TCONS_00049023 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049023
Unique NameTCONS_00049023
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1551

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049023 ID=TCONS_00049023|Name=TCONS_00049023|organism=Clytia hemisphaerica|type=transcript|length=1551bp
ATCGCTTAGTAAAACGAACTtctctccataattcgaacggCACTGGAGCG
AATTTGATTTAAAGGAAATATCCGAGTTGTAGACGATCCAGTTGTAGATG
TTTTTAATTAGAGTTAATTGATTAGGAAATTCATTCAGTTCTAATGAATT
GTTTCGAATTATAGAGCTCGATATGAGTTAGAGAGGTTCGAATTATGAGT
TTGGTACTGTAGTTCAAATTCTCTAAGATTTTCATCCAACGTTATAAGAT
TTTAATAACATAATACCAAACTTCTCATTAGAGAAAAAACTAGAAACGAA
CATCGTTAAAGGAAATATTAAGATGGAGCAAGAAAACAGCATAGGAGTCG
ATTTACTGAAGCTGATTTGCTTGCTTTCTGTTGCTGGTTTTACATATTTT
TGTTATCGAATGCAAAAAGATCCAAAATTATTGCTACAGTTCTTAAATCG
GTTGGCAAGATTATTCCTTGGATTTCAAGAGAAATACGTAACTCTACCAG
GCTACAAGAATCCATTATGTTACATGGAGAAAGGTTACCCTAGCCCGACC
AcacccactttcgttttcgtaccCGGGTTCAGTTGTAACAAAGAATTCTT
CGGTTTGGTTTCATCTCACTTACCAACAAAATCACATGTGATTTCCTTGG
ATAACCCTGGGCATGGTAAAAGTGTGTTGGATGAGGATAAGGAAATCAGT
ATCGAATTCTTTGTAGACACTTTAAAAAAGTTTGTGGACACCATAGGACT
GAAACAGATCCATCTAGTTGGCGAATCAATGGGCGGGCACATCGTCGGTT
ACTATGCGGCAAAATATCCTGCAGATCTCTCCACTGTTTGCATGTTGTGT
CCACATGGTTTGGATTTCCCTTGGTTTAACGATCTGAAGAACAAATACCT
TAAAGAAGGACGTCATTTCTTGATGCCGCATACGTTTGAAGAGATGAAGT
TCACATCGAAACAGTTAACTGTCAAGGATTTACCGTTCCCCAATATCGTG
TTGAAAGGAATGCTTCAAGATCGATTGGAAAGGGAAAAATTTTATGATGA
ACTGTTGAAGATGTTATGTTCACCACCAAACGATTTATTGCTTCAAAACA
ACCTGCAAAAAATACAAGTTCCTGCTGTCGTCATCTTTGGTAAAGAAGAT
AAGGTTCTTGGTTACGAGTCAGTTTTTCCCATCCGTGAAAAGGTCAAGTC
ATTGAAGAAGTGTGTGGTGTTGGAGAATACTGGTCATCTATTGACGCTGG
AATGCCCGAAAATTGTTGCCAAGAATCTCATTGAGTTGTCATCTTCAATC
TGAATCGATATGAAATGACGAAGAGAAAAGTAAAATCATTgataaatgaa
ttttgaaaaaaactttttttcgaggATACTAACTGCCACCCAATGTCAAA
CCGTTTTTGCGGCAAAAAGGTTTACAAAAAACGTTTATAGTAAACTTTAG
TTAACTCCCTTTGTTGtatataacattttttcaaattctagattatattt
tttacctctattttctaatcaaaaatttctaaaaaaattcaaattttcaa
g
Run BLAST on NCBI

protein sequence of TCONS_00049023-protein

>TCONS_00049023-protein ID=TCONS_00049023-protein|Name=TCONS_00049023-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MEQENSIGVDLLKLICLLSVAGFTYFCYRMQKDPKLLLQFLNRLARLFLG
FQEKYVTLPGYKNPLCYMEKGYPSPTTPTFVFVPGFSCNKEFFGLVSSHL
PTKSHVISLDNPGHGKSVLDEDKEISIEFFVDTLKKFVDTIGLKQIHLVG
ESMGGHIVGYYAAKYPADLSTVCMLCPHGLDFPWFNDLKNKYLKEGRHFL
MPHTFEEMKFTSKQLTVKDLPFPNIVLKGMLQDRLEREKFYDELLKMLCS
PPNDLLLQNNLQKIQVPAVVIFGKEDKVLGYESVFPIREKVKSLKKCVVL
ENTGHLLTLECPKIVAKNLIELSSSI
Run BLAST on NCBI

transcript from alignment at scaffold_15:383915..389199-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049023 ID=TCONS_00049023|Name=TCONS_00049023|organism=Clytia hemisphaerica|type=transcript|length=5285bp|location=Sequence derived from alignment at scaffold_15:383915..389199- (Clytia hemisphaerica)
ATCGCTTAGTAAAACGAACTTCTCTCCATAATTCGAACGGCACTGGAGCG
AATTTGATTTAAAGGAAATATCCGAGTTGTAGACGATCCAGTTGTAGATG
TTTTTAATTAGAGTTAATTGATTAGGAAATTCATTCAGTTCTAATGAATT
GTTTCGAATTATAGAGCTCGATATGAGTTAGAGAGGTTCGAATTATGAGT
TTGGTACTGTAGTTCAAATTCTCTAAGATTTTCATCCAACGTTATAAGAT
TTTAATAACATAATACCAAACTTCTCATTAGAGAAAAAACTAGAAACGAA
CATCGTTAAAGGAAATATTAAGATGGAGCAAGAAAACAGCATAGGAGTCG
ATTTACTGAAGCTGATTTGCTTGCTTTCTGTTGCTGGTTTTACATATTTT
TGTTATCGAATGCAAAAAGATCCAAAATTATTGCTACAGTTCTTAAATCG
GTAAGTTTAAAATTACGTACTTTTTATAAAAGAAGATCCAAATTTTTGAA
GCCTTTGGAAGTTCTTAACATTTTGAGTTTTAATCCTAAAAGGTTCTTAT
AATAAAATGTGAATATTTTCATTTTGTAAATATTTTTGAGCAAATTCATA
AGAAATTGGCTGTTTTAGTCCAAAAATCCTTGAAATGTTCTTAACTTGCT
CTTAATATTTTGGTCATCGAAGCCTTTTATGTTCGCTGAGTTCGATCAAA
AACGTGTTTAAGATGATACCAGAAGATTATGTTGTTAACAAGAACTGAAT
TTGCAAACAAAATTACCTGAACGTCGAGAATTCTAAAAGACTATGGTCCC
CGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGTCCTAAGGGTACCTTT
TCCAATATGTTTAAAATGCACTGTAAGGGTCGGAAAAACTAGAGATGCAC
TGTAAGGGTAGAAATTTTAGAAAATTCTTGAGAAATCTAGATATTTTGAC
CAAAAATGGTAGAATTTTGACCAATTTTTGCACGAAAGGGATCGAAAATT
TGGGGGAAAATGCACTTTAAGGGTATGATTTTCACTGATTTTTGCTGCAC
TGTAAGGGTGCAATTTTAAAAGCCAATTTTTGGCCCGCACATACCGTCAG
TCCGCAAACTAAGTGCCCCCCCCCGGGCTATGGTCAAAGAATCAAAAGGA
CCACAAAGCAACCTCGCTATGAAGGGAACGTTTGGTTTGTTTCTGACACC
TCAAACTTTAAACTCATAAATACTAAAGGATCGATAGGCTGGGATGCTTT
CACAGTTTATATTCATACTGAAAATCAAAACCAAGTAATCTTTTACCCTT
CAATCATATGGCAGAAGCTTCGTCAGCAAAATCGGAAAAGGTTCCTATAA
CAACTTTTTTCTCGGTATAAAGTGGTACCCTAATGGCGGCACTACTCAAT
AGCGGTGTGAATGCATTGAGAGCGCTAGATCTACGTTCCCTCGAATACTT
TCGATGATGTAGCGCCGTCAGACGTTGATTTTTAACAATGCAATGGCTTC
TTTGTGGATACCAATTCAAAAAAAACTTCGATCAAAATGATGGATATAGC
TTGGTCCAGTGATCTATCATAACTTTTTTCTCATAATTTAGGTTGGCAAG
ATTATTCCTTGGATTTCAAGAGAAATACGTAACTCTACCAGGCTACAAGA
ATCCATTATGTTACATGGAGAAAGGTTACCCTAGCCCGACCACACCCACT
TTCGTTTTCGTACCCGGGTTCAGTTGTAACAAAGAATTCTTCGGTTTGGT
TTCATCTCACTTACCAACAAAATCACATGTGATTTCCTTGGATAACCCTG
GGCATGGTAAAAGTGTGTTGGATGAGGATAAGGAAATCAGTATCGAATTC
TTTGTAGACACTTTAAAAAAGGTAGGGAAGAAAATCTTTATTAAATTGTA
CAAATATTTTCAAAAATTGTTGACACTCTCCATCTACAACTATTTGAAGG
CAAAATGTAAACGACCTAGAAATAACCAAAAGAAGCTCGGTTAACCTCTA
CTAAAAGACTTCTGATTCAATGTGACGACTTTATCCCCCGATTTTTTAAA
AATCTGCGATTGGTTTAGATGTTTCAGCCCGTGTTTTTTTTGCTTGAAGT
TTGCTTGTATTCTTTTTAAAGAATTTTATATCACCCGATGAAAATTGACG
TGTTTAAGTGGCCCTCGTGTTTCTGACAATGACCGTAGACTTACAGTGAC
CGCACAGGTGATTTCCTATTCGCAATAAATCACACAGAACTAGGATAACA
AGCGATTTCTACGTCAAACTAACAGGAAGTCAATGTTAGAGAGCAATCAT
TCTTACTTTCCCATGATTCATTGCGACCGTGGAATGGCCACTCTGTACCA
GAGTGTATCTCACATTTATCGCTTCGAAGTACACTCTGTGCGCATTATGT
CTGTTTGATAAAAATCACGTACCTCTGCGATGAAGTATGACTTATAAATA
GCAACACTTCTCTCCTCGTTTCCCCTCTCTCACCAACACTCGCTTTGTTA
TGAAAATACTTTTTTTCGACAAACTTCTATACTTTCTGACAACTCTGACG
GCCATTTTGTCTTATCGCCTCCGAATTATCGCCAAACTCCAACAGCACTC
CATCGTAGCGGTTGGTTTGAAAAATCTCAAATGAGAAAAGACAATGACAA
CAGACCCTCTACGGCAATGAATTTTGAAATAAGTAGATACTGGGTTTGTG
TACAGACAATGGAATGACCGACGTTATGTTGGAAATGACAAATAAACTTG
TACACTTTCTTGTATTCTGTAAATATTTAACTCTTTCCTTTAAGTTTGTG
GACACCATAGGACTGAAACAGATCCATCTAGTTGGCGAATCAATGGGCGG
GCACATCGTCGGTTACTATGCGGCAAAATATCCTGCAGATCTCTCCACTG
TTTGCATGTTGTGTCCACATGGTTTGGATTTCCCTTGGTTTAACGATCTG
AAGAACAAATACCTTAAAGAAGGACGTCATTTCTTGATGCCGCATACGTT
TGAAGAGATGAAGTTCACATCGAAACAGTTAACTGTCAAGGATTTACCGT
TCCCCAATATCGTGTTGAAAGGAATGCTTCAAGATCGATTGGAAAGGGAA
AAATTTTATGATGAACGTAAGTTAAAGGGATAATCTGATGGTTCGAGATA
TTTGGCCTGCAAAAACCTTTTTTGGCTCTGAAAGTTGTAATTCTCTGTTT
TTCCTTCTATAAAAGTCAAAAGCTTGTAAGTCAAATATCTCGACTCTCGA
CAAAATCATTTTGAGTGTTTGGTCATGACAATACTTCCCGAATAATAGAA
TAATAGGGGGTTCTGAATAAAAAAGGGGCGGACGTCCGAAATTTCTTCAA
AATATAATAAACGTGGGGGTAGTCTAATTGCCAGGGGATTAGAAATTTAC
CCCTAAAGACCCCCATAGTAGGGTTAATTACAGACTTAAAAGAGGCTTCT
TATAGCATTTCAGCTTTTGATAGCCGAAAATATTTAATCCTGATAGGGAC
GGTGGAGATGCGAGAAAATTTTCAAAAATTAATAAACAGGGGAGCAGTTT
ATTCGGGACCTTAGAGTAGAAGGAATCAACATCCAAAAACCATCTGATTA
TTCCTTTGAGATAAATTTTTTTTGGTCTCAGTGGAACCTGATGGGGTACT
GAGGGCTGCGGAATGCAAGACCAGGCCTGGTCGAAGACATAATTTGGAAC
ACGGTCCTGAAGGAATTTTCTTCACAAGAACTGTGTACTACAATTTTCTT
TGTAGCAACGCTTAGAGAAATAAGTTCTAATAGTTTGTAATTTCCTATTC
CCTAGTGTTGAAGATGTTATGTTCACCACCAAACGATTTATTGCTTCAAA
ACAACCTGCAAAAAATACAAGTTCCTGCTGTCGTCATCTTTGGTAAAGAA
GATAAGGTAATGAAGTAAGCGTAGGTTGGTTCAATTTCGTGATTTTGTGT
CCCGAAGAATAACAATGCCGTAGCTAACGGGGCTTTGAAAAAAGTTTTTT
TATACATTTCCTGATAATATATTAATGATCTTTCATTCTATTACTGCTCC
AAATTAAATTCATTTTCATGGAGGCCACCGATATTTTAAGACCTATTTCA
AGAGTTTAGAATCATCAAATCTTAGAGGGTTTCAATGAAATTTCAAGGGT
AGAAAAAAGAAATTAAGGGTGTTTCAAGAATTTCAAAGGTGGCTGGCCAC
TGTGATTTAATTTTCTTTTGAGTGCATTATCCGGTCATCTTGAACTGAAA
ATTTTAAAATCACTTCTCTCTCGTGTCATTAAACCCTAGCCACCTCAATA
TCAAAATGCTTCCTAATGCACAGAATAATTTTTCGAGGTGTGAGTTAGGT
ACCTTACCACTGTTAGTTACCTTTCCCCAATAAGATGGACAAATTTATGT
CGATTATTACTCGTCTGCATTTTAATCTCTTATAAGTTGTTACATCTTAC
TTTTTAAAGGAAGTTTATCTATACACGTTTTTTTTTATATGAACATCTAA
GATTTTGAAGCCTTAGGATGTTCTTACTTTTTTCTGCTTGAAGCCTAAAA
ATGTTCTTAATATTAATGTCACCATTTTGTGACCATTTTCGTCCATTTTC
CTAAGAAATGTGTGTTTAAGAGTCTGTAAAGCCTTATAGATGTTCTTAAC
TTGTTCTTAACATTTTGGCAATTGAAGCCTTATGTTCTTGTATAGTTTGT
TCTTATAAAAAACGTGTACCTGTTTTGTTGATTCCAGGTTCTTGGTTACG
AGTCAGTTTTTCCCATCCGTGAAAAGGTCAAGTCATTGAAGAAGTGTGTG
GTGTTGGAGAATACTGGTCATCTATTGACGCTGGAATGCCCGAAAATTGT
TGCCAAGAATCTCATTGAGTTGTCATCTTCAATCTGAATCGATATGAAAT
GACGAAGAGAAAAGTAAAATCATTGATAAATGAATTTTGAAAAAAACTTT
TTTTCGAGGATACTAACTGCCACCCAATGTCAAACCGTTTTTGCGGCAAA
AAGGTTTACAAAAAACGTTTATAGTAAACTTTAGTTAACTCCCTTTGTTG
TATATAACATTTTTTCAAATTCTAGATTATATTTTTTACCTCTATTTTCT
AATCAAAAATTTCTAAAAAAATTCAAATTTTCAAG

Coding sequence (CDS) from alignment at scaffold_15:383915..389199-

>TCONS_00049023 ID=TCONS_00049023|Name=TCONS_00049023|organism=Clytia hemisphaerica|type=CDS|length=4905bp|location=Sequence derived from alignment at scaffold_15:383915..389199- (Clytia hemisphaerica)
GTTCTTGGTTACGAGTCAGTTTTTCCCATCCGTGAAAAGGTCAAGTCATT
GAAGAAGTGTGTGGTGTTGGAGAATACTGGTCATCTATTGACGCTGGAAT
GCCCGAAAATTGTTGCCAAGAATCTCATTGAGTTGTCATCTTCAATCTGA
TGTTGAAGATGTTATGTTCACCACCAAACGATTTATTGCTTCAAAACAAC
CTGCAAAAAATACAAGTTCCTGCTGTCGTCATCTTTGGTAAAGAAGATAA
GTTTGTGGACACCATAGGACTGAAACAGATCCATCTAGTTGGCGAATCAA
TGGGCGGGCACATCGTCGGTTACTATGCGGCAAAATATCCTGCAGATCTC
TCCACTGTTTGCATGTTGTGTCCACATGGTTTGGATTTCCCTTGGTTTAA
CGATCTGAAGAACAAATACCTTAAAGAAGGACGTCATTTCTTGATGCCGC
ATACGTTTGAAGAGATGAAGTTCACATCGAAACAGTTAACTGTCAAGGAT
TTACCGTTCCCCAATATCGTGTTGAAAGGAATGCTTCAAGATCGATTGGA
AAGGGAAAAATTTTATGATGAACGTTGGCAAGATTATTCCTTGGATTTCA
AGAGAAATACGTAACTCTACCAGGCTACAAGAATCCATTATGTTACATGG
AGAAAGGTTACCCTAGCCCGACCACACCCACTTTCGTTTTCGTACCCGGG
TTCAGTTGTAACAAAGAATTCTTCGGTTTGGTTTCATCTCACTTACCAAC
AAAATCACATGTGATTTCCTTGGATAACCCTGGGCATGGTAAAAGTGTGT
TGGATGAGGATAAGGAAATCAGTATCGAATTCTTTGTAGACACTTTAAAA
AAGATGGAGCAAGAAAACAGCATAGGAGTCGATTTACTGAAGCTGATTTG
CTTGCTTTCTGTTGCTGGTTTTACATATTTTTGTTATCGAATGCAAAAAG
ATCCAAAATTATTGCTACAGTTCTTAAATCGGTTCTTGGTTACGAGTCAG
TTTTTCCCATCCGTGAAAAGGTCAAGTCATTGAAGAAGTGTGTGGTGTTG
GAGAATACTGGTCATCTATTGACGCTGGAATGCCCGAAAATTGTTGCCAA
GAATCTCATTGAGTTGTCATCTTCAATCTGATGTTGAAGATGTTATGTTC
ACCACCAAACGATTTATTGCTTCAAAACAACCTGCAAAAAATACAAGTTC
CTGCTGTCGTCATCTTTGGTAAAGAAGATAAGTTTGTGGACACCATAGGA
CTGAAACAGATCCATCTAGTTGGCGAATCAATGGGCGGGCACATCGTCGG
TTACTATGCGGCAAAATATCCTGCAGATCTCTCCACTGTTTGCATGTTGT
GTCCACATGGTTTGGATTTCCCTTGGTTTAACGATCTGAAGAACAAATAC
CTTAAAGAAGGACGTCATTTCTTGATGCCGCATACGTTTGAAGAGATGAA
GTTCACATCGAAACAGTTAACTGTCAAGGATTTACCGTTCCCCAATATCG
TGTTGAAAGGAATGCTTCAAGATCGATTGGAAAGGGAAAAATTTTATGAT
GAACGTTGGCAAGATTATTCCTTGGATTTCAAGAGAAATACGTAACTCTA
CCAGGCTACAAGAATCCATTATGTTACATGGAGAAAGGTTACCCTAGCCC
GACCACACCCACTTTCGTTTTCGTACCCGGGTTCAGTTGTAACAAAGAAT
TCTTCGGTTTGGTTTCATCTCACTTACCAACAAAATCACATGTGATTTCC
TTGGATAACCCTGGGCATGGTAAAAGTGTGTTGGATGAGGATAAGGAAAT
CAGTATCGAATTCTTTGTAGACACTTTAAAAAAGATGGAGCAAGAAAACA
GCATAGGAGTCGATTTACTGAAGCTGATTTGCTTGCTTTCTGTTGCTGGT
TTTACATATTTTTGTTATCGAATGCAAAAAGATCCAAAATTATTGCTACA
GTTCTTAAATCGGTTCTTGGTTACGAGTCAGTTTTTCCCATCCGTGAAAA
GGTCAAGTCATTGAAGAAGTGTGTGGTGTTGGAGAATACTGGTCATCTAT
TGACGCTGGAATGCCCGAAAATTGTTGCCAAGAATCTCATTGAGTTGTCA
TCTTCAATCTGATGTTGAAGATGTTATGTTCACCACCAAACGATTTATTG
CTTCAAAACAACCTGCAAAAAATACAAGTTCCTGCTGTCGTCATCTTTGG
TAAAGAAGATAAGTTTGTGGACACCATAGGACTGAAACAGATCCATCTAG
TTGGCGAATCAATGGGCGGGCACATCGTCGGTTACTATGCGGCAAAATAT
CCTGCAGATCTCTCCACTGTTTGCATGTTGTGTCCACATGGTTTGGATTT
CCCTTGGTTTAACGATCTGAAGAACAAATACCTTAAAGAAGGACGTCATT
TCTTGATGCCGCATACGTTTGAAGAGATGAAGTTCACATCGAAACAGTTA
ACTGTCAAGGATTTACCGTTCCCCAATATCGTGTTGAAAGGAATGCTTCA
AGATCGATTGGAAAGGGAAAAATTTTATGATGAACGTTGGCAAGATTATT
CCTTGGATTTCAAGAGAAATACGTAACTCTACCAGGCTACAAGAATCCAT
TATGTTACATGGAGAAAGGTTACCCTAGCCCGACCACACCCACTTTCGTT
TTCGTACCCGGGTTCAGTTGTAACAAAGAATTCTTCGGTTTGGTTTCATC
TCACTTACCAACAAAATCACATGTGATTTCCTTGGATAACCCTGGGCATG
GTAAAAGTGTGTTGGATGAGGATAAGGAAATCAGTATCGAATTCTTTGTA
GACACTTTAAAAAAGATGGAGCAAGAAAACAGCATAGGAGTCGATTTACT
GAAGCTGATTTGCTTGCTTTCTGTTGCTGGTTTTACATATTTTTGTTATC
GAATGCAAAAAGATCCAAAATTATTGCTACAGTTCTTAAATCGGTTCTTG
GTTACGAGTCAGTTTTTCCCATCCGTGAAAAGGTCAAGTCATTGAAGAAG
TGTGTGGTGTTGGAGAATACTGGTCATCTATTGACGCTGGAATGCCCGAA
AATTGTTGCCAAGAATCTCATTGAGTTGTCATCTTCAATCTGATGTTGAA
GATGTTATGTTCACCACCAAACGATTTATTGCTTCAAAACAACCTGCAAA
AAATACAAGTTCCTGCTGTCGTCATCTTTGGTAAAGAAGATAAGTTTGTG
GACACCATAGGACTGAAACAGATCCATCTAGTTGGCGAATCAATGGGCGG
GCACATCGTCGGTTACTATGCGGCAAAATATCCTGCAGATCTCTCCACTG
TTTGCATGTTGTGTCCACATGGTTTGGATTTCCCTTGGTTTAACGATCTG
AAGAACAAATACCTTAAAGAAGGACGTCATTTCTTGATGCCGCATACGTT
TGAAGAGATGAAGTTCACATCGAAACAGTTAACTGTCAAGGATTTACCGT
TCCCCAATATCGTGTTGAAAGGAATGCTTCAAGATCGATTGGAAAGGGAA
AAATTTTATGATGAACGTTGGCAAGATTATTCCTTGGATTTCAAGAGAAA
TACGTAACTCTACCAGGCTACAAGAATCCATTATGTTACATGGAGAAAGG
TTACCCTAGCCCGACCACACCCACTTTCGTTTTCGTACCCGGGTTCAGTT
GTAACAAAGAATTCTTCGGTTTGGTTTCATCTCACTTACCAACAAAATCA
CATGTGATTTCCTTGGATAACCCTGGGCATGGTAAAAGTGTGTTGGATGA
GGATAAGGAAATCAGTATCGAATTCTTTGTAGACACTTTAAAAAAGATGG
AGCAAGAAAACAGCATAGGAGTCGATTTACTGAAGCTGATTTGCTTGCTT
TCTGTTGCTGGTTTTACATATTTTTGTTATCGAATGCAAAAAGATCCAAA
ATTATTGCTACAGTTCTTAAATCGGTTCTTGGTTACGAGTCAGTTTTTCC
CATCCGTGAAAAGGTCAAGTCATTGAAGAAGTGTGTGGTGTTGGAGAATA
CTGGTCATCTATTGACGCTGGAATGCCCGAAAATTGTTGCCAAGAATCTC
ATTGAGTTGTCATCTTCAATCTGATGTTGAAGATGTTATGTTCACCACCA
AACGATTTATTGCTTCAAAACAACCTGCAAAAAATACAAGTTCCTGCTGT
CGTCATCTTTGGTAAAGAAGATAAGTTTGTGGACACCATAGGACTGAAAC
AGATCCATCTAGTTGGCGAATCAATGGGCGGGCACATCGTCGGTTACTAT
GCGGCAAAATATCCTGCAGATCTCTCCACTGTTTGCATGTTGTGTCCACA
TGGTTTGGATTTCCCTTGGTTTAACGATCTGAAGAACAAATACCTTAAAG
AAGGACGTCATTTCTTGATGCCGCATACGTTTGAAGAGATGAAGTTCACA
TCGAAACAGTTAACTGTCAAGGATTTACCGTTCCCCAATATCGTGTTGAA
AGGAATGCTTCAAGATCGATTGGAAAGGGAAAAATTTTATGATGAACGTT
GGCAAGATTATTCCTTGGATTTCAAGAGAAATACGTAACTCTACCAGGCT
ACAAGAATCCATTATGTTACATGGAGAAAGGTTACCCTAGCCCGACCACA
CCCACTTTCGTTTTCGTACCCGGGTTCAGTTGTAACAAAGAATTCTTCGG
TTTGGTTTCATCTCACTTACCAACAAAATCACATGTGATTTCCTTGGATA
ACCCTGGGCATGGTAAAAGTGTGTTGGATGAGGATAAGGAAATCAGTATC
GAATTCTTTGTAGACACTTTAAAAAAGATGGAGCAAGAAAACAGCATAGG
AGTCGATTTACTGAAGCTGATTTGCTTGCTTTCTGTTGCTGGTTTTACAT
ATTTTTGTTATCGAATGCAAAAAGATCCAAAATTATTGCTACAGTTCTTA
AATCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031139XLOC_031139Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049023-exon-scaffold_15-1575043694:388750..389199TCONS_00049023-exon-scaffold_15-1575043694:388750..389199Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1575043694:387179..387458TCONS_00049023-exon-scaffold_15-1575043694:387179..387458Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1575043694:385934..386255TCONS_00049023-exon-scaffold_15-1575043694:385934..386255Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1575043694:385144..385244TCONS_00049023-exon-scaffold_15-1575043694:385144..385244Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1575043694:383915..384312TCONS_00049023-exon-scaffold_15-1575043694:383915..384312Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1510915933:388750..389199TCONS_00049023-exon-scaffold_15-1510915933:388750..389199Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1510915933:387179..387458TCONS_00049023-exon-scaffold_15-1510915933:387179..387458Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1510915933:385934..386255TCONS_00049023-exon-scaffold_15-1510915933:385934..386255Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1510915933:385144..385244TCONS_00049023-exon-scaffold_15-1510915933:385144..385244Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1510915933:383915..384312TCONS_00049023-exon-scaffold_15-1510915933:383915..384312Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1491911889:388750..389199TCONS_00049023-exon-scaffold_15-1491911889:388750..389199Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1491911889:387179..387458TCONS_00049023-exon-scaffold_15-1491911889:387179..387458Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1491911889:385934..386255TCONS_00049023-exon-scaffold_15-1491911889:385934..386255Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1491911889:385144..385244TCONS_00049023-exon-scaffold_15-1491911889:385144..385244Clytia hemisphaericaexon
TCONS_00049023-exon-scaffold_15-1491911889:383915..384312TCONS_00049023-exon-scaffold_15-1491911889:383915..384312Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049023-proteinTCONS_00049023-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:383915..389199 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0852562	0	0.349653	0	0.0364636	0.0611833	0.0740121	0.106279	0.120839	0.147621	0.328919	0.20694	12.6868	12.8392	9.61765	12.2159	6.66234	9.07723	22.5126	17.5757	1.83264	2.14887	1.0522	0.835355	0.216032	0.218294	0.507355	0.0822597	0.307012	0.50691
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000073AB_hydrolase_1
IPR029058AB_hydrolase
Blast
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BLAST of TCONS_00049023 vs. Swiss-Prot (Human)
Match: ABHD6 (Monoacylglycerol lipase ABHD6 OS=Homo sapiens GN=ABHD6 PE=1 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.793e-35
Identity = 94/288 (32.64%), Postives = 148/288 (51.39%), Query Frame = 2 
Query:  470 GFQEKYVTLPGYKNPLCYMEKGYPSXXXXXXXXXXGFSCNKEFFGLVSSHLPTKSHVISLDNPGHGKSVLDEDKEISIEFFVDTLKKFVDTIGL--KQIHLVGESMGGHIVGYYAAKYPADLSTVCMLCPHGLDFPWFNDLKNKYLKEGRHF-------LMPHTFEEMKFTSKQLTVKDLPFPNIVLKGMLQDRLEREKFYDELLKMLCSPPNDXXXXXXXXKIQVPAVVIFGKEDKVLGYESVFPIREKVKSLKKCVV--LENTGHLLTLECPKIVAKNLIELSSSI 1300
            G Q +YV    Y+   CY  +G P       +   GFS +K+ +  V   LP   H++ +D PGH  +      ++SI+  V  + +FV+ + L  K  HLVG SMGG + G YAA YP+D+S++C++CP GL +   N    + LKE +         L+P T EEM    +  +      P  +L+G++  R+    FY +L   + S  +   L  N+ KI+VP  +I+GK+D+VL       +    KS+  C V  LEN GH + +E P+  AK +I+  +S+
Sbjct:   47 GMQVRYVHHEDYQ--FCYSFRGRPGHKPSILMLH-GFSAHKDMWLSVVKFLPKNLHLVCVDMPGHEGTTRSSLDDLSIDGQVKRIHQFVECLKLNKKPFHLVGTSMGGQVAGVYAAYYPSDVSSLCLVCPAGLQYSTDNQFVQR-LKELQGSAAVEKIPLIPSTPEEMSEMLQLCSYVRFKVPQQILQGLVDVRIPHNNFYRKLFLEIVSEKSRYSLHQNMDKIKVPTQIIWGKQDQVLDVSGADML---AKSIANCQVELLENCGHSVVMERPRKTAKLIIDFLASV 327
The following BLAST results are available for this feature:
BLAST of TCONS_00049023 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ABHD66.793e-3532.64Monoacylglycerol lipase ABHD6 OS=Homo sapiens GN=A... [more]
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