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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048691 ID=TCONS_00048691|Name=TCONS_00048691|organism=Clytia hemisphaerica|type=transcript|length=554bp
GGAAAGAAGTCAGAGAAGGAATTGAGTTGTTTGATGTcaccagtgaagta
gactatcCACCAATCCATCATTTTAGGAGTTCATCAATTAAAAATGAGTA
CAAGtggttccaaaattacgaacACGTCAAACCTCAAACGTAAAAAGAGG
ATTGTTCAATTTTTATGGAAGTGATGCTAATTCTGGTATGACTGTTGAAG
AGATCAATGATGAACATTGCATGGAAGTTGAAGACAGAATGATTGTTGAA
GAAAGCCATGACCGTACTTTGAAATCACCTGAAAAAGTTGGTAAGTAATG
AGCAATTTCCAAAATAGAATGTAGTGGCCTGTCCTCGTTCACGCTAGTAA
AAAGAGCCTAATATTTTTGGTAATTCGAAATGTTCAGGTTCTCCAAAGGA
TCAAGATGAATTTATCCAACCTCAGTCCGAGCTCTGGGTCTGAACCAGTA
GTATataaacaatatttttaaacCTTTTGTCTGTTGCATCCTTTCATCAT
GTTACTTTATTTTGCTCTTCTTTTCTTAATGAAACAGTAGATGTTGAAGA
TGGG Run BLAST on NCBI transcript from alignment at scaffold_145:446444..448097- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048691 ID=TCONS_00048691|Name=TCONS_00048691|organism=Clytia hemisphaerica|type=transcript|length=1654bp|location=Sequence derived from alignment at scaffold_145:446444..448097- (Clytia hemisphaerica)
GGAAAGAAGTCAGAGAAGGAATTGAGTTGTTTGATGTCACCAGTGAAGTA
GACTATCCACCAATCCATCATTTTAGGAGTTCATCAATTAAAAATGAGTA
CAAGTAAGTATTAGTTTACTTTGTGATTTCATATTAATAGGCAGTTTATA
TTTCTGTAAAAAACTGAAATAGCCTGAAAACATGGATTTTTTATTTATTT
TAGCTACCTGTCTGAAATTTGGAAACGTATCGAAGACAAAGATATTCCAG
CATTTGTTCATATATCGGAATCAGGCCAAAAACGAATTTTGTCATCCTTA
GAAACTCCTAATCCTTTTGCGAAACCCAAGGTAATATTATTTGAATAACT
ACATCATCCCCTTTAGTGCGTACGTACTATGTGGACGACCCCATATTGAT
TGCTTTAACGAGCAACAAATTTATCTTAACTTTCTGAAATTAAAATCTGC
AAACTTTCACACAGCATGACATTAAAATGACAAAAAATTGCCAAGGAAAT
TAGTACAGTACCATTTTTTTATTACTAGGTGGTTCCAAAATTACGAACAC
GTCAAACCTCAAACGTAAAAAGAGGATTGTTCAATTTTTATGGAAGTGAT
GCTAATTCTGGTAAGTATTTAAACAATTTCCAACAAGTCTGTGTACTCAT
TTTTAAACAATACTTTAAAGACTTTTAAGAGATTATCACATCATTTTTTT
ATATTTGGCTTAGAGATACCTTTATGGTCCTTGAAATTTTAGGACCATAA
AAGGAATCCTCTTAGTCAAATATAAGAAATCATCTGATAATCCCTTTAAG
CTCATTTGTTTTTTCTACCAAAATATTATAGAGGCCCCCCCAGCGGACCC
TCAATTCACGCAATCACGCAATTTTTTTTCGAAATTCACGCATTCACGCA
AATTTTCCTCCAGTTTCACGCAATAACCCGATTTTTCAGGAAATCGGGGA
AACATTGGAAAATCGGGAAAACTGCACATGATCGGTGGAAAAAAGGGAAA
ATTCACATATTCAAGAACGACATAGCCCAGATTCACGCATTCACGCAATC
AAAAAGTCAATTTTCACGTTCACGCAAGTTTTTTCAATTCACGCAATCAG
GCATTTTTTTTTCCAATTTTCACGCATTCACGCATCCGAAAATGCCCATT
CACGCATTCACGCAAACCGCTGGGGGGGGCCCCNAATCCTCTTAGTCAAA
TATAAAAAATCATCTGATAATCCCTTTAAGCTCATTTGTTTTTTCTACCA
AAATATTATACAGAAGTTTTTTCCTCTTACCTAAGGTATGACTGTTGAAG
AGATCAATGATGAACATTGCATGGAAGTTGAAGACAGAATGATTGTTGAA
GAAAGCCATGACCGTACTTTGAAATCACCTGAAAAAGTTGGTAAGTAATG
AGCAATTTCCAAAATAGAATGTAGTGGCCTGTCCTCGTTCACGCTAGTAA
AAAGAGCCTAATATTTTTGGTAATTCGAAATGTTCAGGTTCTCCAAAGGA
TCAAGATGAATTTATCCAACCTCAGTCCGAGCTCTGGGTCTGAACCAGTA
GTATATAAACAATATTTTTAAACCTTTTGTCTGTTGCATCCTTTCATCAT
GTTACTTTATTTTGCTCTTCTTTTCTTAATGAAACAGTAGATGTTGAAGA
TGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048691-exon-scaffold_145-1575043694:447995..448097 | TCONS_00048691-exon-scaffold_145-1575043694:447995..448097 | Clytia hemisphaerica | exon |
| TCONS_00048691-exon-scaffold_145-1575043694:447488..447569 | TCONS_00048691-exon-scaffold_145-1575043694:447488..447569 | Clytia hemisphaerica | exon |
| TCONS_00048691-exon-scaffold_145-1575043694:446444..446812 | TCONS_00048691-exon-scaffold_145-1575043694:446444..446812 | Clytia hemisphaerica | exon |
| TCONS_00048691-exon-scaffold_145-1510915933:447995..448097 | TCONS_00048691-exon-scaffold_145-1510915933:447995..448097 | Clytia hemisphaerica | exon |
| TCONS_00048691-exon-scaffold_145-1510915933:447488..447569 | TCONS_00048691-exon-scaffold_145-1510915933:447488..447569 | Clytia hemisphaerica | exon |
| TCONS_00048691-exon-scaffold_145-1510915933:446444..446812 | TCONS_00048691-exon-scaffold_145-1510915933:446444..446812 | Clytia hemisphaerica | exon |
| TCONS_00048691-exon-scaffold_145-1491911889:447995..448097 | TCONS_00048691-exon-scaffold_145-1491911889:447995..448097 | Clytia hemisphaerica | exon |
| TCONS_00048691-exon-scaffold_145-1491911889:447488..447569 | TCONS_00048691-exon-scaffold_145-1491911889:447488..447569 | Clytia hemisphaerica | exon |
| TCONS_00048691-exon-scaffold_145-1491911889:446444..446812 | TCONS_00048691-exon-scaffold_145-1491911889:446444..446812 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_145 | supercontig | scaffold_145:446444..448097 - |
Blast
The following BLAST results are available for this feature:
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