TCONS_00047895 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047895
Unique NameTCONS_00047895
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1187

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047895 ID=TCONS_00047895|Name=TCONS_00047895|organism=Clytia hemisphaerica|type=transcript|length=1187bp
ATGTTGGTACTAATTGCTTCTTGATAATCAACCGCACAGACGGACTTGAA
CTCAAAGGGTTGACCAAATAAAAAAGTCCCGAACTGCATGTACGGACGAC
ATGGTCTTATAATAGATTGCCAATCCATGACTGACCACCTATCATGACAC
AGATTCTTTTGAAACGCGTCTGTCATCTCAAGAGACTGGGACCAAGTCAC
GTGGAAGATGGCTACCCACGTGAAAACATAGTCCTGCCAAAGTCTACTGA
GTTGTATGGGTGATGGGTAGTTAACTTTGCTGGTCAATCAACAACGATGG
TGAATTCAACACTGATGACATCGAAATTTCTGGAAGAGCGATGGAGAAAC
AAAACATTGAACTTATATCACGATTTTGTCAATAAAAATGATATGCGTCA
TTTATTGATAGTAGAAGGAGTTGCACTTGCAGGATTACTTATAATGCTGT
TTGGTTATAGATTTATCAGGtttGCAATGTTCGTATGTGGATTTTGGTTA
TCTTTTTCAGTCTTCTACACTTTCAGCCCTGTTTTGATTAGGCAACATTA
TAGTTGCGATAAAAGCAAATTTCACGCAGTACATCTCGTTTCCAGTGTAA
TGGTTGGCACATTGATCGGTATTTTCACTGCCAGTTTGTATCGCTTTGGT
ATCATGTTGATCGGAAAATGTTTAGGTTTTCTTCTCGCCATGGTTTTACT
TCATACAGATATTTTCCAAAACATCTCCAGTTATTACATCATTTCAATCT
TCGTTACATTGGTTGCATTGGTAACAACAGCATTAACATGGAGATTTGAA
AAAGTGTTGATGATTCTCGCCACCTCATTGGTCGGATCTTTTACATTGTT
CTGTGGTATTGATATTTTCCTTCAGAACAATTTTTCCCTTCTGGTCATCT
CTGTTCTTATTTACTTGCGTGATGCATTCCTCGTCATTCTCAAACATCAA
TTCAACCATCACCATGGTAACAAGAAAATGGTTGAACTACCAAACTTCCA
TGATTCTCTAAAGCCAGCACATTTAGACTCAATGTTTACTTCGATCTGGA
TTTTCGTGACCATTTGTGCATGCGCATTTCAATACTTCATGTCagcaaaa
gaaatgaaaaatggtGGAGAAATTTGTCCCTTATTTAGTTTTAGTTgttg
taaaaagaaaaagataatcgatgaaaaataaaaaata
Run BLAST on NCBI

transcript from alignment at scaffold_139:548290..565382+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047895 ID=TCONS_00047895|Name=TCONS_00047895|organism=Clytia hemisphaerica|type=transcript|length=17093bp|location=Sequence derived from alignment at scaffold_139:548290..565382+ (Clytia hemisphaerica)
ATGTTGGTACTAATTGCTTCTTGATAATCAACCGCACAGACGGACTTGAA
CTCAAAGGGTTGACCAAATAAAAAAGGTAAAgtttatgatttcttttctc
ttccaCTCGGACttaaaatcaatttcaaatataaaattATTTAGACAAGC
AATTATGCGAAGCTCAACACTTAGTGTTTTGAGCAATCTGGTGACAACAg
cagtctatgctcgcttacccGAACCGCACTGGTGAGTCTTGGGAAGgacg
aaacacgtgtctgcAGATAGATGTAACACGTTTAGatagaaattttagcg
aatagAATTTTGGTGATGTTTGCTTGTGTTGCATGACATCAAAAAAGTAC
TTATTTCCGAAACTTGTGTGTTAATTCCGACCGTTTCAATTAAGCAGGGG
CGTGATAAAGGCGCCCAGTATTTATAAACGATCGTATTGTGCGACCCAAG
AGAAAATATGAATACATTTGGGCAAAAATTAACCCTTACGCTGtactttt
tgttcattttaaaGCCCCGTCGCTTTGGCCAAGGGGCTTCCCCCCAATGT
AGATTTTTATATGTCAAGAActttatttcttgaaatttgaaCTCTGGAAT
TGGATCAATTGACATTTTTGTTTCCAATCAAAGCATTCTATAAGGAAAAG
AACTATCAAAACATTTCTGACTGCACAACTCAAATTGTATCTACTTTTTT
GAGAtgtgatgaaatatttttaatgaaatatgGACTTTAAAGAAAGTTTG
CAAATTTTATAGTCCTCTATATTGACTGTTTCACACGTTATCAAATTCTT
ATAGGctgtttttaattttagtttttttNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNaaaaaaaaaaactttttggattGTTGGCACTCATTGCTTC
TTGATGATTAACCGCACATCGACGGACTGGAACTCAAAGGGTTGACCAAA
AAAAAAGGTAAAGTTTATAATTACTTTCCACTCGGACTTAAATcaatttc
aaatataaaattatttttcatgtaTAACTATTAGACAAGCGATTATGCAA
AGCTCAACActtagtgttttgagcactctggtgacaacagcAGTCTATGC
TCGAGCTTACCCGAGCGAGCCGCACTgatgagtcctgggaaggacgaaac
acgtgtctgcggatagatGAATCTATTAGATAGAAATTTTAGTGAATAGA
ATTTTGGTGATGTTTGTTTGTGTTGCATGACatcaaaaaagtatttattt
ccgAAACGTGTGTGTTAATTTTGACCATTTCATTTAAGCAGGGGCGTGAT
AAAGGCACCCAGCATTTAAAAACGATCGTATTGTGCGACCCAAGAGAAAA
TTTGAATACATTTGGGCAAAAATTAACCCTTACGCTGTATTCTCGTAcaa
ctttttgttcattttaaaGCCCCGTCGCTTTGGCCCAGGGGCTTCCCCAC
TGTGGTAGATTTTTATATGTCAAGAActttatttcttgaaatttgaaCTC
TGGAATTGGATCAATTGACATTTTTGTTTACAATCAAAGCATTCTATAAG
GAAAAGAACTATCAAAACATTTCTGACTGCACAACTCAAATTGTATCTAC
TTTTTTGAGAtgtgatgaaatatttttaatgaaatatgGACTTTAAAGAA
AGTTTGCAAATATCATAGTCCTCTATATTGACTGTTTCACACGTTATCAA
ATTCTTATAGGctgtttttaattttagtttttttaaagtcttttatgaGA
AAACTTATGTGAACTGATAAGCACTTTATATAATATTTCAGTGAGGTTTC
CTTTTCTTCGAGCAGATTTAAAGAGAGATAAGTAAAGAGAAGGATGTCTC
AGgtctcagaaaaaaattttagacAAATTTTTATTCTTGTAGTTGGATTT
TTTCAGGGGAATTTCTGGTCTGTGATTAGGGTgatatgaaatataaaaaa
gtaGGGCGATATAAAGACAGTAGAGTTTGTAAGGAAAatgtttgtgattt
ttttatagcagagaaaaaaagattttttttttaagataaaatagAAGCAG
ACTCCAGGCTAGAGTAGGACAGATCTTTGCCATAGTATATGTTAGATCAA
AGATTTCTAAACCCTCTGTATTCAGTTgaatgaagaaatttcattcgATA
CATCTCTGTCTCAATGCAGGAGACCTCTGTGACCCGTTCTTCGACCGTTC
AGCCAATCTAGATAGCAGTTTTATAAAACAATAGTTTTCAAGTCATTATG
AAATTTTAGGGTATCTATTGTACACATATATTTCATAAGAACACCTTCAT
TtgggctgagcctggatgtacttatttggacaatattttgaGCCTAAGCT
TCATATGAATTCAGATAATTTTAAGTAAGCAAATTTTACTAATATCTTAT
TTCTCAGGCTACATATGTTCTTACGTTGTTCTTATTTCTTTCCTAAATGT
TagcttgaatgttcttataaactgggttctaataaataAACGCGTATATT
TTGTCATTTGGAACAATATATTGgccaattttccagtggaaaggTCCTAT
TCAtgaccattgcaatgtcttccacggacccaacagctgattggttgaaa
gtgacgtattatTGACTGATTtatgtcacttacaaccaatcaactGTTGG
GCCCGTTATGTAATGTCAggagacattgcagtggtgcatatcatgaattg
ggaTGTCTCATCACAATCGATGTGACCAAAGTATACTAGTCCTCCTTTGT
TATTGCTGATCAACGAACGACCACCATGTagttaaaaagttcaaaaagta
TTCCGTGACTtaaatcaaaaccaacaattaaaaaaatcaatcaagATTTC
ACTTAGATTTACCAAGACAACGCAATCAAGGAGAATAATTTGTTTACGTT
TTCAAATTAAAGCAAAACCAAAAATGGTCAGTCATCATGACTTTTTCTAA
CATATTTTAAAATCATACTTAGAGACATTGTATTTTGGTAAAAGTAGACA
TAGAAaggctgattttgattttatgagAATCTTGGAGAATTGATGTCGAG
GGAAAGCTTAATAATAGGTTTTCAATTTTCCAGATAGGGGCTCCTAAAGT
TATTATGACTGAGAGAAAGTGGACCGTCAGAATCTAAAAttagagagaaa
aaattattcTGGAAAATCTAATCATTTCCTGAATTTTGGGGGGTCAGACT
GATTATCCTTCGTGGGTTCTTTAAGcttacatttttgtttttgaggaatC
TTTGAAGTACTGTTCTAATTCAATTGAAGCTGGTCTAATATTGATGTTCA
AATTAAATCTTTgtgtttgttttcaaaatattttgattacaaaaatctTA
ATGAGAAAATACACACTCGACTGTCTtaaagtaaaagttttttgtcgtga
gaaaaccaaacaacaaattcagatttttatttaaaagatattttaattTC
GATTTGAGTGTTAGACCTTAGAATTCAAGAAATGTAGATAAAAGTCAAGT
GACTTCTGGGATTCATGATAATCTAAAATTGTATACTATAAGAGTATTAT
GTAGTAGCATAGTAGAATTTGATTTCGACTACTAGACATTGTTTTTACTC
TTCATTCTTTCGAATACTAATTTAACTATCATATCAAGGCCCTCTAAACG
TTATAGCACAGGTATGTGAAAGATAACATACTTTATCCAAGTTTCAAGTT
ACAGTTTAGTTGATTACTTGTAAGATTTATAGGGTTATATATTTTGAAAC
AGAGACTTATTAAACATTAAAGCAAGTCTAGCCATGAGTGCTATTAACTT
CTTTAACTTTctagctttgataaaaaaatacattGTCAAGAAAAATGAAT
TGATAGAATGATGGGTTTATGCTGCTGTCGATACATCTTGGTCCCATTCA
CATGTTTTTTGTGTCTGGTTGTCTACGCTGTTTCTATAGTTACACCGAAC
TGGAGGATTTATCAAAATGGTAACCTCACTGTGATCGAGGGATTATGGAA
ATCATGTAATTCTTCGACAAATTATACTTTTTATGAATGTTATATCGCTC
AGGACTCAATAGGAAGTACAGCATGGATGAAATTTTGTCGGATGGGAGCA
GTCTTAGGTACAGTTTGTTGTATCTTAGCAACCGTTTTCAGTATTCTTTT
CTCACGGAAGCCGAGTCGATATACAAATCTGTTATTAGTATTGCTACATT
TGATCGGATCCGGTTCTTTGGCACTGACTTTAATGTTATATGGAATCGAA
TTTAACCGATCTTCCAATGAATTAACTGCGCATAATTTCAAACTCGCATG
GAGCTACATGATTGGCTGTGCGGGTGTGTTAGCATCCATTTTGACACTTA
TTTTAACGGTTGTTATTTATCGGAGATCGATCAAGAAGTCTGGGAAGGAG
AAGAAACAGAAGAATGATCACGAAAGTTTAATGGTACAAATGACTGATGA
AAGAAACGATTTTTATTGAGAATGTTTCTTAGCTTTGGTtgagacggccc
acttttcgccctacATATTCTCATTGTGAATCTAGAAAGTCGGCTGTCAA
TGCATTGCCTTATTTTGGCGGCAATAAAATGACTTCAACAAAGATTTGAA
TTGTCAACTTTGTGCCAAAtttttgcctactctaacaGTTAAATTAGGAA
GGGCAGAAAGGCTGTCTAAAGCAGAGCTTAGAGCTTACACATATCAACGA
ACCCTTATaccaaaagttgtataaaaaagaaatcaagctCGAGTTTACCA
GGgttgaatgaaaaacatttgagTCCGTTAGTAATGATTGGTTCATGGCG
ATCTATATCTAAGGCATAGCAAACgtgaattgacgtcaaaatccaAGGGG
CCTTTTTCGACTTAGAACGCCATGGATTGGTtacattttgaagtcaatca
aactCGGACCCAATCCTTTTGTTAGGGGTGATAGGTCTATTTCCCTGAGG
TTTCAATGTTGAGATAATTCTGAATCCGTTCGCTTATCTTCTAATAAGTT
ATACTAAGAAGCTGACGAGTATTTCTGAAGATCTGGAAGAACTTGAGTAT
ATCTTTAGGATTGAAGTAATAAAGATTATTGTCCTTTGGTTAGCAAACTA
ACATAATATTATTGTCCTTTGGTTAGCAAACTAACATAATGtagaccaga
cccgatcaatcgaattTGTCGAACCAATATGTAGAAGAAGGGGGGACCTT
ATCAACAGAAatgaatattattttttaatgatttttatagaaatattaaa
tttgtacataaagaaaagtttttaagcAGAACGATTTTTACTAAAGACAT
CccgaacaaataagatttatTTTGCTCCAATTTTAGTGATATCTGTAAGC
ATGGCCGAACTCAATGCTTTTTTCTTATTAACAGTTCTTTTCATACAAGC
TTTGGCTGGGTTCCGTCTATAATATTGTGTCAATATTTTCTCCACATTTT
TCAGCAATGATTTTCGATCGCCGTTCGGGGCTGATTCCGACATTTGGAAG
ACGTCTAATACGGGAATTCCGTTGTTACACATTGCTGATGTTGCATACGC
GTTGAATAATTTGACTCGCTGAAAAAAAGGAATAATGGAAGAATCAATTT
AGGTTTTCAAGGATCCTGGCGGTCTCGTAAGGGGCGTGGTCTCTCGGCAA
ATTTTCAATTATACCCTTCGAATGGTGCTCTTAAAATTATAACCATAGAA
TGGTAATGTTCTCTCTTTCCCGTCAAGGAGCTTGCTCTCATTCATAATGA
TGAACTTTATCAAATATCCTCCATTTTACGTCTTAGACTACGTTTGCACC
TGACGGTTCAGTTCCGCTCCGAagcgaaatgaagccattctattggttat
aTTCAAGTTTTACTACGCCACTTCTGACCAATAGAATGGCTCCATTTCGT
TTccgagcgaaacggaaccgttacgtgcgaacatggtttGGGAAAGGAGA
TTACTTTTAATGATTGGTCAGTTCAGTTAAAAAATAGAATCCTAGGATAG
AGTCGAGGAAGAAGAGAGCCTTTTGGTGTGTTTTCTCAAGTCACCATGTT
TCTCACCTGGTGATTGTTGAAGTGATTGTTCGGGTCTTCTGAATCTCTCC
ATTTGGTTGAAATGGTTCTCCAAACAGCTTTCCCTTTATATTTCTCCTTC
AAAATCTTTGCAGCACGATCAATAAACGTTCGGTATTTCTTGAAACCCAA
ATTCCGTACAAATGGGTGCCCGTATGTTAATAAAAGACCGCTTTCTTTGC
CCATTTCAGGCTTGGAGATCATTTCTTTGAGTCTCTTAAGATGCATTGCT
GTAGAGAAAGTCTTTTGTGGcgtgatgtttttcttttctgatGTATCGTC
TTTGTATCTAATTATTGGAAATAGCATTAGTATATTTCGTTTTGAAAATA
CTTTATTAAAGCGTAAGCTAATTTCTCCACACGATAACAGTGATTGATTT
GAGCTCGCAAAACTTACTACTACTACATTCAGTACTGCTAGACAAAGGTC
AATAATATGTTGCAGGTGCTTATGTACTATGTcactttgaattttaaaat
attacaaaaatatCAGGCAGAATTTGTTAAGAGGTTTTAAAACCCTTCTT
ACGGTATACAttctttgaaaacatttttacacAAGTCTTTGGTTTTCAAT
CGTTCGCTTAGATCTTGTGTCATCTCATCACCCACCATTTTGAACACTCC
TTCTTTGTGTTTAAAACATGATTCAATACCATCTTCATTGTTGTACTCAA
GAATCTCGTCTACGAGAGAGAGGAAAATAGGTTGTTGACGACAACTATGT
CATAGTCCTATAGAGACACATATATCTCAATTGTTGTGCGGAGAGGGTCA
CTGGGTGGAAATTTTAGTAGAAAAAGACTAGTGTGGTGTTGTTTATATGT
AAGAGTTTGAACCTTCAAGGTTGACACTTTCGCGGTTCTTGGAGAATTTG
cccttttttcgtcaaatattttttcgcgaaagtttttatTCGTGACCTTT
CTTCTAAACCTAATCTTCATAAGTTTTATGCTCACACACGAAAGTTTATT
CAATGTACTTGGATTAACATTCAAGTAAAACAgtcaaattaaattaaatt
tcaaatcgGGTTTGGGTAGgtagtgaaaatatttttttgccgtTTTGCAA
AAGAATAATTTGTCTCACCATCGATATACGGTGTCCATGTTTTGTTTACC
CAACGACCAAATCCTTTCCATAGCAACGGGTCACATTTATATTGTCTACC
ACATGATTCTTTCCATCGTTTCAAGTTTTGCCGTAAATCTAAAAATGGAA
TATATAACATTCTAATTTTCATACTGGAAATTTGattattaatttctttt
taagacGTTCTTTTTGTTTCCCATGTCAGACTTCTGAGTAGTTTAAGCGA
CTAGTTTCAAGAAACATTTCGTCTTTCCACTCcagattgcaaaaaaaaag
gagaCAAACTAGCCTAACTGCACCTGTTTACCAACTTTAACGCTTTCAAG
AGGAATAATCAACTCAATCGTGTAAGGAGGCATAAAAAGCAAAATGTAAT
TTGTCATGGCACTATAGAGCCAAAAGATCTGGAGATCTTGTCATCCATTT
AATGTTTCaggttctttttttttaaatgtaccTTGTGTGACGTTTTTTGG
AGATTGTTCGATCTTGAAGGATATGTTTCCACCTCTCAGTGGTTCCCATA
GCAACTTGGAATTCTTTTCATCACCAATAATGATGGCAGAATCTGAAGAG
GAGAGATATAGTAGTTTATTAACGCAGGTTCATCAGAAAATATCAGTTTC
GGTTATTTTGCAAGCCATAGAGGGATCGGGAGTTCGGTTGAATCAAAATA
CGgttaactctctctaattcgatcttcaaagacccggaattttcatcaaa
tcagtgaaagattcgaattacagagagtatttaACACTATTTTCTGGCTG
ATGGGATTAATATTtaagttcgagttatagaagtatttgaataatagagg
taCGAATAGATCATCATCTGCGTGATCTTTTATGGGACCGAACACTGTAT
TGTCAATCAAACTACAAacctctttttaaccaatcctGTGGCGGATCTTT
AAATGCTTCACAAAGAGTTGACTCTAGAACAATTTCAGCTTTATAGTGAC
CGGGTTGCATTGCTATAAACTTTGTCTCATATACACCATTATTAAGATCT
GTGATGGAGGGTGTGATACGATCAGCACCGCGTACAAAAACACGCCATGT
ATCTCCTCCTTCTTGCTTGTTGTGACCATCTGCTGTTCGTGTTTGGATTG
TGATTTTATTGAATACTCCAGTCTTCTCAAGGTCGAGacctaaaaaattt
tcaaactaaaaaattgTACTCGATCATAATGTTATTTGAGCTTTGAGTTA
ACATGCGAGTTGGATTAAAGGCTTATTTTACCAGAACCTGACATAtactc
aaatttcaaaattcattaccgCAGTAAAAGTGTTAAACGTTTAGATACTT
CTGGCAAAAAGCAGACATAAGGTCAACTTAACAGTTGTAGTATTTGATCA
AATGCGAGCCAAAAacttaccttaagtggataaattttggcggggattaa
atttggcgagtttggcgaatttggcgaattatGCCAaatttcgccaaatt
aaatcctcgccaaaatttccaaattcggcaattcgccaaattaaatcccc
gccaaatttaacaaaaagagaaaNGTTTgaaacacccctgtttcaaagCT
CCATAGTTGAACTTCTTCTCATAGTGggatggaaattctattgtttcaag
ctCAAAAATCAAGTGGGAtcgttttgaagtgcaattttttccaattcttt
ccaaagtcgatttcccagtggggaACTACAGTGGAAATTTTCCACTAGGG
ACGAAAATTTGGCTAAACTTTTCAGTGAAGCGAGTGTCCCACTGGGTCTT
TGGCACAGGTGTGCTGAAGGGGAGCTTGCGAGATATGTGGATAGTGTTAG
TGCGTTatctctgaaaatttaagaatatattTGACGGAAAGGCATAATGT
ACAAATGTTTTTCTACCCCTTCCTTTTTAATCGTTTATCTTTATTCAAAA
CTCCCTATTCGCAAAATGTACATATCCCCGAGAAAACCGCAATTNtatcc
acttaaggtacttAAAATCAAACTTGGCTTATTACTAAAAGTAAGTTCCA
ACACGAATAGCCCAACGAACTCATTCTATTAACGTCTTATTAACTGAGGA
ATAAATTGACACTTTCTGAGAGATTACTCACCTAACGTATGACTCCATTT
CGGACTTGTTCTGTATTTCTCAATACTTCTTTTTTCAGTCCCGAACTGCA
TGTACGGACGACATGGTCTTATAATAGATTGCCAATCCATGACTGACCAC
CTATCATGACACAGATTCTTTTGAAACGCGTCTGTCATCTCAAGAGACTG
GGACCAAGTCACGTGGAAGATGGCTACCCACGTGGTGAGTAATAATGATN
ggtggggggggggggggtacttaggcagaAATAAGAAATAAGAGGTGCTG
GGAATGGGTATGGCTAGTTTTTGGAGAACCGGTTCGTTCCGCACATACCC
GACATTCTCCAACCCTAGTGCCCCCGGGCTCTACCCGCTCTCCCTTAACA
AAAGAGAAGGGTTAAACACTATGGAGAATCTTAACGATATGTGTATTAGA
TTTTAGAGGTCTTTCCCTGACAAGAGGCTATCGAAAGCTGCCTTCAATAT
CGAAATTCGTATAAATCGGTTTTGGTAAAATCAAAGACTTGAAAACCGCT
TTAAAGAATAGAAATGAAGCATTTCAAACTCATATTCTGCATTTTTGATA
CAGTAAGCCCCCGGTAAATTcttgtaaaaattaaaattctagtttttata
aGACTCCTTCTTACGGCAACGATGACATTGTGCAACAGTGCTTTTAGCTG
AAGATTTTATGTCTTTTCTTTAGAAAACATAGTCCTGCCAAAGTCTACTG
AGTTGTATGGGTGATGGGTAGTTAACTTTGCTGGTCAATCAACAACGATG
GTGAATTCAACACTGATGACATCGAAATTTCTGGAAGAGCGATGGAGAAA
CAAAACATTGAACTTATATCACGATTTTGTCAATAAAAAGTATAAACTtc
gttcttaatattttgttcttataaatttttcgtgactttttttatGATGA
AATATGACGGTCTAATCACTAGTCAGAGATCCGTATTTTGGTTTGGCGat
ttgataattttgtgattgaGTTTAGTGTTTTTCACAACGTTGTAAAGACG
GCTAAAAAACCATGCTGGGATTACTAATCTGTGAAATAAAATACTCTGGA
GAACTATTATCTATGCCTATGCTCTTAAAAATGTTGAATTGATGTTTGAT
TTTCTCGTTTTTTTATAGTGATATGCGTCATTTATTGATAGTAGAAGGAG
TTGCACTTGCAGGATTACTTATAATGCTGTTTGGTTATAGATTTATCAGG
GTGAGTGTAATCAATGCtaacaacacccctgtctcagtgtcTCGGTGAGA
ATTTCTTATCCTGATGGATGAGCCGAACGCTGATGTAGATGAAGAATCCC
TTGTATTAATTCTTTTGTCTGGGATTCAAAAAACAGTTTTGAATCCCTAA
AATTCCAATCCTACCTTTAGGAGGCTGTTTGGGTTTCAGTTTTGTTTTCC
ACCGGGATGAAGTTNTAAAATTCCAATCCTACCTTTAGGAGGCTGTTTGG
GTTTCAGTTTTGTTTTCCACCAGGATGAAGTTTTAGGATATTTTCTTTCT
ATGTACGGATTTCTTGCCGATTTCTCCAGTGGGTAGGAGGTCTCGGCGGG
TCTGTAACACtgagatttttcttttaatgcCCATAATTTTGAATGCTACT
TAGAGACGGATTGAATTGGCCCACCTATGTTGATAGATTACAAGGATAtt
agcaaaaaaagtttttccgtgtttttcagccagaaacagctattttgccc
agtttttgcgctttttgaagctcaatatctcgagttaggtactgaaatca
cctatacttgcaatatatctctaatcctaattttttgagagctttccaaa
aaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNacaggtctccgttttctcgagctaa
aattttcattaatttttaaccctatgatttttgcctgagaccgtcatatt
tgtccgaaaatcacaccaaggtgtccgaaaaaaaattggaaacatagtaa
tttcgattcccctaccccttacctttccaaaaatgtataacaagtgcttc
taacaaaacagtcgagcgattttacaaaatgccctctactattatTTTTA
ACAAAGCTTCCGCATAatgataatttcttttgttcttttttagtttGCAA
TGTTCGTATGTGGATTTTGGTTATCTTTTTCAGTCTTCTACACTTTCAGC
CCTGTTTTGATTAGGCAACATTATAGTTGCGATAAAAGCAAATTTCACGC
AGGTTAGTAAGGTTTCAAACCGGTTTTTAAGTTTGTATTTTATAGACGTA
TGACTTTCTCAATAAAACATTTTAGATTGTCCCCGTGCTGCCATCGGGAG
TTTTGTAACAAGAAAACTGTATGAGCTTTACCTTGGTTTAAATCAGGTTC
ATTAAAACAGTTAAATCATTGTTGTTTTGAATCCAATACCCAAGATTTTG
AAGCGACATCTTAATTCTAATTAAATTCATTACAGGCTATCCTTTAGACA
GTGAATAACGCAATGGGTGGCTGATTTCCAGTCCTTCATCAAACTGCCAT
AAGCCCGTAAACTCAGTtttaaattcagttttttttagcCAAAATGCCCT
TATTGTCCTAGAAAGCATAAAAATGTGGCAAATCTTTTTCTAGTACATCT
CGTTTCCAGTGTAATGGTTGGCACATTGATCGGTATTTTCACTGCCAGTT
TGTATCGCTTTGGTATCATGTTGATCGGAAAATGTTTAGGTTTTGTAAGT
TTTATTCCTTTCTCTCTCGTCTAAATTAAGTTTATTTGTCATGATCGTTG
CtattcactaaaataaaaacccatgtTGCACTTTATTTACTGGATTCTCA
GTGAAAAAGAATCAAAGCAACCTTCTCATCAAGAAGACATGTGTAACTAA
AGCTTTAATGTAATTACAATACCTCAAGGTACCACTAAAGAttttcgtat
aaataaaagagTCGATAGTTTTACAGAGTGGAATCCCCTAGCTTCTCACa
aaatgtgactccccaagcgattttaagtacctGGAAATCGGGCCGGTCTT
TAGAAGGATTTTCAAGGACCGGTCAAACGAGCGGCGGCCAGCACCGTTCG
AAATCAGGAAAAAggtataaaacaaaaaaaagaccgTTATAATACCAAAC
CAATACCGGTCCGATTTTCAGTTACTCAAAATCATAAATATTAATTTTAA
TCTCTCTTCTTTAGCTTCTCGCCATGGTTTTACTTCATACAGATATTTTC
CAAAACATCTCCAGGTAAGAACCTCCTATTCGTAGACGTGTGACGAGGCA
AATGAAATTCACTTCCCAGACTTCAATGTCAGAGACTGTGATATTAAAAA
GAACACAAATGTATCTACCATCATGAGTAAAGTTGGAAATCTAATGTAAA
GGACatcatttgcttacacagcatttttaacaAATTCATTTGTCAGGATA
AAAGGCAACGCTTcctttctatatcataaaaaaaaatatattttaaaaat
taaattattaattTTTATTCCAGTTATTACATCATTTCAATCTTCGTTAC
ATTGGTTGCATTGGTAACAACAGCATTAACATGGAGATTTGAAAAAGTGT
TGATGATTCTCGCCACCTCATTGGTCGGATCTTTTACATTGTTCTGTGGT
AAGTGATAGATAGATGTCCATGCTCTGTCATAAGGCTTTAAAAGCGTATC
ACCTTTTTCCGTAAAACTGAAAGTATGTAATATTTACAGTTGATTCACCA
TACTGTAAATTTTAGTTAGCTGCGAAATAGCCTAGGCCACAGGcctaaaa
aattgttaaaagtTCTTTACGTCGCCCAACCAAAGTGGGTGGAAAATTTC
TGGGCCCATACaaacaaaaaacagaaaatccttttttaATTAGTTTAATG
CCAAAAAAAGTTTACTGTACATGTCTTTCTTTGTTCTTTACAGGTATTGA
TATTTTCCTTCAGAACAATTTTTCCCTTCTGGTCATCTCTGTTCTTATTT
ACTTGCGTGATGCATTCCTCGTCATTCTCAAACATCAATTCAACCATCAC
CATGGTAACAAGAAAATGGTTGAACTACCAAACTTCCATGATTCTCTAAA
GCCAGCACATTTAGGTAAGTTACGAAAGCCCCCTTAAGTGGATTCATTAC
CCGGGGTAGGGTTATATACTATCGGGAAATCGGAACTCATTTCATCCCGA
TGTGAGCCCTATCGGCTACACATAATTTGCAACTATTTTTCCCCATTGAA
ATAACAATAGTTTTCATTATCatctaaagtttttgaaattcgCTTTATTA
ATGATCAATTTAAAGCAACATAAACCAGTTATTTGCCACAAGAAAAGTTT
GANTACAGTTGATTCACCATACTGTAAATTTTAGTTAGCTGCGAAATAGC
CTAGGCCACAGGcctaaaaaattgttaaaagtTCTTTACGTCGCCTAACC
AAAGTGGGTGGAAAATTTCTCGCCTGGGCCCATACAAACCAAAaacagaa
aatccttttttaATTAGTTTAATGCCAAAAAAAGTTTACTGTACATGTCT
TTCTTTGTTCTTTACAGGTATTGATATTTTCCTTCAGAACAATTTTTCCC
TTCTGGTCATCTCTGTTCTTATTTACTTGCGTGATGCATTCCTCGTCATT
CTCAAACATCAATTCAACCATCACCATGGTAACAAGAAAATGGTTGAACT
ACCAAACTTCCATGATTCTCTAAAGCCAGCACATTTAGGTAAGTTACGAA
AGCCCCCTTAAGTGGATTCATTACCCGGGGTAGGGTTATATACTATCGGG
AAATCGGAACTCATTTCATCCCGATGTGAGCCCTATCGGCTACACATAAT
TTGCAACTATTTTTCCCCATTGAAATAACAATAGTTTTCATTATCatcta
aagtttttaaaattcgCTTTATTAATGATCAATTTGAAGCAACATAAACC
AGTTATATGCCACAAGAAAAGTTTGTTGGGATTCTATTGATACGAGGAGG
AAACACCTAAATCGTAGGGAACTTAGAAGGATATGATTAAGGGTTGATGC
TTAAAAGTTTCCCTAAATATAGACGCAATTCTTATAACTGATTCTTTACA
GGCTAATTTTTAGTAGCACATTATGTCAAAGATTGATTCAGACCTCgctt
aaaatgttttctttgatgattTCTTTTTCTAGACTCAATGTTTACTTCGA
TCTGGATTTTCGTGACCATTTGTGCATGCGCATTTCAATACTTCATGTCa
gcaaaagaaatgaaaaatggtGGAGAAATTTGTCCCTTATTTAGTTTTAG
TTgttgtaaaaagaaaaagataatcgatgaaaaataaaaaata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030478XLOC_030478Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047895-exon-scaffold_139-1491911889:548290..548365TCONS_00047895-exon-scaffold_139-1491911889:548290..548365Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:548290..548365TCONS_00047895-exon-scaffold_139-1510915933:548290..548365Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:548290..548365TCONS_00047895-exon-scaffold_139-1575043694:548290..548365Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1491911889:560028..560173TCONS_00047895-exon-scaffold_139-1491911889:560028..560173Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:560028..560173TCONS_00047895-exon-scaffold_139-1510915933:560028..560173Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:560028..560173TCONS_00047895-exon-scaffold_139-1575043694:560028..560173Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1491911889:560663..560828TCONS_00047895-exon-scaffold_139-1491911889:560663..560828Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:560663..560828TCONS_00047895-exon-scaffold_139-1510915933:560663..560828Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:560663..560828TCONS_00047895-exon-scaffold_139-1575043694:560663..560828Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1491911889:561108..561189TCONS_00047895-exon-scaffold_139-1491911889:561108..561189Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:561108..561189TCONS_00047895-exon-scaffold_139-1510915933:561108..561189Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:561108..561189TCONS_00047895-exon-scaffold_139-1575043694:561108..561189Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1491911889:562183..562291TCONS_00047895-exon-scaffold_139-1491911889:562183..562291Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:562183..562291TCONS_00047895-exon-scaffold_139-1510915933:562183..562291Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:562183..562291TCONS_00047895-exon-scaffold_139-1575043694:562183..562291Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1491911889:562683..562783TCONS_00047895-exon-scaffold_139-1491911889:562683..562783Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:562683..562783TCONS_00047895-exon-scaffold_139-1510915933:562683..562783Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:562683..562783TCONS_00047895-exon-scaffold_139-1575043694:562683..562783Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1491911889:563254..563303TCONS_00047895-exon-scaffold_139-1491911889:563254..563303Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:563254..563303TCONS_00047895-exon-scaffold_139-1510915933:563254..563303Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:563254..563303TCONS_00047895-exon-scaffold_139-1575043694:563254..563303Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1491911889:563563..563687TCONS_00047895-exon-scaffold_139-1491911889:563563..563687Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:563563..563687TCONS_00047895-exon-scaffold_139-1510915933:563563..563687Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:563563..563687TCONS_00047895-exon-scaffold_139-1575043694:563563..563687Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1491911889:563983..564153TCONS_00047895-exon-scaffold_139-1491911889:563983..564153Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:563983..564153TCONS_00047895-exon-scaffold_139-1510915933:563983..564153Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:563983..564153TCONS_00047895-exon-scaffold_139-1575043694:563983..564153Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1491911889:565222..565382TCONS_00047895-exon-scaffold_139-1491911889:565222..565382Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1510915933:565222..565382TCONS_00047895-exon-scaffold_139-1510915933:565222..565382Clytia hemisphaericaexon
TCONS_00047895-exon-scaffold_139-1575043694:565222..565382TCONS_00047895-exon-scaffold_139-1575043694:565222..565382Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:548290..565382 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34462	0.687302	0.205367	0.236012	1.36976	1.02442	2.33557	2.95495	1.48642	1.218	1.94373	1.37981	2.40422	1.70221	1.42549	3.00154	2.64241	2.7493	0.812608	0.756299	2.87857	2.99511	1.37774	1.40323	2.03747	2.44687	0.689403	0.690109	0.322107	0.287154
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047895 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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