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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00048017 ID=TCONS_00048017|Name=TCONS_00048017|organism=Clytia hemisphaerica|type=transcript|length=1872bp
GCCGAGAAGTacttgcacgttttttataagaacataaggcttcgatggcc
gaaatattaagaacattctaaggccttgaacttttgatttaaactatttt
attacatacatacatcTGATGATCGGCTCAGGTATGAAACAGCCTgttat
gttttaatttttttaaagaaaaacaaattttgaatttagctcTCTCTACC
cttggtatagagcactttgtCACCACAAATTACTGATgttgttaaacatt
tttattaCAATTAATAGAGACATAATTGCAAATTCATTCCACGCAATTGC
AGAAACTGTTGCGAGACATTTTTGAACGAGAAAGATCATTTAACAACGTG
TGTTTCGTTAATCAAAGAAGGTGATTGTTTTTTCAAGCAAGTTGGCTGTC
ATTTCAAGGCAATAAATAAAGAAGATATGGCGAAACACGTTATAGAACAT
TCAGAGATACATCAATCAGTTTACGAAACAGACGAACAACGAAACATGGA
GATAAAACACCTTCTAAACGAAAACAAGAAACTCAAACAAACAGTTGACC
AGTTAACCCAAAGATTGAAAAATGTGGAAGAGAACTCGAACCAACAAAAC
AATGATTTATTAGATGCCATAGCTGAACTTGCAAAACGTAGTGGACAACC
TGCGCCAGATTCTGAAGGTCTTACGGCTACCATTACGGAATCTGTCAAGA
CTAACACTGAGAATATAAGTGATTTGGATTTGAAATTCCAACTACATGAG
AACTCAGTTGATGATGGTCACTTAGTTTGGAAAGTTAACAATTTTCACCA
AAGAACGACTGATGCAATCGTTGGCAAAACTAGAGCACTCCATTCTGCTC
CTTGCTTCACGAGCAAGTATGGATACAAGTTTTGCCTAAGGCTGTATCTA
CACGGTGATGGTATGGGTAAAGGAACACACTTGTCACTTTTCTTGGTTCT
TATGAAATCAGAATATGACAACATTTTGGAATGgcctttccaaaagaaaa
tcaaattcactTTGGTCAATCAAGAAGACAGAAGTAAAGATCATGTGGAG
AAAATGTTTCCAAACAAAGATTCATCAAGCTTtcaaaaaccaaagaaaga
TATGAACATTGCTTCAGGTTGTCCAATGTTTATGAATTTGAACAGATTGC
AGCCTGAAGGATTTTTAAAGGACGACTCTTTATTTGTCGAAGTTAGAATA
GATTAAACTACAGTACCAAATTTTTAAGGTGAAGATTTTGAGAGTAAATA
AGACATcgaacttattttttttcacgTATTCTATCTTTTgctataagaac
acgaggctgaaaattggcctgaaactaagaacaaattgagaacaatctga
gcctcaaatttcagaaattaccaAGACATCTTTAACATATTCTCaactca
ttttaagtttttatggAAAAAATCTAAATGTTAAGACCATCGTAAGAAGA
TAAACCTCGtgaacatttcaaaaaattaagaacagcccaacctgagccaa
aatttactggttcttataaaaaagtgtgtattttaAAAAGACTTctcatt
tttcttgattttttatcTGATAGCAAGCGTAAGGAAAGCCAGTTCATACA
AACATACcgtttttggtttgattttagaTAAAATATCCACACGGGTAcat
gttttttacaaaaacaaaatatataagaacatatagctttgatggtcaaa
atattaaggaCACCTTAATAACACCTTTAGGCTTTACGGAATTTGAAACG
GCCGACTCCttagaaaaatcaacaaaaatactcaaaaaatgatgaaaata
agaacatgtcaagaacatttttagtctcGAAACTcaagaaagttaagaac
accagaagtcttcaaaattttc Run BLAST on NCBI transcript from alignment at scaffold_14:716140..726417+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00048017 ID=TCONS_00048017|Name=TCONS_00048017|organism=Clytia hemisphaerica|type=transcript|length=10278bp|location=Sequence derived from alignment at scaffold_14:716140..726417+ (Clytia hemisphaerica)
GCCGAGAAGTacttgcacgttttttataagaacataaggcttcgatggcc
gaaatattaagaacattctaaggccttgaacttttgatttaaactatttt
attacatacatacatcTGATGATCGGCTCAGGTATGAAACAGCCTgttat
gttttaatttttttaaagaaaaacaaattttgaatttagctcTCTCTACC
cttggtatagagcactttgtCACCACAAATTACTGATgttgttaaacatt
tttattaCAATTAATAGAGACATAATTGCAAATTCATTCCACGCAATTGC
AGAAACTGTTGCGAGACATTTTTGAACGAGAAAGATCATTTAACAACGTG
TGTTTCGTTAATCAAAGAAGGTGATTGTTTTTTCAAGCAAGTTGGCTGTC
ATTTCAAGGtaagatattttcttttttcttttttgggaaaTGTTTCGGAA
TTTCAGGAGCCTGccatatttcaaattccttcaTTTTGCAATTGTTGAAC
CTTTAGCATTTGGTCTCTTTCGATCTATTTAATTTATACAGTACAGTACA
TTCGACTCTCTCTATCTACTTCGATCTTGAAAAGACCATGAAATTTCTTC
GGATTAGGGAAAGGTTCGAATTGCAGAGAGAATTTAACGTTGGAGATAGA
TAAAGTTGACTGCAATTTAATATCTCAAAATTCCAttgattttgctgaaa
aatttaggTGTTATTTAATATTCCTTATTCAACTTAAACAAGTTTGCTTA
AAGTTTGAGcgtttgagattttttaaatttttttgatttttttttcaact
tgaaGTGATAAAGCgatgatacacgcttttttttataagaatggtgtaaa
tccatttcatcatggatattcttaacttttttgggaaaatcatgctgaaa
tattcttacagcatttttattacttgggggtaattggcaatttataattt
aaaatgctctaaaaatgacattcttagcatGAGTATCAAAATTCCATGaa
ggtgatattcttagcattttcttattttttggccattttcatcatggaca
ttcttataaagtgtattcttatttaaaaaaaaagcgtgtaacccTTTAAA
AAGGAGGTGTCCTGAAAATTGCAGAAAGGGAGGAGGCGTGTTAGCAAAGT
TCTTTGGACTTAGTTCTTTAAATTTCTAGTATTGCAGTCTTGGACTGggt
taaaatcctaaaaaaatcgTTTGCTTGCTTCGATTGCAATCTATTTTAAC
CAATCTTCAGAAGGGATACTGTGAATAGACTGAAAAGCGCCTTCATTTTA
GTTAATACTGGTGGTGGATAATGTCTTAAAAGTGGTAAAAAAATCCCGAT
GATACCTCGATTTTAAGGGGGGCTCCATCAAATCCTAATAggatacccct
gtgtcacaaaccgGCTGGGAGCCCAGCCCCGctgtaaaaatttacaaaag
tttcgtccccggtgggaaaataccttagaatttcagccccacttggaaat
taGCTTTTAGTTTGAACCCCattcattcgaaattcaatgttaaaaattgc
acttcaaaaccattgcAACTAAATCTTTGAACCTTGgaacaaaggaattt
ctatccccattgggatttcaatacgaatttttatccccactgagaaaaat
attccaccggggctgtgagacaggggtataaccTACTGTAGAGGGGGTAG
CTATAGATTGGGATAGTGAGTTAGTGGAAGTACATCGATTTGTGAAGCGT
CTTTACGTCACATAGAATAAAAGAAAATGgcaaaagaacaaaagaattcC
CCATAGCCCCAATTTCGAATCCTCATATcgaataaagcatcttctgaaaa
tttcattcttccccataaatgcgaaaaatgaaaaacgaatacgaatcttt
ttacaaaagaatATGTAATTTTGTTTATTAGGGTACTATAGTTAGATCTG
GGACGTTCCTCAAGATTATCTCAGATCATTTGAGATTATCTCATTACCAT
GACGTTACCATGTTTCTCTTAAGCCGTCAGCAACAAAATTAAGCATCATT
TCACTCCAGTAACCCACACGGATGAGCAATTCCAATACACAAATTTTcca
ttagcagattcatgtaaaaagtcacgaaaaaacgtcgagtaaaaagctct
gattggctaaaaattcCTAacacaaacatttttttctcaaaatgttcaaa
ttatgaggtaatctttgcatgtcTCAGCTAATCAGATCTTTATTCAACGT
TTGTTTGTGACTTTGTTACATGAATCTGCCAATAGGAAAATTATGTATTA
CACGCACGATGCTCCTCCCCGCGTGCGAATCAGATTGGTGGCGACGAAga
agattttcgatttttcacccttattttatttgaatgaaaaatatatttat
tagGGGGGTGCATGCTACGTTATTCAACGTTATATTTATCAAGGACTAAC
ATTCAGTGCAAATACGTATGTATTCACATTGACCTGAGTTTGACAGCGAA
CACTTAACATAGGACTGAAATGAGATTCGACTTTCGCACTGCTAGTGCAA
CCGTTCAACTGACTAAGCTATCTAGAATTCTTTTGAAGTACATTCGCGGG
GAACAGCGTCGGTTCTTTTTATACGATTGTCTTATTGTTACGGTACACAA
ATTCCTcgataaacgtttttttataagaggaaactataaggcttcgatgg
ccaagaTACTAAGAACTCTAAAACGGACCCTAAAACACCTATTTtatttg
aaactcaaaaagttaagaacgtcaaaagactttatgttcttataaaaaaa
acttgtacgTGATCATTTAGATGCCTACACATTTCAGTGTCAATGAACTT
GTGAAAAAGTTTTCTATGGGAAAAAAGTCATGGTGACAGACAAATGTCAT
TATTCgacttttattggaattactCAACGATTTTTGTATCTATGACGATG
CCATAACGATATCATTTTACATGTAGAAATTCAATAATCAACTGATTAAC
AACGATTGTCTAGCTTTTACCAGGCAGAGGTTTTTTCCCTCACTGTTCGT
TAGTTGATTGTTAAACTTTACTGGTGTCATTTTCGTGTTAAAGAAGACCT
AAATGTAAACAGACCCATAACTAATGAGAGAATAATCACGTGGTAGGCTT
AGGTTAAAAGGATAATTTTGCCTCAAACCCACGATCAGAAAGTGACAAAG
CAAGTTTGGTCATAATTGTTAAAGTCACCCTGTTAAAGATTAACCCTttt
caggcaagagaaattgaagccacttattcccCATCCAAAACTTGCATAGA
AGAATAGAACGCACCGTAATCATGACGatgtggttcctttgttttggagg
actactttttttgaaatctagcatagattttagttttaatccggcgtttt
tgtaaaaactacgcgcggacGTTCTATGGATGAGAAAGAAGTGGTTTTAT
Ttcggagtctcgcctctagcccttcgggcttgaaactcaaaggttttcat
acaaacgccTTATTGAAAGTTTTATAATCGCCAGTGATTTCGAATTATAT
GCCgcctgaaaacaaaagaaacgcTTGATTCGCAATCCGTTATTAGAGAT
TTCATTTGCTTGTCGTTCCAAAAGCGACACAAatcttaaggcttggggac
acggtaagctttttttcgcgttggtgcaatgcaacatactccatccaacc
tgaaacgctttttcgtgtctccaccccatttttctttctaccaataaaag
tgaaatctcacttttgtccctgggacaatcaGCGTGTCCTCACTTTtttc
ccatgaaacaaaaaaagaaaccatgggactttttttcttgtgttggtagG
ATAGATCATGTTGCATTGCTccaacgtgaaaaaaacttctcgtgtcccca
agccttaaggcttcactttttcttgttcgagaaaagttttaaactcaatg
aggCGTCCTCGTTATTAACtgtctttttctttctctctaTATCAACTGTT
ATAATCATCGTTTTAAATCTCATTACGTAAATTTTGATAGTTCATCTCTG
TTATCATCACTTCTTAACCTGGTTAAATTCCTGTGATTCAAAGGTTAAAA
GGTTTTAATCACTGTAATTTGTATAACTTTTGTCGTCAATTGATATAGTC
ATCATACAAGATTGTAATAGTGCAcgctttttctttataagaatatactt
tataagaatgttgttTATggtgaaattggccaaaatcatcatggaatttg
gtgactgaacctaagaatgcccatttttagagcatttacTATTGAATTGC
CAATTATTCACCAGCAATGCTAAAAGTTTCCACAAAATGCCTGGGTTGGG
ATCCAAACCTAAGAATGCCGTAACAACATTCCAGTATGATTTTTcgcaaa
aagttaagaatattcatcataaattgaaaaaacaccattcttataaaaaa
aagtgtgtaattCAGCTTCTTGTTGACAATCATTACTGGTCATTATACGT
GATTGAAAGCCACAGTGTTGGCTTATTGTTACATTATTATGTTATGAAAT
TACAAGTATTACAGTTTGATTAGAGTATATAATTTTGTTAGAGTTTTTTA
CAACTTGATTTGTGAAGGAgtttgagttttgttttgttCGCTAACAGTTG
TTGACTGTGTCTCAGAGAAAAGAAAGTAGAGAACTTTGTAGAAGTTGGTT
ATCACAGAATGATATAACATGTTCAAATCGGTGAATGTCTTTAATTAacc
atcactctgatacaagagtatggggagaTATGGTGGACATTGGATGTGGT
GTGGTGATGGTAATAGTCATATGTATGTATTTCATCATGAGTATTTTTAA
CTCATATGTtcaaatttcctaaaatttggtccattttttccaaattttgg
tttgattttcaccaaattttggtcaaaatttttggaaatcgtggcccttt
gagagagaaattttagattttcgtgattttgggaccctttcagagactaa
cttttgaatttgtacccctttgagagacttttaaGGAATGAGAAAAGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTTAGATCGCATCA
TGGAGTAGCCAATAACATTTCCACGGTGTTCAGCATTTCATGATAATCGT
TACCGTGTTAAGAGTTAATGAAATGGTCAGTAAAATATTCGTTAGTTCTG
AAGATCTTTTGGATTACATCATGGAATAGCCAATTATATTTCCACAATGC
AAGAAGTTTTATCTCAGCATTTTTTGATaattagatttaaaaaaagtttc
attCGCTGTGCTGTAACTTTCCATTACGAATACACGAGTTTCGAATAAGA
AAACCATCTGATTGGATAACTTGTTATTGCAcactctttcattttttcat
gcAAATTTCGCAGAATCCAATCAAAAGATTGATTTGAGCAACACGCGTAT
CGGAGCTTCTCCAATAGCAGGAAGTAGGAAGAATATTATAGCTTAACTTG
CAGCGTGGGAAGAGAAAAAATCCTAAATTAGGCTAATTTTTCCATACCAC
GTTGAAAGAGAGTCACTTTTTAACAAATTAGCTTTTTATCTATGCGGAAG
TTTTGGACCATAAATCACGGAAGTGAAAGTTAGAAACGGGTATTTTCACC
ACGAGCTAATAGTGgaagaaacaaataaaaactcGGAAACGTATCCATTG
TTCTTCAGTTTTAGGTTATAGCGTGTGATAAAAACGCTTTATAATTAAGC
TTGTGGGAAGAGAAAATACTACGACTAAATGCTTCATCAGCAAGCCGTGA
GACCgaattcaatataaaaattaACCACCGCATAGTCCTCTGATACTTAC
ATTGAAACTAAGCTGTCATGACAAGATGATATCTGAAATTAAGTATATTG
GTTCCTCGATAGATTACTGAAAAGTTACTTTATTACACCTGTATGATCCT
TTAGCTAGTCTTGCTGAAGGTCTAAATGAAGGGCGAATAATCTGACGACT
GCAACATCTTTTTTGTAAGGACTTTGAATTGTTACAAATGAATTGGGAGC
GACAAAATTATAACCAGAATTGTGTTGCCTTATTGGAAGCTTGGTCTTAT
ACCTTTTTTCgttagatttttttctacagCTGTGCACAGCGTCCGTACGA
TAATTATGGTCTGATACCAAACTTAATCATGGGTTTAGATTTCACGATTG
TAGCACCTGATCTCACGACTGGACATCTGTCAATTTTATTTGCTTCTTCA
TTATGGATTGTAAAAACAGACAAATACAATGTCAATTTAGTTTGTTCAAG
TGACTCTCAGCTGTGATATAATTAGTCATACCTCACGCCACATCTTTGCA
ACTCTTTCACCTTCATATTGATACAGTTATATCATTAGATTTGCACGCGT
GTTTCTTTAGAAACTAATGAAATAATGATCGAGTCTTTAGATAATCACAT
GGTTGATTTTAGAAGATAAAAGCTGTGTAGTCCATATTATCCAAAGTGCA
GTaccagtagcgtagccaagcagggtgcaaaatttgtgtaggagaacagt
ttttatgacactgtaatcatctattcataatattaaaatataattacagt
gtcataaaaatctgctttcctacacaaattttgcgccctcTGGCTACGCT
ACTGAAGTGTTTATTCCTTGTTTGTAGTATCAAAAGGTTTTGATGTTGCT
TGGGAGGGTCTACGTATCTGTTAAATCTTAAGTACTTTTATTAGCTTATT
CTTAATTAGTCATTTTAATCTGTAAGCATAAACCCTGGTTACTATGTGAT
CTCTGTTAGAGTATCTGACTGGGTTTGGGGATTGCTTTAAAGGTAGTTTT
CATCCAGATTTTGATTATTATGATTAGTATGTTGAGTTTCGAGCATATAG
CGATTGGCTGTGTAAAACTCTCCCACTTTTGCTGGTTCGATTGCAAAAGC
ATTAGGGGAAAACTATGTAACTTTTGGTCAAGATTATGTCATTTTATTAT
AACTGCTGAACATGTGATTGAACAAGGATTGAATACACGATAATGTAACT
AAAGTGAAACTCTTTGCTTTTGAAATAAACTTTGAGTGCACTGGGGTAAT
TTGAGACTGCTCTTACTTCTCAGGAAGTTATTTGAAACAGAAAGTAACAC
AATTTCgttgtttttactttttatggGTATTAAACTGATGCTGATGTACG
TTTTAGCAGTCATGCTACAAATTTAGTAAAATGTATTCATATCAATTGAT
TAGGGCATCACATCAACAATGatgcaattttcgaaaaaaaaagccACAAC
CTCTTTTCATTATGACGTCAACAAGCTACTTGATAAAAGGAAATTATTAC
AGTACCAAGTTCAATAGTGTAATGCCAAACGGGTATAGCTTGGTTATGTT
AtgttataaaaattaaaaaagaatttcatttttttgttatgTTCAAGTTG
TACTTTGGGACCACTGAGATTTATATGGACTACTGAAAGGTAGTTTCTCA
ATCCACTCACctgacacacaacgttctttcaacgtcaatttaacgttcac
aacgtccattcaACGCcagatgaatgttgaaacaacgttgtgtgtcagat
GTGCAggcaaagcaaaatcttttgattagagtttttttaaaagtggtacc
ctaatagTATCACTACTCGATAGGGCTGTAGAAGCATCGAGAGCGCTACT
TACTTTTTGTTAGCTGTttatgatgtagcgccgtttgaaTAACGTAAAGA
CAAGATTTCTTTATAACCGTTGACCTCGTTAGAAccattaaaaaggaaaa
ataaccaAGTTTCTCAGTCACTTTACATATcactttgtttttgttgattt
tctctGTTGATCATTCTATTTTCCTTTTTACTAGCCAGGAAAATGGTGAT
TGTAAAGCTCTTACAAAAACCTTTTCAACATTGAGATAAGTGTCTATAGT
AGTAAACAATATCTTTAGGCCTAATTGTGAATCATTACGGCTCGGTGTTA
TTTTAATCTAGAGTTTTAAGAACAGCTATATTAGATTATCGGAAGAGCTT
TTAATGGGCTTGAATTGGAACTCAACGTGATAGTCATCATATATCATTTA
TCAGTTatggtttttttcttttgctttttcatACTTTTTCTTCGCAATTT
TCTTCCGCCAATCTATTATTTTCCTCACGTAAAGGTTGTGATATTTTCCT
GTTAGACAGGACATGATAAGCTATTTAAAGGATGTGCACAAGAAAAAACT
ATTTCATTTCTAGGGGATTTTCTAGCGAACACTCGCAGAAGAAgtacttc
attttcatttttattcaatcaaagtgaatttttgttgtAAACGTTCAAGC
TCATCATTTATTTACATTGTTTTCAGCGATAACGTATTCAAAGCAACTGT
ATTTTTCTTTcccgaattttcttcgaatttttcTTATGAGGTAGTTTGAT
TTTGTACGAGGTGAAATTGTCCTAACTATATAGGGGATATCTTCGCGTAC
AAAAATGCTGCAAATGTGCAATTCTATATTCAGGTTTTTCTGTTTTGCAC
CAGTGTGTTCGCTGTGTTTTACCCAAAAAACAGTTGAGACATTGTTTTAA
TTGTAAATGGAAAAGTGAAAGTGCAAACTTAAAgattcttaaaaattttc
atttttttcaacagGCAATAAATAAAGAAGATATGGCGAAACACGTTATA
GAACATTCAGAGATACATCAATCAGTTTACGAAACAGACGAACAACGAAA
CATGGAGATAAAACACCTTCTAAACGAAAACAAGAAACTCAAACAAACAG
TTGACCAGTTAACCCAAAGATTGAAAAATGTGGAAGAGAACTCGAACCAA
CAAAACAATGATTTATTAGATGCCATAGCTGAACTTGCAAAACGTAGTGG
ACAACCTGCGCCAGATTCTGAAGGTCTTACGGCTACCATTACGGAATCTG
TCAAGACTAACACTGAGAATATAAGTGATTTGGATTTGAAATTCCAACTA
CATGAGAACTCAGTTGATGATGGTCACTTAGTTTGGAAAGTTAACAATTT
TCACCAAAGAACGACTGATGCAATCGTTGGCAAAACTAGAGCACTCCATT
CTGCTCCTTGCTTCACGAGCAAGTATGGATACAAGTTTTGCCTAAGGCTG
TATCTACACGGTGATGGTATGGGTAAAGGAACACACTTGTCACTTTTCTT
GGTTCTTATGAAATCAGAATATGACAACATTTTGGAATGgcctttccaaa
agaaaatcaaattcactTTGGTCAATCAAGAAGACAGAAGTAAAGATCAT
GTGGAGAAAATGTTTCCAAACAAAGATTCATCAAGCTTtcaaaaaccaaa
gaaagaTATGAACATTGCTTCAGGTTGTCCAATGTTTATGAATTTGAACA
GATTGCAGCCTGAAGGATTTTTAAAGGACGACTCTTTATTTGTCGAAGTT
AGAATAGATTAAACTACAGTACCAAATTTTTAAGGTGAAGATTTTGAGAG
TAAATAAGACATcgaacttattttttttcacgTATTCTATCTTTTgctat
aagaacacgaggctgaaaattggcctgaaactaagaacaaattgagaaca
atctgagcctcaaatttcagaaattaccaAGACATCTTTAACATATTCTC
aactcattttaagtttttatggAAAAAATCTAAATGTTAAGACCATCGTA
AGAAGATAAACCTCGtgaacatttcaaaaaattaagaacagcccaacctg
agccaaaatttactggttcttataaaaaagtgtgtattttaAAAAGACTT
ctcatttttcttgattttttatcTGATAGCAAGCGTAAGGAAAGCCAGTT
CATACAAACATACcgtttttggtttgattttagaTAAAATATCCACACGG
GTAcatgttttttacaaaaacaaaatatataagaacatatagctttgatg
gtcaaaatattaaggaCACCTTAATAACACCTTTAGGCTTTACGGAATTT
GAAACGGCCGACTCCttagaaaaatcaacaaaaatactcaaaaaatgatg
aaaataagaacatgtcaagaacatttttagtctcGAAACTcaagaaagtt
aagaacaccagaagtcttcaaaattttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00048017-exon-scaffold_14-1491911889:716140..716547 | TCONS_00048017-exon-scaffold_14-1491911889:716140..716547 | Clytia hemisphaerica | exon |
| TCONS_00048017-exon-scaffold_14-1510915933:716140..716547 | TCONS_00048017-exon-scaffold_14-1510915933:716140..716547 | Clytia hemisphaerica | exon |
| TCONS_00048017-exon-scaffold_14-1575043694:716140..716547 | TCONS_00048017-exon-scaffold_14-1575043694:716140..716547 | Clytia hemisphaerica | exon |
| TCONS_00048017-exon-scaffold_14-1491911889:724954..726417 | TCONS_00048017-exon-scaffold_14-1491911889:724954..726417 | Clytia hemisphaerica | exon |
| TCONS_00048017-exon-scaffold_14-1510915933:724954..726417 | TCONS_00048017-exon-scaffold_14-1510915933:724954..726417 | Clytia hemisphaerica | exon |
| TCONS_00048017-exon-scaffold_14-1575043694:724954..726417 | TCONS_00048017-exon-scaffold_14-1575043694:724954..726417 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_14 | supercontig | scaffold_14:716140..726417 + |
Blast
BLAST of TCONS_00048017 vs. Swiss-Prot (Human)
Match: TRAF3 (TNF receptor-associated factor 3 OS=Homo sapiens GN=TRAF3 PE=1 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 2.446e-51 Identity = 120/375 (32.00%), Postives = 209/375 (55.73%), Query Frame = 1
Query: 274 NCKFIPRNCRNCC--ETFLNEK--DHLTTCVSLIKEGDCFFKQVGCHFKAINKEDMA-------KHV---------------------IEHSEIHQSVYETDEQRNMEI---KHLLNENKK----LKQTVDQLTQRLK-----------NVEENSNQQNN--DLLDAIAELA---KRSGQPAPDSEGLTATIT---ESVKTNTENISDLDLKFQLHENSVDDGHLVWKVNNFHQRTTDAIVGKTRALHSAPCFTSKYGYKFCLRLYLHGDGMGKGTHLSLFLVLMKSEYDNILEWPFQKKIKFTLVNQEDRSKDHVEKMF-PNKDSSSFQKPKKDMNIASGCPMFMNLNRLQPEGFLKDDSLFVEVRID*TTVPN 1221
+C + +C + C +T L + HL+ CV+ C FK+ GC F+ N++ A +HV +E ++ QS++ +EI K +L N+ L++ +D ++LK N EE + +++ L + + EL K +GQ A ++ L + ++ + + + ++D+DL+FQ+ E + +G L+WK+ ++ +R +A++GKT +L+S P +T +GYK C R+YL+GDGMGKGTHLSLF V+M+ EYD +L WPF++K+ L++Q S+ H+ F P+ +SSSF+KP +MNIASGCP+F+ L+ ++KDD++F++V +D + +P+
Sbjct: 196 DCPCVVVSCPHKCSVQTLLRSELSAHLSECVN--APSTCSFKRYGCVFQGTNQQIKAHEASSAVQHVNLLKEWSNSLEKKVSLLQNESVEKNKSIQSLHNQICSFEIEIERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRVTELESVDKSAGQVARNTGLLESQLSRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWKIRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGEYDALLPWPFKQKVTLMLMDQ-GSSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQTVLENGTYIKDDTIFIKVIVDTSDLPD 567
The following BLAST results are available for this feature:
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