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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047487 ID=TCONS_00047487|Name=TCONS_00047487|organism=Clytia hemisphaerica|type=transcript|length=1430bp
cggctGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCATCAAGGTT
TTGGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATGATCCTTGC
AGATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGAGAATTTTA
CTTTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGGacttaaaa
tcttcaaaaggacagaatgtttttaaaagattggCATCTTCATCTGATGT
TATTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGGACTTGGAC
CAAATACATTACTGGAATCAAATGAGAGGCTTATCTATACACGTTTAAAT
GGGTATGGTACAAAACCAACACCTCTTTCACAGAAAGCTGGACACGATAT
CAACTATTTAGCAATGACAGGTGTCTTGTCCATGTTGGGTcagaaagGTA
ACAAACCTGAGCCACCGATCAATTTGCTTGGTGATTTTGCTGGAGGAAGT
ATGATGGCTGTTATGGGAATAATGATGGCTTTGTTTGAAAGAAGTGTTTC
AGGAAAAGGCCAGGTTGTCGATGCGTCAATTACAGCGGGCGCGTCTTACG
TATCATCTTTTCTACACCGATCACGTGACATTGGTATTTGGTTGGGTGAG
CGAGGCACGAACGTCTTGGACGGAGGGGCTCCTTTTTATCAAGTGTACCA
AACGAAAGATGGAAAATATATGACAGTTGGGGCGATCGAACCACAATTTT
ATCAAGAACTTTTAAAAGGTCTTGATGCAGAGGATGATGAAACGTTATCT
GTTCAAATGAACGTATTAGAGTGGCCTAAAATGAAAACCAAAATGGAAGA
CATTTTTGCTTCGAAGACGCAAGAAGAATGGTGCCAAGTCTTTGAAGACA
AAGATGCTTGCGTCACACCGGTGCTAGATTTTCTTGACGCTCACGAACAC
GCCCACAACAAGGCAGCTGGTTCGTTTATGTATAATCAAGAGCACGGGCG
TTATGAACCAACGCCCGCCCCTGAACTTTCTCGAACGCCCGCGCGTGAGG
AAATTTTGCCGGAACCGAATATAGGAGAACATACTGTCGAATATTtgaga
aatgagaattttacgAAAGCCGAGATTAACAAGTTATTAGATGAGGGTAT
TATCGAACAGTTTACACCAAAGGCATCTTTGTAATGGTCTCAACGAACGC
TTTTCAAGAATTGTTGCTGAGACTTCATCACTAAGTATGCTGGAGCAATT
TGGGATACAATATTATGTTTTTAGCATTCTCTTTCgattgttatttttga
ttttgatttaattGTGCCGTCTCTAGAAGACTGGTGACttcttaaccctt
tccggacgcatgatttcacggctatatgacgcaaacaaaaattcgatttt
tgactGACTTTAcgaaaattgcaatagaaa Run BLAST on NCBI transcript from alignment at scaffold_13:106065..115478- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047487 ID=TCONS_00047487|Name=TCONS_00047487|organism=Clytia hemisphaerica|type=transcript|length=9414bp|location=Sequence derived from alignment at scaffold_13:106065..115478- (Clytia hemisphaerica)
CGGCTGCAGCAGGGGTCACGAGGAAATTGCCCCTGAATGGCATCAAGGTT
TTGGAGCTTGCCGGGCTTGCCCCTGTACCATTTACAGGAATGATCCTTGC
AGATTTTGGAGCTAAAGTATGCCGAGTTAATCGAACCAATGAGAATTTTA
CTTTGGACTCTCTTTCTCGTGGAAAACAATCAATTTGTTTGGACTTAAAA
TCTTCAAAAGGACAGAATGTTTTTAAAAGATTGGCATCTTCATCTGATGT
TATTATCGAGCCTTTCAGACCAGGCATCATGGAAAAGCTTGGACTTGGAC
CAAATACATTACTGGAATCAAATGAGAGGCTTATCTATACACGTTTAAAT
GGTAGGAACTAAGTTGTTTGGAGAACGCGACACAGCCTATTGAATAAGTT
TGAATAACAAAGAAATTACTCCAAATAAATTACTTTCCCTCAGCCAATAT
AAAAATGTGATAAATTATTTTGTCTCTAGGCAGTTAGTCACACTACTAGC
ATCCCGCCAAGATGTGTATCAAAGATTAATGCTGCGAAAGCACTTTATCG
TTTACTTCACTAGCAACCAAACAAAAGTTGTTATATAATTCTGTATAATT
GTTCGACCTGGAGAAAAGTCAGTTTAAAAAAAAAAGCTTTCGAACTGCTT
TTTCAAATTTAATGTACCATTAGTTGGTCTAATATCGACATCCCTCGTCC
AATTCTGACACCCTTCTTTAGAGACAGGAATAATATGAAAGCTTGAATCA
CTGATTGAAAAAGGATTAATCCTCTGTGACCACTAAGCAAAGACAAACAG
TTTCAACTTTTCTATCAATTTCAGCTGTTAAAAAGGGTGCCGGAATTAAA
GGAGGGATGTCAACATTAGACCAAGTTACGGCACGGTACGATAGCTCAAA
ATTCAAGTTAGGCGGCGGTCGAAAAATTGTTCTGTTCGCGTCGCAACAGG
TGTTAAAAATGCATGCGGGCGGACGGCTGGTCGGAAAAATTCCCGTTTTT
TTTTAAATTGCTTCTGTAAGTCAGGGGCAGGTGGTGACACAAACAGAACA
ATTTTCTGATGGTGGCCAGAGCGATCAAGAAAAAAGCTATACGTCAAAAG
AACAATTTGCCAGAAAATCAGGGGAAAATATGATGCGGGCGGGTGATGCG
AATAGAACAATTTTTCGATGGCCGCCTTAGATCATCCTCTATACGATTAA
TAAAGAATGAACAAAAAATTTAAATCTTGAAGCTCACAATATTTCGACAA
ACCTGTAAACTTTTTTTTGGATGCACTCGGTACCGTCAACTGCTCTAACT
TGGGTTGATTGGTCAAAACATGGGACTGGTTGATATCTGGTCTGTATTTT
CACTAACTCTTAAATCTCTTTGACGACAAATTTGTTTTCGTTTGACCAAT
TTAAGATATATTACATATTTTTACCAAAAAGTTGTTATCCCCCTTTTTTT
TATTTAATACCCCCTAAAAACTCAAAAGAAAATCTCTTATCCCCCCTATG
AACCCTTTCTTGAGAAGTTGGATCCCCTTAAAGAAGGGGGGGTTCACACT
TATGGCTAAATAAAAAACTAAATCCTGGAATATCGAAGTTCCAGCCGCAC
TGTTCTGCTAGCTTTCTCAGCTCAATCCTCAACCCGCGCAAAACTTAGCA
GCAGCAGATCATTCCAATGGAAGTTGTTAGAATGTTAGTTAACACCAGCA
GAGTAAACGCATGTTTGGACTATGTACCCTATGCTGCACAAAGCACTTAA
TCTAAAGTCCCCCAAAGCATGGCTTGGCAGCAGGTTTTAGGTGCCCCCTA
AGAATTCAGGTGACCCCTAAGATTTAGGTAACCCCTGGTTGCCAAATATT
TTAGGTGCCCCCTAAGAATTCAGGTGACCCCTAAGATTTAGGTAACCCCT
GGTTGCCAAATATTTTAGGTGACCCCTAAGTCAACACAGATTGCTTGAAA
ATGCACTCAAAACATGCACTTATAAGACAATTATGACAAATTAAAAAAGA
AAAAACTTTGCATTTTGCAAAATAACCATTTTCGAAAAAATTATTGGGGG
CATAGCCCCCCTTGCCTCCCCCCCAGTTGCTACGGCACTGCAGATAATAT
ATTAGATACCAAATTGTCAGTTTTTGAGCATTGCTTAGATTAAAATATAA
GATGAGAAAGTGCCAACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTG
CAAAAGTTCTAGGAATGAAAATAAAGGGATAATGATAATTGAATACTATC
CACTGATGATCCGCGGCACTATTGTAAAGCTAGAATCGCTTTGCGAGCGT
ACTCATCGCTTGAGAAAATGATTGACAGATTAAATTTTTTCACCCCCGCG
GGTGTTCTGCGAGCGTTCTCAGCTCAATCCTTGGACCGCGCTAAAATGGT
AGACTTTGACAGGTCATTTCGATGGAAGTTTTTTGAATGTTTACAAGGCT
CTTGACAGAAAATCCTTTGTTTTATTGTCAATGATGACAGTGCTGTTATT
AATTTTGTTAAATCTGACACATTGATGTTTGTAAGTGCACTTTGTAGTTT
TGATTGAAGAATCATATTCTGGTTTTCATGTTATTATTAGATGCTGTTTT
AGAGCTTTAGAGCTAGGCTGACCGGACGGTCGTAATCGATCGATTAGTCA
ACGATGGGTATCGATGAGCAAGCGATTAATTTTGATTACCTTGTGGTTCG
ACTATTATCAATTATTCATCGATTGTCTATCGATGAGTTATCGATTGTTT
GTTATCAATGAGCTATCGATCAATATCGATTACCTTAAAGCATCGATCTT
ATCGATCTTATCGATTTTACATTGATTATTATCGATTAGATTTTAAAAAA
GTAGACTTTTTCGATTCTTCCTTTTTGAACTTTTCTTGTTGATAGGGACT
TTTAATTTTATCGTATCGATGAATAGCAGAATGATGAATTAGAGAGCATC
AACTCAGTAACGTGGCCTGGCTCGACCTGCGTGGTTTTCACACAAACGCA
ATAATGAAAAATTTACCGCCAGATTTAGAAAAAATTATCACTCGAAAAGA
AAGAAATGGTGCACTAAGGCTTCACTTTTTCTTGCCGGAGCAAAATTGTC
TATAATTAGCCCGCCATGCGATTTTTCTAACACTTTGCTGGTCTATTACT
TCGTAATTGTATATTACGAAGTGACGTCAATCTTCCGACACGAAATCATG
AGGGTAGGGATATAACGTTACTTACTCCAACAGGGCAAATTCAGGAAAGT
TAATGCTCGCGAAAATTTCTTAATCTTAAAAATCTATAAATCAATAAATC
AAATATATTTCAAGTTAAAAATTTTCCAAACATTAATAATAGTTTCATGC
TGCTTACAGCAACAATCGTCAGATGTGAATGAAAATCAAAAACATACTCT
TTCTTATCTACAGAAATTAAAAATTTAAAAAAATAGATTTAAGTGTTAAA
AAGTGATAAAATGATGCGTGCCTATTAAAAATAATTATCGAGTGTGTTAA
AAAAACAAAAGGAGTAAAATACTATTATTTGTCCGGTGGGACCTCTTTAG
AATCTGTAAAACTCCAAAATGGTAGTCGAAATCGCCAATCTCGGAGTGTT
AAAGAGTCTCTCTCTCTCAAAGGAAAACATCAGTTGGGAAAATTGCATGC
ATTTCAATATAAGAAACGCCGAATCTAAGATCATCGCAGCACCTTCCGGG
AATTGCGGTATGGACGAAATACTTTAGGCGTACAAATTTTCGCGAGCAGA
AACTTTCGCGAGGTCGAACAATTTCGTCATTGGGTTTGTTGCTTGAGTCA
TTATGTAATGGTTTCCCTACTAATTTTTCGAGTCAAAATGGTACTGATCA
GGAGAGGTAAATTGAAGATTTTATAAAAATCAGCTGTCATAAAAGTATTA
AATAACGAGAATCTCATTTCTTTAAAGTATTGAAATAAAATTTTAAAGAA
TTCGATAAAACCAATTTTTTTATGAAATGAAAACCGCCCCAAAAGTACTT
TAACAAACAAAATTTTTCATTTCTTCATAATAGGGTATGGTACAAAACCA
ACACCTCTTTCACAGAAAGCTGGACACGATATCAACTATTTAGCAATGAC
AGGTGTCTTGTCCATGTTGGGTCAGAAAGGTTTGTTTTTGAAAAATTTTC
ACTTTTTTGATTTATATGCCCCAGTAAATCAGTCTTGAAACCTGAAATCT
TTCTTATATTCCATCAACTATCTCTATCATTTAAGGCTTGGGGACACGAG
AAGTTTTTTTCGCGTTGGTGCAATGCAACATGCTCCATCTCACCAACCTG
AAGCGCTTTCTCGTGTCTAGTCGACAAAACTTTTAATAACATTTATGTGT
TTCTCACTTTTGTCCCATGGACAAAATCAGCGTGTCTTTTGGGTATTTCC
CTCACTTTTTGTCCCATAAAACCATAAAAGAAACCATGAGACATGCACTG
TTTTCTTGTGTTGGTGAGATGGAGCATGTTGCATTGCGCCAATGCGAAAA
AAACTTCTTGTGTGCCCAAGCCTTTACTCTCGCGGAACTTTCATTTCAAA
GTTGGAAGGTTTGTTACAGTTGTTCCTATGACACACCTGATAAAGATTTA
TCATGGTTGGTGATAAGGGACGGGCTATAAAATCAATTTGTTTCTTGATC
TGATGGTTAAAACAGACTTCTGTGTTCCTATTTGGATTCTTTTAAAATTT
GTAGCGAAAACTACTGTGATCCGCACGGCTTTAATTAACCTTTTTCATGG
TTCTATTAATTCCATGCAATTTCTGTATTGCCTAATAAATCAATAAGCTT
TTTGGATACTTATAGCCTTATCGGCGACGTTCTTAAATACAAATGCTAGA
AAAAGCCAATNATTTCTCACTTTTGTCCCATGGACAAAATCAGCGTGTCT
TTTGGGTATTTCCCTCACTTTTTGTCCAATAAAACCATAAAAGAAACCAT
GAGACATGCACTGTTTTCTTGTGTTGGTGAGATGGAGCATGTTGCATTGC
ACCAATGCGAAAAAAACTTCTTGTGTGCCCAAGCCTTTACTCTCGCGGAA
CTTTCATTTCAAAGTTGGAAGGTTTGTTACAGTTGTTCCGATGACACACC
TGATAAAGATTTATCATGGTTGGTGATAAGGGACGGGCTATAAAATCAAT
TTGTTTCTTGATCTGATGGTTAAAACAGACTTCTGTGTTCCTATTTGGAT
TCTTTTAAAATTTGTAGCGAAAACTACTGTGATCCGCACGGCTTTAATTA
ACCTTTTTCATGGTTCTATTAATTCCATGCAATTTCTGTATTGCCTAATA
AATCAATAAGCTTTTTGGATACTTATAGCCTTATCGGCGACGTTCTTAAA
TACAAATGCTAGAAAAAGCCAATTTTATATTTTATTTATATCATGATATT
TTTAGGTAACAAACCTGAGCCACCGATCAATTTGCTTGGTGATTTTGCTG
GAGGAAGTATGATGGCTGTTATGGGAATAATGATGGCTTTGTTTGAAAGA
AGTGTTTCAGGAAAAGGCCAGGTTGTCGATGCGTCAATTGTAAGTACCTT
GATTGATTTTTCGACCTACCTTGGAGGTCCTTTAAATTAACCTTTCTTCG
TTCGTTCGTTCGTTCATCCGTCCTTTTGTTCGTCTGATGTGAACTTTTCT
CAGGATTGGCTTATTAGCTTTTCTGTTTTTTTTCATCATGATGTAAAATG
GTAATGTCGAAAATGTGAAAGAGCCCGATTTTCGAAAAAAGATTCCCCTC
CGGGAAAACCGGTTTTTAAGCATTTTCTCGAGATTTTATCATTAGTTTTT
TCTGAGTTTTTTCACTTTTCAATGAAATCTTGGTAGCCGGAACTTTCTAA
GAACCGCAACAGTCGAGAATCGCCGGAAAAATGGTTTTTCTTTAATTTCT
CGAGTTGTATTTGTTGAGTTGGCATTTTCTTACTTTTGCTCCCATTTTTT
CTATTTTTTTATTACATCAGCCTTCAGGTAGGTCCATTCAACATGAAACT
TGTTCTAATTGATCTTAAAATTTATTCATGATAAGTATGGACCCCTCTTA
ACCTCTCTATAATAACATTTGTAGAAACAAATCTTTAGGAATTTACTCTA
ACCCAATTACTGTATTACTTCAAATAAACGCCCCTCCTAAAAATCAAAAA
AATTGATAAACACCCGAGCGTTTATTCGAATTAATACGGTACACTGACAT
GATTTCCATTTTAAAGCCTTAAGAGACCCTAAGTACAGTGGAGTCTCTTC
AACTTGAACGTCTATGACGTCTCGAATGTCCCCTTAACTCGAAGTTTTAT
TGACGGCCCTATCAGACGGCCTTATAAACCTCACTCCAAACTCCAAACAT
CGAACAAATTTGTGTTCCCCTTGTGTGTTCGAGTTATGGAGACTCAACTC
GGATTGATTCTCCCAGATGAATTTGTAAGATTTATTAGCGTATAGCTTCC
TTTATCTGGAGAGAATTTTATTTTTCCACTTTATTACTGTGCAATTATTG
CGAACGTAGCCTTCGTGAAGAGCATTTTTATTTATCTCAATGAGACTGTT
CATCTAACATTTCCAGACCATCTAAAAAGAACGACAAATAACTATAAAAA
AGCGACAAAAAGAACGACAAATATTTAAAGAAAGACAAATTTCATATTTC
GCCGTCCACAACCCCGACCGAAATTGACTGTACCACAGATTCATTCCTCT
TTCTTTATCACGGGAATTAACTGCATGTGGTTTAAAAGAACGGCAAATTA
CGCTTGCGTGTAGTTCTCTATTTGGGTGAACTGGAAACATTACATGAACT
AACTCCAATAACACCTTTTTGTAGACAGCGGGCGCGTCTTACGTATCATC
TTTTCTACACCGATCACGTGACATTGGTATTTGGTTGGGTGAGCGAGGCA
CGAACGTCTTGGACGGAGGGGCTCCTTTTTATCAAGTGTACCAAACGAAA
GATGGAAAATATATGACAGTTGGGGCGATCGAACCACAATTTTATCAAGA
ACTTTTAAAAGGTTTGTTAAATGTTTTTTGTATGTATGCGTGTTTTTTAT
AAGCATTGCATTTATAAGCATATCAAGGCTCAAATAGGACAAAATTTAAA
ACATATGCTTCATTACCCTTACCTTTATTTAGCTTGTCTTTTCAGGATTT
TCGGAATTTCCCTAAAATTTAGCTTAGGATATAAACATCCTTCAGGCATT
TTTCAGCCTTTCCAACCTCTCGATCTAAGCATGCTTACGTGAGATTATAA
AAAAAAATCATAATTATGATTTCTTTTTTTCAATTCTTAACTGCACTTTT
CCTATAAAGTAAAAAAAATAAAAAAACATCTCTAGAAGGAAAAATATATA
TATATTAGAGCTATGTAGGAAGATAATCAAACTAAAATAAGGCACCACTA
AACCGTTCAGAGTCAAGAATAAATTCAATGACAAGATTAAACATGACAAA
AAGGAATCGATTTTATCCGTCAATATCTTTATTTTCTTATTACATTTGGT
AGGTCTTGATGCAGAGGATGATGAAACGTTATCTGTTCAAATGAACGTAT
TAGAGTGGCCTAAAATGAAAACCAAAATGGAAGACATTTTTGCTTCGAAG
ACGCAAGAAGAATGGTGCCAAGTCTTTGAAGACAAAGATGCTTGCGTCAC
ACCGGTGCTAGATTTTCTTGACGCTCACGAACACGCCCACAACAAGGCAG
CTGGTTCGTTTATGTATAATCAAGAGCACGGGCGTTATGAACCAACGCCC
GCCCCTGAACTTTCTCGAACGCCCGCGCGTGAGGAAATTTTGCCGGAACC
GAATATAGGAGAACATACTGTCGAATATTTGAGAAATGAGAATTTTACGA
AAGCCGAGATTAACAAGTTATTAGATGAGGGTATTATCGAACAGTTTACA
CCAAAGGCATCTTTGTAATGGTCTCAACGAACGCTTTTCAAGAATTGTTG
CTGAGACTTCATCACTAAGTATGCTGGAGCAATTTGGGATACAATATTAT
GTTTTTAGCATTCTCTTTCGATTGTTATTTTTGATTTTGATTTAATTGTG
CCGTCTCTAGAAGACTGGTGACTTCTTAACCCTTTCCGGACGCATGATTT
CACGGCTATATGACGCAAACAAAAATTCGATTTTTGACTGACTTTACGAA
AATTGCAATAGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047487-exon-scaffold_13-1575043694:115128..115478 | TCONS_00047487-exon-scaffold_13-1575043694:115128..115478 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1575043694:110100..110195 | TCONS_00047487-exon-scaffold_13-1575043694:110100..110195 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1575043694:108690..108823 | TCONS_00047487-exon-scaffold_13-1575043694:108690..108823 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1575043694:107218..107404 | TCONS_00047487-exon-scaffold_13-1575043694:107218..107404 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1575043694:106065..106726 | TCONS_00047487-exon-scaffold_13-1575043694:106065..106726 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1510915933:115128..115478 | TCONS_00047487-exon-scaffold_13-1510915933:115128..115478 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1510915933:110100..110195 | TCONS_00047487-exon-scaffold_13-1510915933:110100..110195 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1510915933:108690..108823 | TCONS_00047487-exon-scaffold_13-1510915933:108690..108823 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1510915933:107218..107404 | TCONS_00047487-exon-scaffold_13-1510915933:107218..107404 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1510915933:106065..106726 | TCONS_00047487-exon-scaffold_13-1510915933:106065..106726 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1491911889:115128..115478 | TCONS_00047487-exon-scaffold_13-1491911889:115128..115478 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1491911889:110100..110195 | TCONS_00047487-exon-scaffold_13-1491911889:110100..110195 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1491911889:108690..108823 | TCONS_00047487-exon-scaffold_13-1491911889:108690..108823 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1491911889:107218..107404 | TCONS_00047487-exon-scaffold_13-1491911889:107218..107404 | Clytia hemisphaerica | exon |
| TCONS_00047487-exon-scaffold_13-1491911889:106065..106726 | TCONS_00047487-exon-scaffold_13-1491911889:106065..106726 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_13 | supercontig | scaffold_13:106065..115478 - |
Blast
BLAST of TCONS_00047487 vs. Swiss-Prot (Human)
Match: AMACR (Alpha-methylacyl-CoA racemase OS=Homo sapiens GN=AMACR PE=1 SV=2) HSP 1 Score: 409.838 bits (1052), Expect = 2.810e-139 Identity = 201/385 (52.21%), Postives = 265/385 (68.83%), Query Frame = 3
Query: 27 LPLNGIKVLELAGLAPVPFTGMILADFGAKVCRVNRTNENFTLDSLSRGKQSICLDLKSSKGQNVFKRLASSSDVIIEPFRPGIMEKLGLGPNTLLESNERLIYTRLNGYGTKPTPLSQKAGHDINYLAMTGVLSMLGQKGNKPEPPINLLGDFAGGSMMAVMGIMMALFERSVSGKGQVVDASITAGASYVSSFLHRSRDIGIWLGERGTNVLDGGAPFYQVYQTKDGKYMTVGAIEPQFYQELLKGLDAEDDETLSVQMNVLEWPKMKTKMEDIFASKTQEEWCQVFEDKDACVTPVLDFLDAHEHAHNKAAGSFMYNQEHGRYEPTPAPELSRTPAREEILPEPNIGEHTVEYLRNENFTKAEINKLLDEGIIEQFTPKASL 1181
+ L GI V+EL+GLAP PF M+LADFGA+V RV+R + + L RGK+S+ LDLK +G V +RL SDV++EPFR G+MEKL LGP L N RLIY RL+G+G + + AGHDINYLA++GVLS +G+ G P P+NLL DFAGG +M +GI+MALF+R+ +GKGQV+DA++ G +Y+SSFL +++ + +W RG N+LDGGAPFY Y+T DG++M VGAIEPQFY+ L+KGL + DE L QM++ +WP+MK K D+FA KT+ EWCQ+F+ DACVTPVL F + H HNK GSF+ ++E P PAP L TPA +P IGEHT E L F++ EI +L + IIE KASL
Sbjct: 1 MALQGISVVELSGLAPGPFCAMVLADFGARVVRVDRPGSRYDVSRLGRGKRSLVLDLKQPRGAAVLRRLCKRSDVLLEPFRRGVMEKLQLGPEILQRENPRLIYARLSGFGQSGS-FCRLAGHDINYLALSGVLSKIGRSGENPYAPLNLLADFAGGGLMCALGIIMALFDRTRTGKGQVIDANMVEGTAYLSSFLWKTQKLSLWEAPRGQNMLDGGAPFYTTYRTADGEFMAVGAIEPQFYELLIKGLGLKSDE-LPNQMSMDDWPEMKKKFADVFAEKTKAEWCQIFDGTDACVTPVLTFEEVVHHDHNKERGSFITSEEQD-VSPRPAPLLLNTPAIPSFKRDPFIGEHTEEILEEFGFSREEIYQLNSDKIIESNKVKASL 382
The following BLAST results are available for this feature:
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