGGCACAACCTATCATTG
AATAAATGCTTTATCAAACTTCCTCGGACAAAAGATGACCCAGGAAAGAT
GGCGAAGCTGAACTCGAGTCTGACAGCCATGGATTGGCTTCCTCAACTCT
CTGTTGGGGGAGCCTTGACAACTGGTAACCCTGCGAACATTAATCAAACA
CAACCCATGAAGGCTACCCAACGTGTACCCTTTGGACAATTTGATGTAAC
TGCAAAATATGATGGCACTTCAGAACGATTTGGAAAGTCAAAACCTCCAT
ACAGTTATGCAAATCTGATAGCATTTGCTATTAACTCTACTGCTAAGAAT
AAAATGACTCTATCAGAAATATATCAATGGATATCTGAAAGTTTTCCTTA
CTATAATGAAACTAGCAATGGCTGGAAGAAAAAAATATTTTCTCATCACA
ACTGCAACCAACTTCATCATCAGGCGGTGCCAATCATTTGTCACATTCTG
GTCAATTGGCACCTGTCTCAATCACCGAGCCGTCAAACAGCATGTCTGAG
AAAGAAGTTCTAANACAAGTAGTTCAGATTACTCCAATCCAAATAGTGTC
GGTTCATCGCTTGAAACACCTCAAATATTTGTCAACAATCAATCTGCTGC
AGCTCTTGCCACTCAAGTAACAACTATCACCATACGGTAACAACAGAGGT
CATTCCCCTGGGAGGACTTCACCGATTGTTTCTCCATCATCGCCACAAAA
GTTGAATAATTCTTTTGAATCAACAAGTAGTTCAGATTACTCCAATCCAA
ATAGTGTCGGTTCATCGCTTGAAACACCTCAAATATTTGTCAACAATCAA
TCTGCTGCAGCTCTTGCCACTCAAGTAAACTCTACTAAACCCTCATCTCA
AAAGACAGACCCCTCAAGGCAATGTGCGTTAGACAATAAAGTTTTTGCAG
AACATTTTAACTTGGACGATTTATCAGCATCCTTTAGAAGTTTATACAAA
TCAGTTTTCAGCCAACAGTCTTCTTCCTCGTCCATATCCTCGTCAGCTGG
GATGAACTCGATCAGTTCTGTTTCCTCTCAAAACTCAACACCCAAAGGGC
TCTTACTGGGCAATAGACACTTCAAATATTCATACAAATTCAGAACAAGA
TTCTTACAAACAATCAACAAATCAAACCAAATTCAAGCTAAAAAATGATA
CCAGAAATTCCATCCGGCACAACCTATCATTGAATAAATGCTTTATCAAA
CTTCCTCGGACAAAAGATGACCCAGGAAAGATGGCGAAGCTGAACTCGAG
TCTGACAGCCATGGATTGGCTTCCTCAACTCTCTGTTGGGGGAGCCTTGA
CAACTGGTAACCCTGCGAACATTAATCAAACACAACCCATGAAGGCTACC
CAACGTGTACCCTTTGGACAATTTGATGTAACTGCAAAATATGATGGCAC
TTCAGAACGATTTGGAAAGTCAAAACCTCCATACAGTTATGCAAATCTGA
TAGCATTTGCTATTAACTCTACTGCTAAGAATAAAATGACTCTATCAGAA
ATATATCAATGGATATCTGAAAGTTTTCCTTACTATAATGAAACTAGCAA
TGGCTGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031959XLOC_031959Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050466-exon-scaffold_172-1575043694:98788..99408TCONS_00050466-exon-scaffold_172-1575043694:98788..99408Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1575043694:92787..92861TCONS_00050466-exon-scaffold_172-1575043694:92787..92861Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1575043694:92484..92591TCONS_00050466-exon-scaffold_172-1575043694:92484..92591Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1575043694:91901..92327TCONS_00050466-exon-scaffold_172-1575043694:91901..92327Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1575043694:91289..91749TCONS_00050466-exon-scaffold_172-1575043694:91289..91749Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1575043694:88634..91137TCONS_00050466-exon-scaffold_172-1575043694:88634..91137Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1510915933:98788..99408TCONS_00050466-exon-scaffold_172-1510915933:98788..99408Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1510915933:92787..92861TCONS_00050466-exon-scaffold_172-1510915933:92787..92861Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1510915933:92484..92591TCONS_00050466-exon-scaffold_172-1510915933:92484..92591Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1510915933:91901..92327TCONS_00050466-exon-scaffold_172-1510915933:91901..92327Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1510915933:91289..91749TCONS_00050466-exon-scaffold_172-1510915933:91289..91749Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1510915933:88634..91137TCONS_00050466-exon-scaffold_172-1510915933:88634..91137Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1491911889:98788..99408TCONS_00050466-exon-scaffold_172-1491911889:98788..99408Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1491911889:92787..92861TCONS_00050466-exon-scaffold_172-1491911889:92787..92861Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1491911889:92484..92591TCONS_00050466-exon-scaffold_172-1491911889:92484..92591Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1491911889:91901..92327TCONS_00050466-exon-scaffold_172-1491911889:91901..92327Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1491911889:91289..91749TCONS_00050466-exon-scaffold_172-1491911889:91289..91749Clytia hemisphaericaexon
TCONS_00050466-exon-scaffold_172-1491911889:88634..91137TCONS_00050466-exon-scaffold_172-1491911889:88634..91137Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00050466-proteinTCONS_00050466-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_172supercontigscaffold_172:88634..99408 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.0648512	0	0	0	0.0511825	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001766Fork_head_dom
IPR011991WHTH_DNA-bd_dom
IPR030456TF_fork_head_CS_2
IPR018122TF_fork_head_CS_1
Vocabulary: Molecular Function
TermDefinition
GO:0003700transcription factor activity, sequence-specific DNA binding
GO:0043565sequence-specific DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0043565 sequence-specific DNA binding
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Blast
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BLAST of TCONS_00050466 vs. Swiss-Prot (Human)
Match: FOXJ3 (Forkhead box protein J3 OS=Homo sapiens GN=FOXJ3 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 7.816e-43
Identity = 84/147 (57.14%), Postives = 102/147 (69.39%), Query Frame = 1 
Query:  295 AKLNSSLTAMDWLPQLSVGGALTTGNPA-NINQTQPMKATQRVP----FGQFDVTAKYDGTSERFGKSKPPYSYANLIAFAINSTAKNKMTLSEIYQWISESFPYYNETSNGWKNSIRHNLSLNKCFIKLPRTKDDPGKGSYWAIDT 720
            ++L SSLT+MDWLPQL++  A+   +   N + T   K    +       Q +V    DG        KPPYSYA+LI FAINS+ K KMTLSEIYQWI ++FPYY E  +GWKNSIRHNLSLNKCF+K+PR+KDDPGKGSYWAIDT
Sbjct:   18 SELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGISKKNALLDPNTTLDQEEVQQHKDG--------KPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAIDT 156
The following BLAST results are available for this feature:
BLAST of TCONS_00050466 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
FOXJ37.816e-4357.14Forkhead box protein J3 OS=Homo sapiens GN=FOXJ3 P... [more]
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