|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000230:207090..214843+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00113648 ID=BlTCONS00113648|Name=BlTCONS00113648|organism=Branchiostoma lanceolatum|type=mRNA|length=7754bp|location=Sequence derived from alignment at Sc0000230:207090..214843+ (Branchiostoma lanceolatum) CAGGTATGGAGGAGGCTGTAGACCAGTTTTCTATACTTGATCCTGCTAAA
GGATGCCTTTTGTTTGTAACTATATAGTGCAATGGTAGTTGTTGGTACAT
GTAAGTGCACTCTCCTGTGGCTTTTATTTAAAGTGTTCCTATTAAAAAGC
AGATTGTAGGATGACCAGACAGTAGAACATGATCATGAAGTAAACAATGG
ATTTCAGGCCTCAAAATTAACTTTTTTCCCTACTGTCCCAGCATTGTCCC
AAAAATAAATTTCAACTGTCCCGAAGTGAGGATGGACTGTCCCAACCCTA
TTTTCAGAAATTATGTATTACAACAACTGTAAAGCTCAGTCAGAGTACAG
TATTGCTGTGTAAGCTTATTGTCCATTGAAATAATCAACTCAGATTCAAA
CTTATCTTGTTTTTTTTATTAGACAACAACAAATTTATTACATTATATCT
TATGGATAGTAGTGCAACGTCCACTGCACATTTACAGGTAGACCACTTGC
TGCAGTGCCTTATCATGTAACAAGTGGCAAGTGGGAACTGGGAACTTCAA
AAAGTCATTTTAAGAACATAATCTTTTTCTGAAAATAAACAGTACATAGT
GAGTCACTGAGTGACACTAGTCTAGTACATTTACAGGGACCACTTGTACT
TTATCAGTGGTAGTTAGGGAAGAAAAGAATGAAATATTCTTCAGATTGTC
TCTTTTATTGGTACACAGTGTAACAACAATAGATAGTACACTAGTCTAGT
ACAGTCAAACGTGTCTAAGAAGACCACCCAGGGGACCGATAGAATTCGGG
CGTCTTGGACACGTGGTCTTCTTACAAATAGAGATTGACATTAGTCAAGA
CAGAGGCACCGATTTCAACGTCATGATTTATTAACAAGAATGCTAAACAA
GATGCACTTAATCGTTTAACAGCAAAGCTCGTCTCCATTATACCGCTTTC
GGATTCCACATTTACGATATTTCTTCCAAATTTTCCTGGATTATTTTGCT
AAAATTCATGAAAATTCGCTTATTTTTGTGGCGAGCGGCGTCACTTTTAC
CATCGGCATTGTCTGTAAAAACTTGTGAATGGAGTCGATACCGCATAACA
ATGGGTCATTTCGCTACAACGCTAACGTTAAAAACAAAGGATCGATGTTT
TGGGTTGAGTATCCGACACCCTACTGACGTTTTAAAATACAATTTTCATG
TAAACAACACCAACTGCATCTGTTTACACCGTGAGTAGGTCAGAAAATAA
GTTTACTGGCGAGTGTTGGCGAAAATTCTTACCGGGCACATGGTCGCCAC
AAGCGGGAACCTTCTTTCACAAAATCGGCGACGCCGCAGATTACCGGATC
ATTATGGCATTGTTACCCATGTAAAGATCGTGTATGGTTAAGTTTTTCTC
CTAGTGTGAGTTTTAAACTCCCAAACCCGCCCAAACACCAGAAATTTGCA
GAGAAATACAAAAATATAGCCTCTAGCGTGCCTGTACATGTAGAAACGCA
TTGTTCATTTAGTTAGGATACTTCACTAGAGGCATGGGTGAGCAGTTACA
AAAAAAAAAAATCCACGTATTATCTTCAAAACAAAATGTTATCAAGTCAA
GCTTTCTTTATGTATATATTTTCTTTATATAAAGAATGTTTTTGACGAAA
TAAGTTTAAATTTTGAATGTAGAGTAAAATCACACCACACGCAATAGTTC
CACCCACATTGCAGTAGACTATCCCAATGACCTATGACCACTGGCGCCAT
CTTGGATTTCATCGCTGCAAAACAGGCCGATTTACCGTGATTTCCCGCAA
CTTACCATTAAAAACTGACGTCGCCACACATTTGAAAATGACGTGGTCGT
CTTAGATTACGTTTTGGTCGCTTGCGGTCCGGATCCGGTCTACCGCGGGG
AGATCGGACAGTCTGATGTTGATTAGTTGATTATTTTCCTATTGTCCCAA
AAGTGTCCCAAATAGATTTTTCAGTTGTCCCGGCCTAAATTTTAGTGGCC
CCGGGACATCGGGACATGGTTAAGATCGAGCCCTGGTTGTTCTCATACTA
CAGAATCCTGACAGCAGAGGGTTCATGGCTAGGGCAGAGCTGCAGAGGGA
GGCCCAACCTCTGTGTGACAAGTCATTTACCCTGGTAAGCACATGGGCTT
TTCTGTTTGTAAATTACCAAAAATTCTGGTGAGTTGTTTTTTTAGTTGGA
GAACAGTTTAATTTGTAATTATACATAAAGTGTTTGTTGATTTGCTTTAG
TGTTGAGGATAGTATTTTACATCACAGGGCATTCATGTATTGATACATGT
AGTACTGCAGTTTAAATGGGTACAAGACAAGAGTCTGAAACTAGCTATCT
CATACCATTCTTCAGCCAGACCCTGGCAGCCACTATACAGCATGGTCTTC
AATGGGTGGACTTGTGAAGAAGGGACTGGTCATCAAGGACAGCAACCCTG
CCAAGTATGTACTAACCTTCATATCTTTAAGACTTTATGGTAAACTTTAT
ATTATAAAATGCACAAAAGTACTTCATTTTCCTATTCAAGGATTCATTTA
TGTTGAAAGCCATTGAGGTTTAGTAAAACAAATCTTTATGTGCTTAGATG
AGCCTAAGTTACAAAGGTAATTTGCATGTAGTTTAAAGTTGATTTAAAAT
GAATATTTGTTGCAATTTCTGTCACCCAGATATTACATCACAGACAAAGG
AAGTGAGCTGGCCCATAAGTTAGAGCTGATTGGTGAGCAGGGAGTGAGTG
GGTCCAGCCCACAGGAAGACAGTGAGGACATGGCTTTTACCCTGACAGGA
CCAGGGAATGCCGCACTAACAGCTGGCCTTCATGCTGGAAGGTACATTGT
GTGTTAGGCATCAGCTTCTGATGGGCACCTACCGTACCTTTACTGATAAA
GTGATTCGGAAACACTGCTCATTGAAACTTACTATACATGGTCTTTGTCT
TGTCTTTCCAGAGACTGAAAGTCATTTCTGTTTGCGGGACTTAATTTCAC
AATAGTAGAAGAAAGTTTTGGTTTTCTCAGTGTATTTAGTCTGTGGTTGA
CACAATTTTGTAGTACAGTAGTGATACAATGAAATTGCATATTGGGCATA
CATGTGTATTTGCAGTGTTATTTTGCAGAGAGGGAGACGTCACCACGGAN
GTGTCATTTTGCAGAGAGGGAGCCGTCACCACGGAAATTTAACTACTAGT
ACCACAGGCATTTCAAGATTGACACTAATTTGTGAACACATCTGTATAAT
ACCTGTAACACTGGTGTCAGCCGCTCTGACCATGTATTGACTTTTACTTG
ACAGGACAGAGAGTTGTATAGATGTGACATCTTTGCCAGCTATGGATGTT
AGTCCTAACATGAGGAGAGATGTTGGTCAGGCTGCCAGGGAGACTGTCGT
GTCTGAGATGGAAACTGATGGTGAGGGCCCAATTTTGTATGAGCTTAGCT
GTATCCATGATGCATTTGTAATATGGACACTGGAAGGTTTTAATTTTTTT
GTTCATAAGTCTGAAAATTACTCTGAATATATTTATACTAAAAAGTTTTC
CAGGACAGATTAATTTGATAAGATTGACTTTTATGAACCTTGGAAACTGT
CTGATAATCTAAGACCAAATGTAAGGGTTGATTCTCACTGGATCACTCAC
CTGTGTCTGCACTTTGATAGCATCCTTTTCAGTAAGCCCATCATCATTCT
CTCCATCTTTATTCACAGAATCACAAGGAAGTGTCACAAGTAGATATAAA
GATGACAGTAAATCAAGGCAGCCCCTGTTCACTCTCTCTCCAGGTCAGTG
GAGTTGTGTCTTCTTTATGGTCTTCTTTCAATATTTTTGCTTTGTAGTGG
GTTTATATCTATGTAGCTGCTGACAGTTCACAAATCCACCTTTGTTTATA
TTTGTACTATGCCTCTTGTAGGTGAGTTTGAGGTGGTGTTGTGTGTGGAC
ACTCAGGAGACCACTGGAGGGTAAGCAATGCTTAAAGTCATCCTCTATTG
TACCAACTTAGTCACCATTCACACATTTCAAAGCTGTCTATAGAGTAAGT
ACGGGGCCACTGTATTCCTTTAAAAAGCATGGCTTTCTCTTCCTAGTCGG
GAGACTACAGCTATCATTTCAGAAAACAAGCTAGTCTGACCATCTGACAA
CAGGATGAGTGTACAGAACTTACAAGTCAGTTGTTTCCACAGTGCTGCAG
GCAGCAGGAAGGTGAACCTGGTGCCAGAGCTGCAGAAGAACAGTGTGAGG
TGTGATGTGAGGAATCTGCACGTCGGAGACTTCCTCTGGGTGGCCCGGGA
GAAAGTCAAACGTCTGCCAGGTCAGAGATTTAGGGTTTACGGTGCTTTAA
ATAAAGCAAACTGATGTGAAATTCTGAAGTTTTTACATTGTGTGAGTGGA
ATAATTCTGGAGATGTTTGGAATTCTTGTCTGTCGTGTCAACACAGGCCA
ACTCCATCCACCCTTACCCAGAGAGCTGGTCCTGGACTATGTGGTAGAGC
GGAAGAGAATGGATGATCTTGCGAGCAGTATCAAGGGTAGCAGATTCAAG
GAGCAAAAGGTGACAAATAAAGACAAACCTAATCCTGTCAAGTTTACGTC
TCCTTAAGCAGTACCATGCATTAGACACAATATCATCAACTAGGGGTATT
GTTATCCAGCTGGACAAAAATATGATTGAGACCATATTGAGAAATGCTAC
ACTAGTATTAGTGCAAGATGCTCATTTTGCCGACAACATGTCAGTTTCCC
ATTTGTTCTGATTGTGCAGTTCCGACTGAAGATGAGTGGACTGAGGAAAC
CCATCTACCTGGTGGAAGACTTTGGCTCATCAGCAGCACACTTCTGTCTT
CCTGAAGCGACTCTACAACAAGCAGTAGTTAACACTCAGGTTTGGATCCA
TTTATGTAGTCATAAATGTTTGATGTTTAATTTTTAAGATACTGGGTCAC
TGAGTAATAAGTGGAGCACTATGCTGGAAGGAATGGCTGGCAACAGAGCA
TTTTTCAAAGGATTGTTATGTTTTAGTCTAGAGGTTGCAAACCTATGTCC
ATGTACACTCAACTGCTCACTTCATGTCCTAGTAAGTGTCATGTTTTTCA
TGGATTAACTTTAGGACAGCTTACATATCTTAGATATATGGAACTGTAGT
TATGTACCATCCATACTGTGTACCTTGTACAATTGTTGCGCAATAAAGTT
ATCTTATCTTCAGTTCCCGTGATTGTTTCAGGTGACCGATGGTTTCTTTG
TGAAGAGGACAGCAGACATGAAGGAGTCTGTCACCTACCTCACATTGATG
ACTCATTATCTGCAGAGCCTCTATGCTGTAAGTTACACTTCCTATGTAAC
AAATGTATCAAGACTGTCTCCAGGACCCGTCTCTTCATCCCAGGACGGAA
ATTAGTTTGTTGGGACAAAATCATTTCAACCTGTCCATCAAAAAAAATCT
AAACTTCATGACATGAGATTGATGAAAATGTATTTTTATAAGCTCAAAAT
GGCAGATTTGACAACAAAAATTAACAACATGACACATGGGCTCTGATTCC
AAACAATGGGACAGACAAAAATTTAAAGCTGGAGACAGCCCTAAAGTGTG
TGTTGAAATTGAATGCCCTTCAATTTTGTATTAGGTCTTATCTTCAACTA
TTTCATTAAACTATCATTGTACTGTTGATTCCTGGTTGAAGGGGAAGACC
CTTGAGGGCTACAGCCGGGAAGATCTGCAGGATCAGTCATCAGACCTGAA
CCTCAATGCCAGTGTGATCAAACTGCTGACTTTTCCTGAATTCAATGAGA
CATCAGTAAAGAACAAGGTAAGGAATTGTTTTAGAAATGGTTCCTGCAAC
TTGAAATGTTGATGGTTTTATTGTTTCATGACAAGTTTCACAAAACCAAT
CCCCTTCACATAATTACCAAGACGAAATAAAAAAGCTCTTTAAAAGGGTT
GTCACTTCCAGGTTTTGCTACAGTTATTCTAATAAGAAAAACAGAACTGG
CTTCAGCTTGGGCTTTATTTTTAGGAAAAGAGACCTGTACAGTACCCAAG
GAAGAGACTGATCAAATGTGGGAGAAGGTAAAAATTGCACAAATATTTCA
AGTCAGAAGCCTAATCTCAACATGGCATTCTGCTGGACTTTTAGCAAAGC
TTTAAGTCAGGCAATACAGCTCAAAGCTGTGGCCACTGCAGGTTAGCATT
GCTTAATCTGCAGCTTTGTGGCATGTGACAATCACATCAGGTTGATGCCA
GACCTTGTTCACCAGGTGATCTCTGTGAAGGAGATGTTTGCCAAGCAGCT
GATGCAGTTCCATGGCATGTCCAAGGAAAAGGTGGCAGCAGTGGTCAACA
CATACCCTACTCCTGTGGCGTACGTATATATGATAAGGATATATGCTAGT
TTGTACCATATCTTATGACTCTTTATGAATGATTTAATCAAAGTGTATGA
ATGTGGTTTCCTTGCATTTGATACAGAGCTGTCTCTAGCTTTAAATTATT
TTCTGCCCCACTCATTGTTTGGGAGCCCATGTTGTTAATTTTCCTTGTCA
TTTTAAGCTTAGGAAAATACATTTCATCAGTTTCATGTCACACAGTTCAA
ATCTTTTGGACCGTTGGGTTGAAATTTATGTCCAGTCCAATAGGTAAATT
TACATCCCGGGTCTAAGGAACAGATCCTAGAGACAGCCCTGATTTGATAA
TTTGATGTTATTTCATTTTTTTCCCAACTTGTTTTCTCACCAGCCTGTTG
CAGTTATACTCCAGGTGTGGTTCAGCTGCCGAGAGGGAAAGGATGCTGGC
ACCCCTCAAGTATGGGCCCACTAAAAGGTGATGACATTCAAAAGTATCTG
CTGGGGTCTTCCTGTAACTAGCCGTTTTGTATTTGTTCTAAAGATAAGAT
TGCAATGTTTTACCAGAAATTTCTTGTGTTGGCAGGAATCTCGGACCAGC
TCTCAGCAAAGCAGTGTTCCAGCTATACTGCAGCACTTCAAACCTACAGT
GACCTCCACAGTTCAGCAGAATGAGACAACGGTAACATTACAGATGTGTA
ACATTACAGATGTGTAACATTACAGATGTGTAACATTACAGATGTGTAAC
ATTACAGATGTGTAACATTACAGATGTGTAACATTACAGATGTGACATCA
AGCCTGTGTGGTTATCAGGTACCCATAGGCCTGTCGAAACATCTGAGACA
TTTAAATCATGGTCAGAAAGCGACTTTGTTGTGGTTGAAGCTGTTTGAAT
GAGGCAATAATAACAGTCTTGCTACTCAGAGATTTCATTCTCATATATGT
ATCTTTGAATACAAACCATGACAAAGGAGACAAGGAAATAACTTTAAAGG
GATAGATGTATTTATGCCTTTTGAAGGCACTTCAGAACTCTTAATACAAC
CGCAAGTGTACAGCAGAAGAGTACATATGTAAGTGTTAACTAACACTTAT
ATGCGTACATGTATGTCAATGGTAACTAAACTGTTATGTCAGGAAAACAT
AGACTTTTCAGTTACAATCATGAAAGTATCCTCTATAATTACGTGTAGTT
ATGTGGTCTAGATCTTTGGTAGAAGAGCTACGAGGCACCTATCATCATTA
CTTTTTCTTCAGTGAGAAAAGACTAATGTTGCAGAACAAAGTGTGATATA
CATGTACTTATATGTTAAGTATTTCTTGCCACATTCAACTTATACTCTCA
GGAAAAATAAAGAACTAATCTTTCCTTCACCACCCTTTTATTTTTGCAAC
TGTC Coding sequence (CDS) from alignment at Sc0000230:207090..214843+ >BlTCONS00113648 ID=BlTCONS00113648|Name=BlTCONS00113648|organism=Branchiostoma lanceolatum|type=CDS|length=1413bp|location=Sequence derived from alignment at Sc0000230:207090..214843+ (Branchiostoma lanceolatum) AGGAATCCTGACAGCAGAGGGTTCATGGCTAGGGCAGAGCTGCAGAGGGA GGCCCAACCTCTGTGTGACAAGTCATTTACCCTGCCAGACCCTGGCAGCC ACTATACAGCATGGTCTTCAATGGGTGGACTTGTGAAGAAGGGACTGGTC ATCAAGGACAGCAACCCTGCCAAATATTACATCACAGACAAAGGAAGTGA GCTGGCCCATAAGTTAGAGCTGATTGGTGAGCAGGGAGTGAGTGGGTCCA GCCCACAGGAAGACAGTGAGGACATGGCTTTTACCCTGACAGGACCAGGG AATGCCGCACTAACAGCTGGCCTTCATGCTGGAAGGACAGAGAGTTGTAT AGATGTGACATCTTTGCCAGCTATGGATGTTAGTCCTAACATGAGGAGAG ATGTTGGTCAGGCTGCCAGGGAGACTGTCGTGTCTGAGATGGAAACTGAT GAATCACAAGGAAGTGTCACAAGTAGATATAAAGATGACAGTAAATCAAG GCAGCCCCTGTTCACTCTCTCTCCAGGTGAGTTTGAGGTGGTGTTGTGTG TGGACACTCAGGAGACCACTGGAGGTGCTGCAGGCAGCAGGAAGGTGAAC CTGGTGCCAGAGCTGCAGAAGAACAGTGTGAGGTGTGATGTGAGGAATCT GCACGTCGGAGACTTCCTCTGGGTGGCCCGGGAGAAAGTCAAACGTCTGC CAGGCCAACTCCATCCACCCTTACCCAGAGAGCTGGTCCTGGACTATGTG GTAGAGCGGAAGAGAATGGATGATCTTGCGAGCAGTATCAAGGGTAGCAG ATTCAAGGAGCAAAAGTTCCGACTGAAGATGAGTGGACTGAGGAAACCCA TCTACCTGGTGGAAGACTTTGGCTCATCAGCAGCACACTTCTGTCTTCCT GAAGCGACTCTACAACAAGCAGTAGTTAACACTCAGGTGACCGATGGTTT CTTTGTGAAGAGGACAGCAGACATGAAGGAGTCTGTCACCTACCTCACAT TGATGACTCATTATCTGCAGAGCCTCTATGCTGGGAAGACCCTTGAGGGC TACAGCCGGGAAGATCTGCAGGATCAGTCATCAGACCTGAACCTCAATGC CAGTGTGATCAAACTGCTGACTTTTCCTGAATTCAATGAGACATCAGTAA AGAACAAGGTGATCTCTGTGAAGGAGATGTTTGCCAAGCAGCTGATGCAG TTCCATGGCATGTCCAAGGAAAAGGTGGCAGCAGTGGTCAACACATACCC TACTCCTGTGGCCCTGTTGCAGTTATACTCCAGGTGTGGTTCAGCTGCCG AGAGGGAAAGGATGCTGGCACCCCTCAAGTATGGGCCCACTAAAAGGAAT CTCGGACCAGCTCTCAGCAAAGCAGTGTTCCAGCTATACTGCAGCACTTC AAACCTACAGTGA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00113648-exon-Sc0000230-1564993656:207090..207092 | BlTCONS00113648-exon-Sc0000230-1564993656:207090..207092 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:209142..209223 | BlTCONS00113648-exon-Sc0000230-1564993656:209142..209223 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:209455..209543 | BlTCONS00113648-exon-Sc0000230-1564993656:209455..209543 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:209769..209930 | BlTCONS00113648-exon-Sc0000230-1564993656:209769..209930 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:210394..210509 | BlTCONS00113648-exon-Sc0000230-1564993656:210394..210509 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:210808..210882 | BlTCONS00113648-exon-Sc0000230-1564993656:210808..210882 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:211011..211059 | BlTCONS00113648-exon-Sc0000230-1564993656:211011..211059 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:211282..211409 | BlTCONS00113648-exon-Sc0000230-1564993656:211282..211409 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:211536..211648 | BlTCONS00113648-exon-Sc0000230-1564993656:211536..211648 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:211859..211978 | BlTCONS00113648-exon-Sc0000230-1564993656:211859..211978 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:212321..212416 | BlTCONS00113648-exon-Sc0000230-1564993656:212321..212416 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:212781..212906 | BlTCONS00113648-exon-Sc0000230-1564993656:212781..212906 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:213355..213458 | BlTCONS00113648-exon-Sc0000230-1564993656:213355..213458 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:213833..213916 | BlTCONS00113648-exon-Sc0000230-1564993656:213833..213916 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:214025..214125 | BlTCONS00113648-exon-Sc0000230-1564993656:214025..214125 | Branchiostoma lanceolatum | exon |
BlTCONS00113648-exon-Sc0000230-1564993656:214222..214843 | BlTCONS00113648-exon-Sc0000230-1564993656:214222..214843 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000230 | genome | Sc0000230:207090..214843 + |
Properties
Property Name | Value |
GeneID | BlCUFF055741 |
|