TCONS_00047945 (transcript) - C. hemisphaerica

Overview
NameTCONS_00047945
Unique NameTCONS_00047945
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3787

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00047945 ID=TCONS_00047945|Name=TCONS_00047945|organism=Clytia hemisphaerica|type=transcript|length=3787bp
TGATACTGGAAAGAAAGGGTATTTTTACACAAAATGGACCAAATTCATCT
TGTGAGGGGTGAGAACAAACTTATTCTGAGAAATTGAAGGTCTCTCTCAC
TgttgaataaaatttttgaagtttctatatttacaattttgtCGTTTAAA
AATGTTCCTAAAATGAAATACTATCTATTTTACACGAAAATAATCTACta
caacaaaaatatttcaatgtcAAATTAAAAAGACAAAGACAATTAGTTCC
TTCAGGCATCTCAAATAATTGGAAAAGGAAGATTTCATGAAATAAGGCAT
CAAAAGTCGCAAAAGTTCCAATTCGGTAACTAAAGGAAACAGGAATAAAG
TCATGTCAATTCTAATTAGTCCCAGAATACAAACACATTTTCAGATCAGT
TAGTCCAACCTATTTACACTTTGAGTCTTAgaaattgtttgttttgagAA
ATCAAATTTTGGGATCGAGAGAGACGAACAGGATTTGTGTATTttactaa
ggatgaaaattatACCATCTGAGGTGAAAAGGTTAGCTCAATCTCTTGTT
ACATCTTATACAAAACGGTTAGACCACAAAGTTTAAGATTTTAACGAGGT
GAAAGAAACTTGTGGGCTCACGTTTATAAGCTTTCACCAAAGTACAAACA
TTTACCAAAGGAAACCTTTACGTGTgtcatttcaaaaacaaagtagCGCT
ATTTAAAAAGTCTGATTCAAAGCTTCAAAGCTGACACTTAGGAAGTAAAT
AAGAGTCACAGATAGGACAAAACAAATCTCAGAACCATTTTGATTGCGAA
AACAGATGAGAAGGCTTATTAAAATGAGAAGCTTTCATTGCAAAATGAAT
AGCAGCATCAATAAGTAGCTAGGACAGTTAGCTTTTTATCCTCGCGTATC
AGCTTTAAGATCTTAATTCATATCATCCTTTTACTTCAAAATTGAATTAA
ATCAATTTATTacgaaaaactaaaaaaaatctaTCCACATCTAGTAAATT
TAGTTTAAATAGATCGATTTATTGATAAATATTTCCAGACTAGGGACTAA
GATCTAAGACTGATTGTGAATGAGtgtttttacacacaaaaacttgACCT
AGGGGCAGGTACTGTACTGTTTCTCGATGTGGGTGTAGGTACTTTGCACG
TCAAACAATTTTGACCAGCATCGACGTGACATTCAAAACAATAATGCGCA
CGGCATGAATTCTCGTTACATTCGACAGTTTTACGGTACGATAAAGAATC
ACAAATCATGCAAGTCCTGACAGTAAATTTATCACAAACCCATTGTAATC
TGGTCGGTAAAACGTtgtaaattttcgaaaaaaatgaaatgcgAAGTCGT
AACCTCTTCTCTTCAGATAGCAATTGAATTTTACGACGAACGTGTCTCGC
AAATGCGTGTCTATCGTGAAGAATTTTATAATATAAATGTTTGGAACGTG
TTTCAACCATTTCAGGATAAATGTAATCGCAAACAACACTTCGTAACCGT
AAAACATGACTTTGCATTAAAATGATGAAAAGCGTTGTACCAAGAAGAGC
GTAAATGACAACTCTATAGCGATAATGATTATTCTGCTCGTAATGAGCAA
GACATTTCTTCGTTAACACGGCTGTTAGAAGGATATCGACATGATTCTCG
ATCAGAACGAGACAGACAGTGATAAAAACCATTACTAATAAATACACCAG
CCATTTGTAAATACGATTTCGTTCAGCTTTAGTTGTGTTCACATTTCCTC
GAACTAGATATGTGTAAAGTTCGATACGGGTTAAAGGTAAAATTAAGTCA
GTGAGACCACGGTTACGGCGTTCGGTATCAAGCTCACGCAAGCGTTGTGT
GATGTAaatattgtctttgtttttcgTGGTCAGATACACTTTGTTATAAT
TGTAAGCTTCAGCGAGAACCATTAATGCCAAGAAAGGCAGCAGGTAAAAT
ACAATGTTTTTTAATGTGTAAGTGACTTCCAACTTCTCATTGTAAGTGTT
TGTCATTATAGTGGTCGAAGCACAAATAGATTCAGCTTGCTTTTTAGTTT
GACAGAAGAAATCTTTGGTTTGATTGCATAGAAATTGTTCGTAGCCGTCT
TTAGGAGTAGACCAAGTGCGACATGAGCGattgaaatcattgaataatCC
TGAGCAAGTATCAGCAATTCTACCGAACTTATACATACAGTCGTCCTGTA
ATGTACCAGAAACCACAGTGGAATTATAGAAAAAATCCTCATTGTTCGCA
CATGAGCGAGCTATGTGAATTTTATCAGCTGTACCGAAAACTGGACCCAG
GATTAAGAATACGATCAACAACATGAAAGCGACGATCTTACAACGATAAC
CAAACAAGCTTGGAAATAAAAGCATGATAACACAAAATATACCACGATGG
TATAACGTGACTGGTACCACGAGAAGCACGATGAAAATAACAGTAGCCAC
ACTGAAACATAACACGGGATGTAGTTTCGTTAATAGCAGTAACACTAAAA
ACAACGTGACGGATATTCCAAGAGCTGCGATAAAACTCAAAGCGACTCGA
ACTGTCGGGTTTTTGGAGTAGGGTAGGAAATAATTGTCTCTGATATCAGC
CGGAGGATCATAATAGTTTTGATGTGCTTCATCAGGTGCAGTTTGTACTT
TGGCTTCAGGTTCGCCATGTTTTCCTTTCCAAAGCATCATGAGAGATTTC
TTCTTTTTACGTTGTTTTATTTTCTGCGGTGGCGCTACATCGTTTTCTAG
CTCATGCGAAGGATTAATCTTTGGTACTTCATAACCTGCTTCATCTTCGT
AAGGGATTGTGTTGGTTCTGTTGTTATCATTCAAAAGAGGTGCCTTACTA
TCGTTGTTTTCACCACTGTAATGACTAGCAGAATTGTATCCTTCGTCGTT
GGCTTTTGAGGTTTCAGATACTGAAGGATGTCGAGGTGGTTTAGGGAGTG
GACTTCGTTTGGGAAGGGGGATTTTTTCATCATTGTTGGTCTCCTCATCC
TCTTCATCAATACAGTTCAATGTTTCTTCGGAAGACATATCCACGTAATT
CCCTTCACCTAATCGCGCTAATCGAGAAGTCGTTGACGATGGGTTTTGAT
CTTTCTTCAAAAGTTGTCTATCCTCTGCATCATCTAGTGTCGTGTCTGCG
TCATCGGTCGTCAGAGCAACACCTTCTTCGTGTAATTTCTCCACCAATTC
AGGTTCAATTTCGCGATATTCGTTTTGTTGTACAGAAACAACGTTGGCTG
TTGGTATTAAACCGTAAGTTCCAGATCGAATATTTTTGCCACGGAACCAA
TTATCATCAACACGTTCACAGTCTATAATAATATCTCCTTTTGAAGCGAC
TAGATATTCATTCTTTCCAGTGTCTACTACTTCGTAGTTACCAATGACTT
GATACACGTTATTGTCATCCGTCGTCATCCTTCCCTCTCaatcaacaaaa
catttgaACCAACAACAAACCAAACAAAAGAACAATCCAATTTCTCTCTT
TTATTATCAGTTTTGAAAGTCTATAAAATTATTTGAgatgatgttttgat
tttaatttggtGTTCGGTCGTTGATTTCGTTTTATGAGCTCATTGACATT
TCATATTCAGTTCTCAATGTCATGTAaaaaaccaaacaattttttgtgaa
tttttctctctttttgctaaaaagataaaaataagaaaaaaattgataaa
gaatGAATGCGAACCGTATTGAGTAGACAGCGCCGACACTTTTCTTGAGA
AAGACACGAAAATATAAACAGCAAGATAGAGAGAAGA
Run BLAST on NCBI

protein sequence of TCONS_00047945-protein

>TCONS_00047945-protein ID=TCONS_00047945-protein|Name=TCONS_00047945-protein|organism=Clytia hemisphaerica|type=polypeptide|length=782bp
MTTDDNNVYQVIGNYEVVDTGKNEYLVASKGDIIIDCERVDDNWFRGKNI
RSGTYGLIPTANVVSVQQNEYREIEPELVEKLHEEGVALTTDDADTTLDD
AEDRQLLKKDQNPSSTTSRLARLGEGNYVDMSSEETLNCIDEEDEETNND
EKIPLPKRSPLPKPPRHPSVSETSKANDEGYNSASHYSGENNDSKAPLLN
DNNRTNTIPYEDEAGYEVPKINPSHELENDVAPPQKIKQRKKKKSLMMLW
KGKHGEPEAKVQTAPDEAHQNYYDPPADIRDNYFLPYSKNPTVRVALSFI
AALGISVTLFLVLLLLTKLHPVLCFSVATVIFIVLLVVPVTLYHRGIFCV
IMLLFPSLFGYRCKIVAFMLLIVFLILGPVFGTADKIHIARSCANNEDFF
YNSTVVSGTLQDDCMYKFGRIADTCSGLFNDFNRSCRTWSTPKDGYEQFL
CNQTKDFFCQTKKQAESICASTTIMTNTYNEKLEVTYTLKNIVFYLLPFL
ALMVLAEAYNYNKVYLTTKNKDNIYITQRLRELDTERRNRGLTDLILPLT
RIELYTYLVRGNVNTTKAERNRIYKWLVYLLVMVFITVCLVLIENHVDIL
LTAVLTKKCLAHYEQNNHYRYRVVIYALLGTTLFIILMQSHVLRLRSVVC
DYIYPEMVETRSKHLYYKILHDRHAFARHVRRKIQLLSEEKRLRLRISFF
SKIYNVLPTRLQWVCDKFTVRTCMICDSLSYRKTVECNENSCRAHYCFEC
HVDAGQNCLTCKVPTPTSRNSTVPAPRSSFCV
Run BLAST on NCBI

transcript from alignment at scaffold_139:53152..56938

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00047945 ID=TCONS_00047945|Name=TCONS_00047945|organism=Clytia hemisphaerica|type=transcript|length=3787bp|location=Sequence derived from alignment at scaffold_139:53152..56938 (Clytia hemisphaerica)
TCTTCTCTCTATCTTGCTGTTTATATTTTCGTGTCTTTCTCAAGAAAAGT GTCGGCGCTGTCTACTCAATACGGTTCGCATTCattctttatcaattttt ttcttatttttatctttttagcaaaaagagagaaaaattcacaaaaaatt gtttggtttttTACATGACATTGAGAACTGAATATGAAATGTCAATGAGC TCATAAAACGAAATCAACGACCGAACaccaaattaaaatcaaaacatcat cTCAAATAATTTTATAGACTTTCAAAACTGATAATAAAAGAGAGAAATTG GATTGTTCTTTTGTTTGGTTTGTTGTTGGTtcaaatgttttgttgattGA GAGGGAAGGATGACGACGGATGACAATAACGTGTATCAAGTCATTGGTAA CTACGAAGTAGTAGACACTGGAAAGAATGAATATCTAGTCGCTTCAAAAG GAGATATTATTATAGACTGTGAACGTGTTGATGATAATTGGTTCCGTGGC AAAAATATTCGATCTGGAACTTACGGTTTAATACCAACAGCCAACGTTGT TTCTGTACAACAAAACGAATATCGCGAAATTGAACCTGAATTGGTGGAGA AATTACACGAAGAAGGTGTTGCTCTGACGACCGATGACGCAGACACGACA CTAGATGATGCAGAGGATAGACAACTTTTGAAGAAAGATCAAAACCCATC GTCAACGACTTCTCGATTAGCGCGATTAGGTGAAGGGAATTACGTGGATA TGTCTTCCGAAGAAACATTGAACTGTATTGATGAAGAGGATGAGGAGACC AACAATGATGAAAAAATCCCCCTTCCCAAACGAAGTCCACTCCCTAAACC ACCTCGACATCCTTCAGTATCTGAAACCTCAAAAGCCAACGACGAAGGAT ACAATTCTGCTAGTCATTACAGTGGTGAAAACAACGATAGTAAGGCACCT CTTTTGAATGATAACAACAGAACCAACACAATCCCTTACGAAGATGAAGC AGGTTATGAAGTACCAAAGATTAATCCTTCGCATGAGCTAGAAAACGATG TAGCGCCACCGCAGAAAATAAAACAACGTAAAAAGAAGAAATCTCTCATG ATGCTTTGGAAAGGAAAACATGGCGAACCTGAAGCCAAAGTACAAACTGC ACCTGATGAAGCACATCAAAACTATTATGATCCTCCGGCTGATATCAGAG ACAATTATTTCCTACCCTACTCCAAAAACCCGACAGTTCGAGTCGCTTTG AGTTTTATCGCAGCTCTTGGAATATCCGTCACGTTGTTTTTAGTGTTACT GCTATTAACGAAACTACATCCCGTGTTATGTTTCAGTGTGGCTACTGTTA TTTTCATCGTGCTTCTCGTGGTACCAGTCACGTTATACCATCGTGGTATA TTTTGTGTTATCATGCTTTTATTTCCAAGCTTGTTTGGTTATCGTTGTAA GATCGTCGCTTTCATGTTGTTGATCGTATTCTTAATCCTGGGTCCAGTTT TCGGTACAGCTGATAAAATTCACATAGCTCGCTCATGTGCGAACAATGAG GATTTTTTCTATAATTCCACTGTGGTTTCTGGTACATTACAGGACGACTG TATGTATAAGTTCGGTAGAATTGCTGATACTTGCTCAGGattattcaatg atttcaatCGCTCATGTCGCACTTGGTCTACTCCTAAAGACGGCTACGAA CAATTTCTATGCAATCAAACCAAAGATTTCTTCTGTCAAACTAAAAAGCA AGCTGAATCTATTTGTGCTTCGACCACTATAATGACAAACACTTACAATG AGAAGTTGGAAGTCACTTACACATTAAAAAACATTGTATTTTACCTGCTG CCTTTCTTGGCATTAATGGTTCTCGCTGAAGCTTACAATTATAACAAAGT GTATCTGACCAcgaaaaacaaagacaatattTACATCACACAACGCTTGC GTGAGCTTGATACCGAACGCCGTAACCGTGGTCTCACTGACTTAATTTTA CCTTTAACCCGTATCGAACTTTACACATATCTAGTTCGAGGAAATGTGAA CACAACTAAAGCTGAACGAAATCGTATTTACAAATGGCTGGTGTATTTAT TAGTAATGGTTTTTATCACTGTCTGTCTCGTTCTGATCGAGAATCATGTC GATATCCTTCTAACAGCCGTGTTAACGAAGAAATGTCTTGCTCATTACGA GCAGAATAATCATTATCGCTATAGAGTTGTCATTTACGCTCTTCTTGGTA CAACGCTTTTCATCATTTTAATGCAAAGTCATGTTTTACGGTTACGAAGT GTTGTTTGCGATTACATTTATCCTGAAATGGTTGAAACACGTTCCAAACA TTTATATTATAAAATTCTTCACGATAGACACGCATTTGCGAGACACGTTC GTCGTAAAATTCAATTGCTATCTGAAGAGAAGAGGTTACGACTTcgcatt tcatttttttcgaaaatttacaACGTTTTACCGACCAGATTACAATGGGT TTGTGATAAATTTACTGTCAGGACTTGCATGATTTGTGATTCTTTATCGT ACCGTAAAACTGTCGAATGTAACGAGAATTCATGCCGTGCGCATTATTGT TTTGAATGTCACGTCGATGCTGGTCAAAATTGTTTGACGTGCAAAGTACC TACACCCACATCGAGAAACAGTACAGTACCTGCCCCTAGGTcaagttttt gtgtgtaaaaacaCTCATTCACAATCAGTCTTAGATCTTAGTCCCTAGTC TGGAAATATTTATCAATAAATCGATCTATTTAAACTAAATTTACTAGATG TGGAtagattttttttagtttttcgtAATAAATTGATTTAATTCAATTTT GAAGTAAAAGGATGATATGAATTAAGATCTTAAAGCTGATACGCGAGGAT AAAAAGCTAACTGTCCTAGCTACTTATTGATGCTGCTATTCATTTTGCAA TGAAAGCTTCTCATTTTAATAAGCCTTCTCATCTGTTTTCGCAATCAAAA TGGTTCTGAGATTTGTTTTGTCCTATCTGTGACTCTTATTTACTTCCTAA GTGTCAGCTTTGAAGCTTTGAATCAGACTTTTTAAATAGCGctactttgt ttttgaaatgacACACGTAAAGGTTTCCTTTGGTAAATGTTTGTACTTTG GTGAAAGCTTATAAACGTGAGCCCACAAGTTTCTTTCACCTCGTTAAAAT CTTAAACTTTGTGGTCTAACCGTTTTGTATAAGATGTAACAAGAGATTGA GCTAACCTTTTCACCTCAGATGGTataattttcatccttagtaaAATACA CAAATCCTGTTCGTCTCTCTCGATCCCAAAATTTGATTTctcaaaacaaa caatttcTAAGACTCAAAGTGTAAATAGGTTGGACTAACTGATCTGAAAA TGTGTTTGTATTCTGGGACTAATTAGAATTGACATGACTTTATTCCTGTT TCCTTTAGTTACCGAATTGGAACTTTTGCGACTTTTGATGCCTTATTTCA TGAAATCTTCCTTTTCCAATTATTTGAGATGCCTGAAGGAACTAATTGTC TTTGTCTTTTTAATTTgacattgaaatatttttgttgtaGTAGATTATTT TCGTGTAAAATAGATAGTATTTCATTTTAGGAACATTTTTAAACGacaaa attgtaaatatagaaacttcaaaaattttattcaacAGTGAGAGAGACCT TCAATTTCTCAGAATAAGTTTGTTCTCACCCCTCACAAGATGAATTTGGT CCATTTTGTGTAAAAATACCCTTTCTTTCCAGTATCA

Coding sequence (CDS) from alignment at scaffold_139:53152..56938

>TCONS_00047945 ID=TCONS_00047945|Name=TCONS_00047945|organism=Clytia hemisphaerica|type=CDS|length=2349bp|location=Sequence derived from alignment at scaffold_139:53152..56938 (Clytia hemisphaerica)
ATGACGACGGATGACAATAACGTGTATCAAGTCATTGGTAACTACGAAGT
AGTAGACACTGGAAAGAATGAATATCTAGTCGCTTCAAAAGGAGATATTA
TTATAGACTGTGAACGTGTTGATGATAATTGGTTCCGTGGCAAAAATATT
CGATCTGGAACTTACGGTTTAATACCAACAGCCAACGTTGTTTCTGTACA
ACAAAACGAATATCGCGAAATTGAACCTGAATTGGTGGAGAAATTACACG
AAGAAGGTGTTGCTCTGACGACCGATGACGCAGACACGACACTAGATGAT
GCAGAGGATAGACAACTTTTGAAGAAAGATCAAAACCCATCGTCAACGAC
TTCTCGATTAGCGCGATTAGGTGAAGGGAATTACGTGGATATGTCTTCCG
AAGAAACATTGAACTGTATTGATGAAGAGGATGAGGAGACCAACAATGAT
GAAAAAATCCCCCTTCCCAAACGAAGTCCACTCCCTAAACCACCTCGACA
TCCTTCAGTATCTGAAACCTCAAAAGCCAACGACGAAGGATACAATTCTG
CTAGTCATTACAGTGGTGAAAACAACGATAGTAAGGCACCTCTTTTGAAT
GATAACAACAGAACCAACACAATCCCTTACGAAGATGAAGCAGGTTATGA
AGTACCAAAGATTAATCCTTCGCATGAGCTAGAAAACGATGTAGCGCCAC
CGCAGAAAATAAAACAACGTAAAAAGAAGAAATCTCTCATGATGCTTTGG
AAAGGAAAACATGGCGAACCTGAAGCCAAAGTACAAACTGCACCTGATGA
AGCACATCAAAACTATTATGATCCTCCGGCTGATATCAGAGACAATTATT
TCCTACCCTACTCCAAAAACCCGACAGTTCGAGTCGCTTTGAGTTTTATC
GCAGCTCTTGGAATATCCGTCACGTTGTTTTTAGTGTTACTGCTATTAAC
GAAACTACATCCCGTGTTATGTTTCAGTGTGGCTACTGTTATTTTCATCG
TGCTTCTCGTGGTACCAGTCACGTTATACCATCGTGGTATATTTTGTGTT
ATCATGCTTTTATTTCCAAGCTTGTTTGGTTATCGTTGTAAGATCGTCGC
TTTCATGTTGTTGATCGTATTCTTAATCCTGGGTCCAGTTTTCGGTACAG
CTGATAAAATTCACATAGCTCGCTCATGTGCGAACAATGAGGATTTTTTC
TATAATTCCACTGTGGTTTCTGGTACATTACAGGACGACTGTATGTATAA
GTTCGGTAGAATTGCTGATACTTGCTCAGGattattcaatgatttcaatC
GCTCATGTCGCACTTGGTCTACTCCTAAAGACGGCTACGAACAATTTCTA
TGCAATCAAACCAAAGATTTCTTCTGTCAAACTAAAAAGCAAGCTGAATC
TATTTGTGCTTCGACCACTATAATGACAAACACTTACAATGAGAAGTTGG
AAGTCACTTACACATTAAAAAACATTGTATTTTACCTGCTGCCTTTCTTG
GCATTAATGGTTCTCGCTGAAGCTTACAATTATAACAAAGTGTATCTGAC
CAcgaaaaacaaagacaatattTACATCACACAACGCTTGCGTGAGCTTG
ATACCGAACGCCGTAACCGTGGTCTCACTGACTTAATTTTACCTTTAACC
CGTATCGAACTTTACACATATCTAGTTCGAGGAAATGTGAACACAACTAA
AGCTGAACGAAATCGTATTTACAAATGGCTGGTGTATTTATTAGTAATGG
TTTTTATCACTGTCTGTCTCGTTCTGATCGAGAATCATGTCGATATCCTT
CTAACAGCCGTGTTAACGAAGAAATGTCTTGCTCATTACGAGCAGAATAA
TCATTATCGCTATAGAGTTGTCATTTACGCTCTTCTTGGTACAACGCTTT
TCATCATTTTAATGCAAAGTCATGTTTTACGGTTACGAAGTGTTGTTTGC
GATTACATTTATCCTGAAATGGTTGAAACACGTTCCAAACATTTATATTA
TAAAATTCTTCACGATAGACACGCATTTGCGAGACACGTTCGTCGTAAAA
TTCAATTGCTATCTGAAGAGAAGAGGTTACGACTTcgcatttcatttttt
tcgaaaatttacaACGTTTTACCGACCAGATTACAATGGGTTTGTGATAA
ATTTACTGTCAGGACTTGCATGATTTGTGATTCTTTATCGTACCGTAAAA
CTGTCGAATGTAACGAGAATTCATGCCGTGCGCATTATTGTTTTGAATGT
CACGTCGATGCTGGTCAAAATTGTTTGACGTGCAAAGTACCTACACCCAC
ATCGAGAAACAGTACAGTACCTGCCCCTAGGTcaagtttttgtgtgtaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_030506XLOC_030506Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047945-proteinTCONS_00047945-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00047945-exon-scaffold_139-1491911889:53152..56938TCONS_00047945-exon-scaffold_139-1491911889:53152..56938Clytia hemisphaericaexon
TCONS_00047945-exon-scaffold_139-1510915933:53152..56938TCONS_00047945-exon-scaffold_139-1510915933:53152..56938Clytia hemisphaericaexon
TCONS_00047945-exon-scaffold_139-1575043694:53152..56938TCONS_00047945-exon-scaffold_139-1575043694:53152..56938Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_139supercontigscaffold_139:53152..56938 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.39258 4.02239 7.95985 8.29272 16.9686 11.9507 11.8556 12.6864 4.43683 5.43364 4.77173 3.46693 6.53515 5.50616 6.30601 8.30808 11.2546 14.2899 8.16883 6.93774 8.76242 9.21669 8.98147 10.2947 10.1029 11.3824 9.97957 5.16562 11.2806 13.0741
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR012858DC_STAMP-like
IPR001452SH3_domain
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00047945 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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