TCONS_00049008 (transcript) - C. hemisphaerica

Overview
NameTCONS_00049008
Unique NameTCONS_00049008
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1253

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00049008 ID=TCONS_00049008|Name=TCONS_00049008|organism=Clytia hemisphaerica|type=transcript|length=1253bp
aaaacttttttgtttagatttttagcgtgaaaaaaactttaaaattattG
TGAACTATGGCAGAAAAAGAAGCAGAATTAAGAAATGCAGCTAATAGCGG
TAATGTGGCGCTTGTCAATCAATTGTTAGAAGAAGGCGTGGCACAAACTG
CTGACGAGGCAGGTGACACCCCATTACTATTAGCAACATCCAATTACTTC
ACACAACCTGAGTATGTCGAAGTTGTCCGCTCATTACTCGATTACAAAGG
GGATATCAACCACAAAAATAAATTTGGGAATGCAGCAATCCACAACACAG
CATCTAATGGACATTTAGAGATCTGTGAATTACTTCTAGATAATGGTGCA
AATTATGAAACAGAGGGAGAgATGGGTATAGTACCACTGGGGATAGCAGC
AACCAAGAAACATCATGCGGTTGTCAACTGTCTTATCAAAAGGCTGGTCG
AAGAGAAGAAATTCTCCTCCAAACAAGTAGAGTGGATGGGTAATGCTGAA
AATAATATGCAACAAATGCACATATATAGAGCATTGACTGGTATATTTGC
TGATAAAGTGGCACTGGCTGGTCTTGTCAATTTTGGTGTTATTCAAAGCA
TTGTTAAAGGGATGAAAAAATACCAGAAAATCAGCATACAAACGTCTGCT
CTGCAATTATTGATAACGATTTTATCAACGAATGAGGGATTGGAAAAAGC
GAAATCAGAGACATCTTTGaaaagtgacttaaatgaaGCTTGCAAAGACT
TTGCAAGTGATGCAAGTGATGATGTTGTTTCACATCTGTTAAATGaagtt
ttgaataaattatAATGAGACTTTGACATTCAAAATGAATTCACAAAGTG
AATAAGGCCGTCGCATTTCCTCGGGAATAAGCACTTACTGAAAGTAATGA
GAGGGAATAGAAGTTACTAGATTCATGGCGTGATAGATATGATCATCACT
ACAAATTTTCCTTGGtctatcaaaatttcaaatatttctcgATTGGGCAC
tcgttttttgtaagaaaaactATATAATAACATGAGACtacgatggccaa
aatattaagaacattttaattttaagGCTTGTAACTCAAAAAGTTCGAGC
ATTTGAAggcttcaaacttttttgatgttcttacgAATAAAAGGTGTAAA
AACCAAATTTTACCCATTGTATACATATAACTTTTAACTTAACttaatta
atttctttttgtagaaaattgtttatttaaaaatattgataattttaACC
GAA
Run BLAST on NCBI

protein sequence of TCONS_00049008-protein

>TCONS_00049008-protein ID=TCONS_00049008-protein|Name=TCONS_00049008-protein|organism=Clytia hemisphaerica|type=polypeptide|length=252bp
MAEKEAELRNAANSGNVALVNQLLEEGVAQTADEAGDTPLLLATSNYFTQ
PEYVEVVRSLLDYKGDINHKNKFGNAAIHNTASNGHLEICELLLDNGANY
ETEGEMGIVPLGIAATKKHHAVVNCLIKRLVEEKKFSSKQVEWMGNAENN
MQQMHIYRALTGIFADKVALAGLVNFGVIQSIVKGMKKYQKISIQTSALQ
LLITILSTNEGLEKAKSETSLKSDLNEACKDFASDASDDVVSHLLNEVLN
KL
Run BLAST on NCBI

transcript from alignment at scaffold_15:158812..164812-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00049008 ID=TCONS_00049008|Name=TCONS_00049008|organism=Clytia hemisphaerica|type=transcript|length=6001bp|location=Sequence derived from alignment at scaffold_15:158812..164812- (Clytia hemisphaerica)
AAAACTTTTTTGTTTAGATTTTTAGCGTGAAAAAAACTTTAAAATTATTG
TGAACTATGGCAGAAAAAGAAGCAGAATTAAGAAATGCAGCTAATAGCGG
TAATGTGGCGCTTGTCAATCAATTGTTAGAAGAAGGCGTGGCACAAACTG
CTGACGAGGCAAGACTTTGTGAATTTTTATTTTATTATATGGAAACACAA
TCATCCCGTTGTCTTTAAAGCTCGTACCGATAAGCTTACGTGAAAGCGAC
GTAACGTAACGAAACATAAAAAAGTGTCAAATTATAGTCTTATAAGAGAA
ATGAGAAAATTTGTGTAATCGCATGTACACCTATATTGAATACTGTAGCC
AATAATGTGAAGCTAATCAGTTGTGGTTAGTTAATATCAATTCAAAGTCT
GCAAAGATCTTTCTAATCACAGTTGTATGACATCTTTTAGTTTGTAATAT
CCATTCCGTGTTAATTGCTTATCGCTAGTTACCATTTTCAACTTGATTAG
CTATCAAACCATAACTTTCGCATGATCTTTTGAATAGCTGATTCGAATCG
TAAATTAGATCACAGTAAAATGAAAAAAAAACACGATTTTAACAGTAGCC
GAGATTTTTATAAAAATAATTTTATATTGCTGCAATTTATGTTTGAATTG
ATAAAAATCTTTAGAAGATAGCTAGTAGACATTAAAGGGATGTACTAAAA
TAATTGAACTGATAGTAAAACCCGTCATAACATGAAAAGCGCACGCAGAG
ATCACCGCCTTTTTGTCAGAAAGTCAAATAGCTTAGCTGAAGCGCCTTCC
GCTCGAAAATTTAAACATATACATCATTCAGTGAGTAACATCAGACTATA
AATACTTATCTGCAAGCTTACAAGACATTATGTTTTCAGAACAAACATCT
GCTAGTTTAAGTTAAGAGTCTTTGAAAAGAGGTTTACCTAATCATTCATA
AATTCTAAAGCGCTTATATATCTCATCTTAAACGTTAACGTGTAAAATCA
CTCTCTAAAGCACATTGTCTTGACATCACAAGAAAACCAATTGCAATCTC
GTAAAGTCCATCTAATAGTTCGAAATTCTCACCCAGCTGTCCAAGCTTGG
GCTTTAGTCTATACTTCAGATGACATACTGGTCTTGTTATTGTCCTATAG
GGGGTCATTTTTCCGACTTTTAAAGTGTGTTACCACATTATCAAAGAATA
TTCTTTCAACAGGTTAAGTTTTCGTCTGATATATTCGTCAGCACAATATC
ATGTTCGCTAAGCAGTAAAACCAAAAACAAATATTAAGTTTTAATATTAG
CAGTTATCAAACATTTAAAGCGTTTAATTTTCCTAATGTTAAGATCAAAT
AAAGAGAAACAAATGTTTCAGTTTCGATGGTACGTTCCATCTAGGTCATA
TTTGGGAATAAAAAAAGATAGCACTCAAGGTTCAAAGCGGGGGAAAAAAA
TAGAAAAATAAAAATTTAAGATTAATCCTTGGAATTGCTAAATTTAAAAA
AATATATACCTATATTGGGTCAATACGATTTAAGGCGTGATCTTGTTTGA
GCATCACTGAAAGTGCTATAAAGTAAGAAGAATTGAACTACAAAGATCTA
CTGATTTATTAAAAGAAAAATGTAATCTCTAGAATCCATCAAGCCTACTG
AGAGTTACACTCCGGAAAAATTTCATTCACTTGGAACCTCAAATTTAGAG
TACGTAAAGTTTTTAAACTCCGGTTAAGGAGTTTCTTAAAATCAGTGTTT
TTCATTTGTAATTGTGCGTAAATCCGATCAATCACGATAGTTGGGTTCGA
TTTCCCGATCTTTCCGGTTTGATTTCCCAGTTTGGTTAACGTTTGCGCTC
GCTATCACTAGGATATACTCTTTTAAATTTTATGTTCGATATATTAGGGA
AGGCTCACCACGATAAAGATATTTGCATAATGTTCGCTATTCAAAAATGA
TAATTACCGGAGTTTGCAGCCGTCATTACGGCTGTTTTATTTGGTCTTAA
GGGCTCTGACCATAGTGAATTTTTCATAATTGCCGTGTTTAAAATGTGTT
TTCTGACTGATGTAACCAACAAAACTATGGCATGTTATACATTTTCTGTT
AGACAAATTATTCCGGAATCTGAAAATTCAAAAATTGCATTGAAAAAATT
TGATGAAGAAGAAAAAGAAGACTTTTGCGAGGAAGAGTATTTCAACTTTG
AAGAGCTTAGTTTCGGCGAAGAAAAAACATTTTGAAAAATTTTTCGCAGT
AGATGGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATCTGGATTTTGC
TTAAAAAAACAGTCATAACTTTTGACACATCTTTTTAAAAAAATTTTCCG
CAAAATTTAAAATAGTTTAATTCTTTGCGGACAGTTTAAAGAAATTTTGA
AACAAAAAAGTTAATTATCCATTAAAACTTAGCACTTTTTGTAAAAGAGG
GTGATGCAACATATTATTAACATCTTTTTAAAGTTCATAACGTCATTTTT
GCAATTAAATTCTTAATTACTCTTAAGGGATTCGATTAAAAAGCAATTTA
TAAAGGCGATTCTTTGTAAAAAGTGTTAAGGAACCTGAAATATAACTTTT
ATGCTCAAATACCAAAATCAATTTTTGGACTATGGTCAGAGCCCTTAAAA
ACGCAATGGCATTTCTTGCTACCGTGAGTAGCACAGGTCAAAATCATATA
TTGACGCTGTGCCGACGAATCGAGATTCTATTCATCGCGCAATCAACGAA
GACACAAGTAACCATGACGACCATCCAAGATCTTGGATGAGGTTCAAAGT
TGATATTTTTATTCCTGTCGTTGAAAACACAACTTACAAAAAGTCACCAA
TGCTTTGTAAAAAGAGTCAGTGATAGAGAATCATAACATAAAGTCTGACT
ATTATTTCGATTCAATTAAAGTGACATTTCCATAATTAAAAGTTTAGTAA
TTACTGTTATACATTTGGGGATCATATAAAAGATTTCTTNNNNNNNNNNN
NNNNNNNNCTTCAATTACACTTGGAGGTTTCTAGGGAATTCGTAAATAGT
AAACTGCATACTGATACAGTCTGCTAGACATTAATATGGTAATATTTGCT
CTTCATCTTTGATTTTTTGTACATTGATTAGATTGACACATGCGCGATAA
AATTTAATATATTTTTTGAAAACTTAACCTCTGATACTCAGGGTAATTTC
TTGCCTTAGCCTTCGGTGACCCTGGACAAAAAAAATCCTGTGATTAGCCA
AGTTTTCAGCAACATTACCCAAAGAAAGTTAAGTTTAGGCTCTTTTCTAA
AAATTGTTCTTCAATCTCAATTAAAAATTTTGTTATTCAATTTGTAGGCA
GGTGACACCCCATTACTATTAGCAACATCCAATTACTTCACACAACCTGA
GTATGTCGAAGTTGTCCGCTCATTACTCGATTACAAAGGGGATATCAACC
ACAAAAATAAAGTAAGATTATTTGGTTCGGTTCCCCTCGCTGGAAATATT
CTAATATAGAAAGCTCCTCTTGGGATAATAGCGTGATTGGAGAATATGGG
GATCCTCAGGCTAACAAAGAGAATATCATTGAGTTTAAAGCCCGAAGGAC
TAGAGTAGAATCTCTTGCCTTTCTTAGGCAAGAAAAAGTGAAGCCACTTA
TTTCCCGTCCAAAACGTGCCTAGAACGCACCGTTATCATGACGATTATAT
CTAGCGGTTCCTTTGTTTTTGAGGACCGCATTTTTTGAAATCTAACGATA
GATTTTACTTTCCATCTAGTGTTTGCGTACAAACCACGCGCTGGTTTTCT
GGATAGGAGATTAAATAGCTTCATTTCCCATCCAAAAGTTTCTACTTCGG
GTTTTGAACTCAATGGAAAATATCTCTAGGACAAACGAATTTTACTATAT
TTCTATAAAAAATATTGCAATATCAATATTCATTCTAATTATTCTTCATC
AGTTTGGGAATGCAGCAATCCACAACACAGCATCTAATGGACATTTAGAG
ATCTGTGAATTACTTCTAGATAATGGTGCAAATTATGAAACAGAGGGAGA
GGTAAAATGTTTTTAAGAATCACTGATGTTTTGAAATCGTGCTACCTAGT
AGACGGGATGTTGTTCCTTCTCATGTTTATGCTTCTAAGTTATTATACAA
TTGCTTTTCGAAGAGTATCAATGTCTTAATCTTCAGCGGTTCTAGAAATT
ACTGTCTTCATCGGGGTCATAGAGACTTTCATAAGTTCCAAAGGCCAATT
ATTAATATCGTGAAATGATAGTATATCATTCTGTCTTGTATTTTTTCTCT
CAGATGGGTATAGTACCACTGGGGATAGCAGCAACCAAGAAACATCATGC
GGTTGTCAACTGTCTTATCAAAAGGCTGGTCGAAGAGAAGAAATTCTCCT
CCAAACAAGTAGAGGTCTGTTTTTCTCACTATCTTCTTTGTCTCCTTCAT
ACAAAGTTTGTATTCTTATTACGGATTTCTGTTCCTGATTTCCGAGGTTT
AGAGCCATAGATTTATAAAGCCCGAAGGGCTAGATGTCGTGCTTTGGCTG
AAAAGTGTGCCGTGTTTAGATAGGATTTCCTACCTAGGTCACGCGACATT
ACAATAGAATTTCAGGGCTTGACCAATCAGAAGCTTCACGAATTTTCGAA
AACAATAGCAACAGTATTTTTTGCAATATTCAATTTTTTTGTCTGTGATG
GCTTTAAGCACGACATCTAGCCCTTCGGGCTTTATATATCCTATGGTTTA
AGCTTATCTTAAGTATACCTTCTACCCATTCTGTCTAATAGCTGAGACCA
CGTTCTTTGTTTATGTACGTGCGAGAAAACTTACAGATAGCACCAGTGAG
ATTCCATCCAGCATTGATAAATTAACGAAAATTTAAGGAGGGGTGGGTGA
ACTTTTCCATTTTTAACAACGTTGAATCCTGTATGTCTATAACGGTAATA
TTCAAATCTTGATTAGACTTAAAGGTGTATTCTTTGGAAGGTAAAGTTTC
TAACTTTGTCTCCCTTGTCTCTTTTTCTAGTGGATGGGTAATGCTGAAAA
TAATATGCAACAAATGCACATATATAGAGCATTGACTGGTATATTTGCTG
ATAAAGTGGCACTGGCTGGTCTTGTCAATTTTGGTGTTATTCAAAGCATT
GTTAAAGGGATGAAAAAATACCAGAAAATCAGCATACAAACGTCTGCTCT
GCAATTATTGATAACGATTTTATCAACGAATGAGGGATTGGAAAAAGCGA
AATCAGAGACATCTTTGAAAAGTGACTTAAATGAAGCTTGCAAAGACTTT
GCAAGTGATGCAAGTGATGATGTTGTTTCACATCTGTTAAATGAAGTTTT
GAATAAATTATAATGAGACTTTGACATTCAAAATGAATTCACAAAGTGAA
TAAGGCCGTCGCATTTCCTCGGGAATAAGCACTTACTGAAAGTAATGAGA
GGGAATAGAAGTTACTAGATTCATGGCGTGATAGATATGATCATCACTAC
AAATTTTCCTTGGTCTATCAAAATTTCAAATATTTCTCGATTGGGCACTC
GTTTTTTGTAAGAAAAACTATATAATAACATGAGACTACGATGGCCAAAA
TATTAAGAACATTTTAATTTTAAGGCTTGTAACTCAAAAAGTTCGAGCAT
TTGAAGGCTTCAAACTTTTTTGATGTTCTTACGAATAAAAGGTGTAAAAA
CCAAATTTTACCCATTGTATACATATAACTTTTAACTTAACTTAATTAAT
TTCTTTTTGTAGAAAATTGTTTATTTAAAAATATTGATAATTTTAACCGA
A

Coding sequence (CDS) from alignment at scaffold_15:158812..164812-

>TCONS_00049008 ID=TCONS_00049008|Name=TCONS_00049008|organism=Clytia hemisphaerica|type=CDS|length=3795bp|location=Sequence derived from alignment at scaffold_15:158812..164812- (Clytia hemisphaerica)
TGGATGGGTAATGCTGAAAATAATATGCAACAAATGCACATATATAGAGC
ATTGACTGGTATATTTGCTGATAAAGTGGCACTGGCTGGTCTTGTCAATT
TTGGTGTTATTCAAAGCATTGTTAAAGGGATGAAAAAATACCAGAAAATC
AGCATACAAACGTCTGCTCTGCAATTATTGATAACGATTTTATCAACGAA
TGAGGGATTGGAAAAAGCGAAATCAGAGACATCTTTGAAAAGTGACTTAA
ATGAAGCTTGCAAAGACTTTGCAAGTGATGCAAGTGATGATGTTGTTTCA
CATCTGTTAAATGAAGTTTTGAATAAATTATAAATGGGTATAGTACCACT
GGGGATAGCAGCAACCAAGAAACATCATGCGGTTGTCAACTGTCTTATCA
AAAGGCTGGTCGAAGAGAAGAAATTCTCCTCCAAACAAGTAGAGTTTGGG
AATGCAGCAATCCACAACACAGCATCTAATGGACATTTAGAGATCTGTGA
ATTACTTCTAGATAATGGTGCAAATTATGAAACAGAGGGAGAGGCAGGTG
ACACCCCATTACTATTAGCAACATCCAATTACTTCACACAACCTGAGTAT
GTCGAAGTTGTCCGCTCATTACTCGATTACAAAGGGGATATCAACCACAA
AAATAAAATGGCAGAAAAAGAAGCAGAATTAAGAAATGCAGCTAATAGCG
GTAATGTGGCGCTTGTCAATCAATTGTTAGAAGAAGGCGTGGCACAAACT
GCTGACGAGTGGATGGGTAATGCTGAAAATAATATGCAACAAATGCACAT
ATATAGAGCATTGACTGGTATATTTGCTGATAAAGTGGCACTGGCTGGTC
TTGTCAATTTTGGTGTTATTCAAAGCATTGTTAAAGGGATGAAAAAATAC
CAGAAAATCAGCATACAAACGTCTGCTCTGCAATTATTGATAACGATTTT
ATCAACGAATGAGGGATTGGAAAAAGCGAAATCAGAGACATCTTTGAAAA
GTGACTTAAATGAAGCTTGCAAAGACTTTGCAAGTGATGCAAGTGATGAT
GTTGTTTCACATCTGTTAAATGAAGTTTTGAATAAATTATAAATGGGTAT
AGTACCACTGGGGATAGCAGCAACCAAGAAACATCATGCGGTTGTCAACT
GTCTTATCAAAAGGCTGGTCGAAGAGAAGAAATTCTCCTCCAAACAAGTA
GAGTTTGGGAATGCAGCAATCCACAACACAGCATCTAATGGACATTTAGA
GATCTGTGAATTACTTCTAGATAATGGTGCAAATTATGAAACAGAGGGAG
AGGCAGGTGACACCCCATTACTATTAGCAACATCCAATTACTTCACACAA
CCTGAGTATGTCGAAGTTGTCCGCTCATTACTCGATTACAAAGGGGATAT
CAACCACAAAAATAAAATGGCAGAAAAAGAAGCAGAATTAAGAAATGCAG
CTAATAGCGGTAATGTGGCGCTTGTCAATCAATTGTTAGAAGAAGGCGTG
GCACAAACTGCTGACGAGTGGATGGGTAATGCTGAAAATAATATGCAACA
AATGCACATATATAGAGCATTGACTGGTATATTTGCTGATAAAGTGGCAC
TGGCTGGTCTTGTCAATTTTGGTGTTATTCAAAGCATTGTTAAAGGGATG
AAAAAATACCAGAAAATCAGCATACAAACGTCTGCTCTGCAATTATTGAT
AACGATTTTATCAACGAATGAGGGATTGGAAAAAGCGAAATCAGAGACAT
CTTTGAAAAGTGACTTAAATGAAGCTTGCAAAGACTTTGCAAGTGATGCA
AGTGATGATGTTGTTTCACATCTGTTAAATGAAGTTTTGAATAAATTATA
AATGGGTATAGTACCACTGGGGATAGCAGCAACCAAGAAACATCATGCGG
TTGTCAACTGTCTTATCAAAAGGCTGGTCGAAGAGAAGAAATTCTCCTCC
AAACAAGTAGAGTTTGGGAATGCAGCAATCCACAACACAGCATCTAATGG
ACATTTAGAGATCTGTGAATTACTTCTAGATAATGGTGCAAATTATGAAA
CAGAGGGAGAGGCAGGTGACACCCCATTACTATTAGCAACATCCAATTAC
TTCACACAACCTGAGTATGTCGAAGTTGTCCGCTCATTACTCGATTACAA
AGGGGATATCAACCACAAAAATAAAATGGCAGAAAAAGAAGCAGAATTAA
GAAATGCAGCTAATAGCGGTAATGTGGCGCTTGTCAATCAATTGTTAGAA
GAAGGCGTGGCACAAACTGCTGACGAGTGGATGGGTAATGCTGAAAATAA
TATGCAACAAATGCACATATATAGAGCATTGACTGGTATATTTGCTGATA
AAGTGGCACTGGCTGGTCTTGTCAATTTTGGTGTTATTCAAAGCATTGTT
AAAGGGATGAAAAAATACCAGAAAATCAGCATACAAACGTCTGCTCTGCA
ATTATTGATAACGATTTTATCAACGAATGAGGGATTGGAAAAAGCGAAAT
CAGAGACATCTTTGAAAAGTGACTTAAATGAAGCTTGCAAAGACTTTGCA
AGTGATGCAAGTGATGATGTTGTTTCACATCTGTTAAATGAAGTTTTGAA
TAAATTATAAATGGGTATAGTACCACTGGGGATAGCAGCAACCAAGAAAC
ATCATGCGGTTGTCAACTGTCTTATCAAAAGGCTGGTCGAAGAGAAGAAA
TTCTCCTCCAAACAAGTAGAGTTTGGGAATGCAGCAATCCACAACACAGC
ATCTAATGGACATTTAGAGATCTGTGAATTACTTCTAGATAATGGTGCAA
ATTATGAAACAGAGGGAGAGGCAGGTGACACCCCATTACTATTAGCAACA
TCCAATTACTTCACACAACCTGAGTATGTCGAAGTTGTCCGCTCATTACT
CGATTACAAAGGGGATATCAACCACAAAAATAAAATGGCAGAAAAAGAAG
CAGAATTAAGAAATGCAGCTAATAGCGGTAATGTGGCGCTTGTCAATCAA
TTGTTAGAAGAAGGCGTGGCACAAACTGCTGACGAGTGGATGGGTAATGC
TGAAAATAATATGCAACAAATGCACATATATAGAGCATTGACTGGTATAT
TTGCTGATAAAGTGGCACTGGCTGGTCTTGTCAATTTTGGTGTTATTCAA
AGCATTGTTAAAGGGATGAAAAAATACCAGAAAATCAGCATACAAACGTC
TGCTCTGCAATTATTGATAACGATTTTATCAACGAATGAGGGATTGGAAA
AAGCGAAATCAGAGACATCTTTGAAAAGTGACTTAAATGAAGCTTGCAAA
GACTTTGCAAGTGATGCAAGTGATGATGTTGTTTCACATCTGTTAAATGA
AGTTTTGAATAAATTATAAATGGGTATAGTACCACTGGGGATAGCAGCAA
CCAAGAAACATCATGCGGTTGTCAACTGTCTTATCAAAAGGCTGGTCGAA
GAGAAGAAATTCTCCTCCAAACAAGTAGAGTTTGGGAATGCAGCAATCCA
CAACACAGCATCTAATGGACATTTAGAGATCTGTGAATTACTTCTAGATA
ATGGTGCAAATTATGAAACAGAGGGAGAGGCAGGTGACACCCCATTACTA
TTAGCAACATCCAATTACTTCACACAACCTGAGTATGTCGAAGTTGTCCG
CTCATTACTCGATTACAAAGGGGATATCAACCACAAAAATAAAATGGCAG
AAAAAGAAGCAGAATTAAGAAATGCAGCTAATAGCGGTAATGTGGCGCTT
GTCAATCAATTGTTAGAAGAAGGCGTGGCACAAACTGCTGACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_031131XLOC_031131Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049008-exon-scaffold_15-1575043694:164655..164812TCONS_00049008-exon-scaffold_15-1575043694:164655..164812Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1575043694:161152..161265TCONS_00049008-exon-scaffold_15-1575043694:161152..161265Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1575043694:160562..160660TCONS_00049008-exon-scaffold_15-1575043694:160562..160660Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1575043694:160199..160309TCONS_00049008-exon-scaffold_15-1575043694:160199..160309Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1575043694:158812..159582TCONS_00049008-exon-scaffold_15-1575043694:158812..159582Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1510915933:164655..164812TCONS_00049008-exon-scaffold_15-1510915933:164655..164812Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1510915933:161152..161265TCONS_00049008-exon-scaffold_15-1510915933:161152..161265Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1510915933:160562..160660TCONS_00049008-exon-scaffold_15-1510915933:160562..160660Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1510915933:160199..160309TCONS_00049008-exon-scaffold_15-1510915933:160199..160309Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1510915933:158812..159582TCONS_00049008-exon-scaffold_15-1510915933:158812..159582Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1491911889:164655..164812TCONS_00049008-exon-scaffold_15-1491911889:164655..164812Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1491911889:161152..161265TCONS_00049008-exon-scaffold_15-1491911889:161152..161265Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1491911889:160562..160660TCONS_00049008-exon-scaffold_15-1491911889:160562..160660Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1491911889:160199..160309TCONS_00049008-exon-scaffold_15-1491911889:160199..160309Clytia hemisphaericaexon
TCONS_00049008-exon-scaffold_15-1491911889:158812..159582TCONS_00049008-exon-scaffold_15-1491911889:158812..159582Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00049008-proteinTCONS_00049008-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_15supercontigscaffold_15:158812..164812 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0339825	0	0.153907	0.225861	0.320791	0.21728	5.28648	7.93498	56.4137	49.3754	2.51331	11.2934	8.94988	5.37487	16.2669	15.2618	73.3428	82.0247	12.2461	21.2822	15.7053	16.1062	15.5855	20.0852	20.6143	18.5606	11.2298	8.25507	1.0561	1.345
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00049008 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top