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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00047267 ID=TCONS_00047267|Name=TCONS_00047267|organism=Clytia hemisphaerica|type=transcript|length=1093bp
CTATCGTTTGCTCAAGTTCGATTGAGTTTGATTAGTTCAGTGAtagaaca
gttcgattgacatcacCTGGTTTAGGTGGGTAGGGGTATAATTTGTTGAT
GTTCTTTCGCggcaaagaaattttcacgAGAAAAATTTTAGAGAAGTTCA
TTCCATACCAAATGTTACTTTGTCATGTTTGTTTTTAATCGCTTTGGTTG
TTTTAAAAACCATAACAATCGGCCCAATGTTTATGCCTCAGGTTCTCTTT
GtttgacgttttttttttaatcagctTTTTTGCATTTTGTAAGATTCCTC
AAATCTTTGGGTAAGCAATTGAACAATTTTGGTCCCTGCATACGAATGGA
TGCATAGACTTGGCGTTGAAAGGGACTCTTTATCGGGGGGATGAAACACT
TCCTTCCTTGTCTCTCATTGAAATAGCTCATGTTTTTATTGACTGAGAGA
AtgtaatgtatgtggagtaatttaGCTCGCGATCTCGCTTGGAAGAATAA
AAATGAGGCTACTTTTTTGCCGAATTAGCTATTTTACATACCTCGGAAAa
caactcccataggaatttcAATACCTAACCcaattggttaatttcggaac
ggcttcaagaaagtcataatggcagataatttaaaagtttctgatgaGGA
AACGTGTGAAGTttgttgatgttgatggcttcttgattctgtaaagagaa
aagaaaacaggtatagctttttctaaccaagaaACATTGTAGTTCTAGCT
GCACTGCTGTTAAATGGGAAGAAATTAGGTTCCAATGGTAACAGCAAGGA
CTTCTCATCATCCTTCACTTTTTAGAATCAATTAttaaattcttgatatt
cattaTGTAATCTTTTCTTTGATTGACACTCCAAATCAAGACATTTGGCA
GCTAATATTCGTGGCAAAACATTTGCATTCTCCAAGGAGAGCTTTCTTTG
TCTCAAGAAAGTAACAGCTCCTCTAACCTCTAACAGCTCTGCTgtatttg
aatgatttttaaattgataaaaatcaacaaagaacTTGTAGGCAGTAAAC
ACTGTGTAAAATTGTGTATATATAAGGAACTGTAAGGAAAGCA Run BLAST on NCBI transcript from alignment at scaffold_123:376602..377694 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00047267 ID=TCONS_00047267|Name=TCONS_00047267|organism=Clytia hemisphaerica|type=transcript|length=1093bp|location=Sequence derived from alignment at scaffold_123:376602..377694 (Clytia hemisphaerica)
TGCTTTCCTTACAGTTCCTTATATATACACAATTTTACACAGTGTTTACT
GCCTACAAgttctttgttgatttttatcaatttaaaaatcattcaaatac
AGCAGAGCTGTTAGAGGTTAGAGGAGCTGTTACTTTCTTGAGACAAAGAA
AGCTCTCCTTGGAGAATGCAAATGTTTTGCCACGAATATTAGCTGCCAAA
TGTCTTGATTTGGAGTGTCAATCAAAGAAAAGATTACAtaatgaatatca
agaatttaaTAATTGATTCTAAAAAGTGAAGGATGATGAGAAGTCCTTGC
TGTTACCATTGGAACCTAATTTCTTCCCATTTAACAGCAGTGCAGCTAGA
ACTACAATGTttcttggttagaaaaagctatacctgttttcttttctctt
tacagaatcaagaagccatcaacatcaacaaACTTCACACGTTTCCtcat
cagaaacttttaaattatctgccattatgactttcttgaagccgttccga
aattaaccaattgGGTTAGGTATTgaaattcctatgggagttgtTTTCCG
AGGTATGTAAAATAGCTAATTCGGCAAAAAAGTAGCCTCATTTTTATTCT
TCCAAGCGAGATCGCGAGCtaaattactccacatacattacaTTCTCTCA
GTCAATAAAAACATGAGCTATTTCAATGAGAGACAAGGAAGGAAGTGTTT
CATCCCCCCGATAAAGAGTCCCTTTCAACGCCAAGTCTATGCATCCATTC
GTATGCAGGGACCAAAATTGTTCAATTGCTTACCCAAAGATTTGAGGAAT
CTTACAAAATGCAAAAAagctgattaaaaaaaaaacgtcaaaCAAAGAGA
ACCTGAGGCATAAACATTGGGCCGATTGTTATGGTTTTTAAAACAACCAA
AGCGATTAAAAACAAACATGACAAAGTAACATTTGGTATGGAATGAACTT
CTCTAAAATTTTTCTcgtgaaaatttctttgccGCGAAAGAACATCAACA
AATTATACCCCTACCCACCTAAACCAGgtgatgtcaatcgaactgttcta
TCACTGAACTAATCAAACTCAATCGAACTTGAGCAAACGATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00047267-exon-scaffold_123-1491911889:376602..377694 | TCONS_00047267-exon-scaffold_123-1491911889:376602..377694 | Clytia hemisphaerica | exon |
| TCONS_00047267-exon-scaffold_123-1510915933:376602..377694 | TCONS_00047267-exon-scaffold_123-1510915933:376602..377694 | Clytia hemisphaerica | exon |
| TCONS_00047267-exon-scaffold_123-1575043694:376602..377694 | TCONS_00047267-exon-scaffold_123-1575043694:376602..377694 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_123 | supercontig | scaffold_123:376602..377694 . |
Blast
The following BLAST results are available for this feature:
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