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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00046655 ID=TCONS_00046655|Name=TCONS_00046655|organism=Clytia hemisphaerica|type=transcript|length=1978bp
TTTTTAGCACACCATCACTGATGATAATCATAGGTAGCAGTTCAGTTCGT
TCTGCAATTATATCTGCATCTTTGGGCAACTAAAATCCTACAGTAGAACC
TACACACAATATAGAAAGGTGTTGTGGAGCAAGAGCAAACAAAAAAGAGA
CGTCAATAAACAAACCAGATACAGGAAACACAACAACAAAGTATCAACAA
GGAAAGCGCTCATCAACTATGGTGGCTCCATTTTCCATTCTACTAAAGGA
CAGTCAATCTCAACGTTGAATGAAGAAGACGAAAATCTAACCACAGAAGA
GTCGTCACGAGATATGTTTGCTGAATGTCACAATTTAAGGAAGGTCCCTA
TGGTCAGTGGACCATGTACACCTCGGCCCCGAAGTGGCCACCGCATGTGT
GCCGATGATAATTGTATATACATTTTTGGTGGTTTTAATCCAGCTTTTAA
GACTTTTAACGAGTTATGGAGGTTTAATACGACAACCGAAAAATGGAGTC
TGCTGCCTGACGATGACGGGTTGGCTCCCAAGTCCTGCGCCTCTTCTTCT
ATGGTCATGTTAGGTAGTAACCTATTCGTGTTTGGTGGGACTGGCTACCC
GTTCGCCAAGACCAACTCTAACGAACTTTTTATGTAcagtttgaaaatga
aacgtTGGTTCAACTTAACAGACACTTCAAGTTTAGCCAATCGACAGGAT
TTCGCCAAACACCCGAAagactttataaaaacaaagcagTGCGGATGTCA
GAAGTTTTATGATAGGCAACCAGTTCCGAAATACGGGCAGGGTATGGCTA
CTGCACATCAGAAAATCTATATCCACTCTGGAACTCAAGGCGAGGAATTT
ACAAAGGAACTTCatagtttttctttaaagacATTTCGTTGGACAGAGta
tgaattttgttttgagcatACGCGAAATGCGCCTCAGCCTCGATACCGAC
ATGAACTAGCCTCGATTGATAACCGCCTGTACGTCCTTGGTGGTGCATTA
CTCAACGAGACATTTAATTTCGATCAACTCACGTCATTCAATCTTCAAAC
TCGAAAATGGGAGCAAGAGGCATGTCAATCAAACAAAGGTAGTAGCCCGA
CCACACCTGGAGAGAGCAGACAGCTACCTGTAGGACGTAAAGCTCATACC
TGTGTATCATACAAGAATAAGATCTACATGTGTGGTGGTTACAATGCAGT
AGAAGGAATGTTGGATGATTTTTGGTCGTTTAATGTCAACACCAAAGAAT
GGAAGCAACACAAGAACCGTACATTTCCGTACCCGGTACAATTCCACTCG
TCCGCAGTCACTTCATACGGTTGCATGTACATTCACGGTGGTTTGACAAC
CAAAGGAAACAGAGTCAGTGACCTACATCAGTTGTGGCTTCAAGTACCAA
CACTTACGCGTATGGCCTGGATGAAGGTCGTTCAACAGTTAAGAGACAAT
AACCAACTGACTAAAGAGACCTTGATCAAATTGAAGATTCCCAGACACTT
CATTGGTTTCATTGATGATAAGATTGACGTCATAGCTGCTTGATTTGAGG
ATTCCCTGggatttttgatttccaaactCAGGATGGAAATAGCGTTATAG
TTGACAGGAGATCTTTACATATTAAATGAGATGTCACTAGGTATAATCAA
ATTTTCTAATCAGAGACTTAATTAAAGAACTTCATCTCATTAACTTGCCA
TTAAGGAGGATTTTCTATTTCGTGGTCTTATGATTTCAATAACAACCCAT
TAATGTGCGAGTTTGATATGTCAATTGGACAACGTTGTTTTTCTCTTATC
TTTGATGAGATGATATTTCTTTTGTATATAATTCACTTAATTGGATTATC
ATTTGTGATTCTCTGCCTGTTTAAGTGATCCTTTCACCCTGGGAACGCTT
TTCAAGATACCACATTACAATCGCCTTTATAACAATAGTTATAATGACTA
GGTAGTAGGACCATTTCGAATTAACCGC Run BLAST on NCBI transcript from alignment at scaffold_116:495564..513416+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00046655 ID=TCONS_00046655|Name=TCONS_00046655|organism=Clytia hemisphaerica|type=transcript|length=17853bp|location=Sequence derived from alignment at scaffold_116:495564..513416+ (Clytia hemisphaerica)
TTTTTAGCACACCATCACTGATGATAATCATAGGTAGCAGTTCAGTTCGT
TCTGCAATTATATCTGCATCTTTGGGCAACTAAAATCCTACAGTAGGTAG
GGGCAAAAAGTTTACTTTTAATATTAATCACTAGTACATGATTTGAGAGC
CATTTCAACATTCCATCTTTGAAGCTATGACCTTGTTCCTTGTTAAAAGT
AGGCAGTAGTTAGGTAATTGAGTAGTTACAGTGGAAGATTTGGCAGCTGC
GGTGGGAAATCTATCGTGAATGATGTTGGGCGTCGGGTAAAGCTTGCATC
AGGTGCAGGTGCGATGGAGTGAGGAAAACTTGCACATATATAggcctcaa
atgaatgacctggctggtcattaaaatacaaagttaaattaaaagaaacc
tgatttacaaaaaatttgcgGCTGGTAAAAAGTATAAATATCTCCTAAAT
GGGCTGAAATGGGATGGGCTCTTCCAGTTAAAGTCAGATAACGTGTGTGT
ATATTAATATTAAATTTGAGGTTTAATGTCCAGCCACGTCCAGCAGCCAT
CGCAACATCTGAATTCCCGCCATCTTGATTGAAATTTATGGTCTTGCATG
AATTTTTATCATCCAACCACGCTCttttaccgtgagtggtcctaaatccg
acagccctgcctaaatccgatggggtctttcaaagatacaaactaaaata
atagCAAACTTTTtagctgtgacgcaatgaagataccaaagtgtcaacta
aactgaaagatttgatacactgaaccaattgaaccaaataacagcaattg
cttcttatacaaaacatatttttttattacaaaattgttaacgatTTAAA
CACGAGTAACGGATTCaaaataatagaggtaattatttttacaactcaca
ctttattgatcacattaattgacatcttgacatacatattgttagatgtt
ttgtttccagAGTTCTTGGAGAGGAAATGAAAACATAGAATTTTTCCACA
GCAGTTATTTgaggggtcggatttaggcaaggctgtcggatttaggacca
ctcacggtattcaTCACCCGCAAATATGAGATTCTAAAATGGAAGAGTAG
AGcagcgagcggagctgcgtagttcatttgttttgacattttgctgcttt
gaatggtcaggcatttgatggctatgtaagtttcctccactgatgcaagt
tacctgacttcaccaCAGTAACAATTTTTGCGATATTTGACAACACGAAA
ATTGAAGATTTCAGCAGATTTGTCATCTGCCATGGATTCTATCCATCTTC
TAGGGAACTAATACCTTTAATAACTGGATTCAAGATATTCATGAATTTTG
ACcgtttttcgtgaaaattagtcCTCATGAAAGATTTGAAATTTCAGAAT
GAGTTAAAccccaaggaaaatgaaataatttagtTTAAAACGTGGctgat
tcatgaaaaaattttctgtgtGAAAAATTTAGATTCTTGAGTTACGAGAA
AAGACACAATGTCATGTTAGATTAATTAAAAACTACACTGCCTCAAGCAT
CACAAACAATGATAAGAGCTTTTGATTTTCCAGCCCTGTTGACTCTTCCA
ATTGGTTCAACAATTTTTTCATCCAATGATTTAATTTTGGATTATTTTTG
GGAAACAATTTATCAGGATTACTAAGactgcaaaaaatttttttacttgg
ttGGTAAGATAAGATAAGAATTTTAATAACACAAGAAAACATGATCACCC
TGGGGTgatatttattaaatttttattttcccacCCAAGGGAATTTTTTG
TACTTTCCAAGGTGTCGAATGCACTTTTCCTCACCTGAAAGACATGGTAA
TATTTTCCTGTGTAAAAAGACTTATATGTATAAAATTTGTGAAGATCAGA
ATTAAAAGAACCTTTGTTGTCCTTGTCCTCAGAAGTGAACTTGTTCACTT
TTCGCCTGGAACCATTCAAGCAAATAAATACGCTCTTTCAAGCTGCCCAG
ATTTTACTTTTCCTTAACATGGGCTGACTTTCCAGTGAGTAAAAAAAAGT
AACTTCAAAAAGTTTCATTTGGATTTATAAGCCAAGctctaattttgaaa
tttccaaaaaataatcCTTAATCAAACAGTCAATTGCCTCAATTGCAATA
GTACTTTTTACtacaattttgatttgaatatcacttttcatttttcatat
tcaGCACTTACAGTCTGaataagaaaaaatcaagattcAAGCTGAAAAGT
TTTGTGCTTATTTATTCATATATCTTTTCAACACGCATAACTAAAATGTT
TTTCTGCTCAAAACATGAACTTTTAGCTCCGTTTAGCTGTGTAATCCAAA
TCTAAATTATCATATTTAATAAAACATATGGTTTTTAAAACGCTAGTGAA
ATTGCACAAATTGATATTTGAAAGCATTAAATTTGGGTCAATAAACATAG
TTTTCAAGGAAGAATGAGCGAAAAGTTTCACTTTGACcctttgtttataa
aaaaactgcTAATTAATTAGTTACCAGCTTTCCTGGTGATTAaaatcaat
gaagtataagcccgaagggctagaagtcaatctccttggtaggatttgaa
gccaacaaatcctaccaaaattgcgcggccttgagcggctgcctggtttt
tacacaaatgacagattgaaactaaaatttaccgctaaatttcgaaaaaa
atatcaatcgtataaacaaaggaattgctagattcaatctgtcgtcaaaa
atgcggcgcattttttaaggcttcactttttcttgcctgagaaaggttag
agattgaactcaagcccttcgggctttaaactcaatgattaAAATTATCC
CAAGAGTAATCCTTGACTCATAATTACAATTACGTTCTGACTGACTGACT
TTATGCCCACTGTGACAGATCCTGATTCAGAAAAAAGTTTTATGGGACTG
AATAATTGTTAAAGTCGGTTTTGTTCTTGAGCACTTTTGTCATGCCAATG
ATGCatgtttgaaagaaaaattctcCAAACATTCACATTTCTTATTTGTC
TATTTTTTATATCTCTGCTTTTACAACTTAACAAGAATCATATTTATCAC
AGATAGTCAGTTCAATTTTATGTCCAATGTTTAATGTGCTGTAAATTAAC
CACATTATGTAGGTCCATGAAACTTGTTTATCTCGGTTTGACTGAGTCAA
AATCTTCATTAGGGAGGTCCAATCAATATCCAGCTCAGTTAGACCTTATT
TGAAATACAGGTTGTTATGACCGACCATATTTTAGttataatatttttgt
tttctgtaGAACCTACACACAATATAGAAAGGTGTTGTGGAGCAAGAGCA
AACAAAAAAGAGACGTCAATAAACAAACCAGATACAGGAAACACAACAAC
AAAGTATCAACAAGGTTAGTTTTTTATCAACATTTCTTTTCTTGTTACAC
TTTTTAGCTTTATACAAGGGTGTACAGTGTTGACGCTCTATAATTCGACC
TTCTATTATTCGATGAACTCCATTTTTCGATAACATTGAAAGTCaacgtc
aacaagaaactctcataaacgacgctctactatttggTTCACTCTATTAT
TGATctattattcgatgaaaatccgttCCCCTCTTGTAAATCGAATTCGC
GAGCGTCAAACAACTGTAGATTTTCATTATTCACGTTTTATATACATTTT
CCATAACTacaacatgtttttttataagaaaccttAACTTGGTtccgagc
ctggagttccttatttttctagAGAATTACAGCCtgaaagttccttatcg
agttccttatttactaaGCTGCTAAGTTAGGATTTGCTGAGTACAAACTT
CTTTATGATATAAATTTagtatattttctctttttgacaTATTGAACGTC
GTTTCAGCGATATTTTatcatctttttgtttttaagttaTTGTAATTGTG
TGCAAATTCAAGCTTAACTCTTACTGTTCCTTCAGGTTCCTTAACTTGAT
TTCTTATTCTGAGCCTGAGCAGTtacttataaacgtgttccttataaacg
tgtcccttatataaaaaaacgtgtgtcATAGTTTAAGACTGCTCAGACGT
CTTTAGTGTGAGGTATAAGTATTCTCTTTCGTATCAAATAAGCTGGGCAT
GCTACTACTATTTCATAATCGTACCAATAATACTGTTAAAGAACCCGGGT
TTTTGATTTGTTTACTATGTATATATAACACTTTATTTAAGACGACAGAG
TTCTATTTTTGTATCACTTTTAAAACGGTTATTGTTTATATTGGCAAGGG
TGCTTAAATTCTCTAGATGAGTAAAGGCTATTAATAAACACATGCTTGAA
ATACGTAATATTAGTATTGAAAGTATACTCTTATTACCAAATGAAAATTA
TCACAAGTTCAATCTGTAACTCGAAAATAAAGCTGGGTGTCCaatgtaaa
aaaaaagtttgtcgcAAATACCTGTTGACACAGGTTGACAAAAAATGAAT
CCAGACATAACATAATGTCTGGAATTAAAAATCTGTTTTTATTgcgacaa
aacaaaaaataaaaatagagaatgaaaactttattattcatcttttattc
tttatttcattttgctattcacgtttttttataagaacatcaattttttt
gaagtctttggatgttcttaacttttctttttattttttttcagtggaca
cCCAGCAAAACGGTATGGAACTTTCTTCTCACCAGCGAAAGTTCAGATTA
TAAGTTTGTGGTCTTTTCAATGCAGGGCATTTTGGCTGACTTTTACGCCC
GTTGTGTCCCAGTGCTTTTCAAATAGCGTACCGCGGTGAATCTAAAAATA
TCTGCACACACAATTATTTGTTTGTACGacttgcaatcctttcaatcctT
GCGTTATTTGCTCTTGAACgttaaacataaaattttaaaataaaggtAAA
AACTTTCACGGTTTTCTATAATCATTTCGAAATGAAATACGTGTCTTTTC
TTTTAGAAGCATgtgcaggctcagttttggtacctaaacaatggctctat
tgtttaagaacaatagaatgctaaacATAATAAgagcctgatatagggac
agacatttgcttataaaagaaacttgtatGGGATTGAGACAAATCTGAgt
taaagaatttcttttatttctttgggggtacctgaaaagtgggctgaaac
catgccCTCTTACCTTTTTGAAAGAGGATAACGCTTTAAGGGACAGATTA
GAAAACATGCATAcaggctttttttataagaattcactttataagaatgt
ccatgatgaaaatggccaaaaaattaagaataatgctaagaatattacct
gcatggaattttgctactcaagctaagaatgccattcttagagcattttc
gattataaattgtcaattaccctcaagtaaggctcacttctttcacaaaa
atgccattttatgattgagacgtatgtactaaatgttaaatctagtctga
attaggatcctaacctaagaatgctgtaagaataattttaggatgatttt
cccaaaaaagttacgaatatccatgatgaaattgatttacaccactcttt
ctccctggatttctccacttacccttgatccttctcttagttgctgagca
tcaagcagagaggcatcaagtaccattttgggaatcttTGGTATGACCCG
GCTGGGGGTTGACCCCACAACCTTGCGaaccgtagccggatgctctacca
ctgtactacggtcgcttgTATATAAAATCACCGCATGACCTCAAATAATT
AAACAATCGTTTAATTTGTTATGTTTGATGTTTAATTGTTAATAATTATG
CTGTTGTTCGATCCAGATTGATGCTATGATGTGATGaaattcatttgttt
ttttaacaGTTTTGACGGAGGTGTGTTTGTGGGAGAAAAATGGAGGATAG
ATATTCTAACAACGATGGCTGGAATAGTTGATGGTTATTGTATATCCTCT
TTGtgtatttttttgtgtttagTGTACAGCTTCGGTTACCATTGTAATTT
CTTCCAATCAAAAATATGGCTTACCTTTTCCAATACCTCTTGCGCCCATT
CCAGAAGAAGGGATGAGTTACGTCACGCTCATTTTGGACTGGATACCGCC
ATAAGGGACCCTGTCCAGTTTCAGCTGGCGTTAATTTTCCTTCTTTTCCA
AGCCGAGTAATATTTTCTTTAGAAAGTCTGCcaaaatgtttcttttattt
tcagcataattgtttctattgtttttttgaCATAAATTTAGTCCCTCCCA
CAGTTCTTATATAGAATAATGGCAGACAGAAATCAATTTGTTCGTACAGC
GTAGGGATACGTGATTTGCTAGCAAGATGgaaaacaaatacaataatcAA
AAACCCATCAAAAAGAAACTATTTGTGCAATTGGTTTCAACAATGAGTTC
CTGTACTAATATCTTTTAAAGTCATTTAGGAAATGTTATCTCTGATATAT
TGCTTCCGAATGGTCCAAACAAATCAAATTTTACTATTTAAGGCAAAAAA
TAGTATAATACACTGATTTGCTTTTTTTGGGATTGCACTTTTAGGATAAA
GGTTTCTTTCCAGTAAAATTAGGTCGATAACGTTCGGTTGttataattgt
ttttaataTACTGGCTATTTTTGTTGGTccttttaaaggtttttcttttg
ccatgagtgttcccgtttcataacCATAGACCTTTTTGAATTGCTCTTAT
TTTCTCATTCATTGTGTTTTTTGAGCCTCACTcacattttaagaacaatt
tgattTTTGTACAAAGCGAAAAAGTCAGTTGTTATGTGCTTGCACTGCAT
TCCGTAGCCTTTTAAGACACAGacttaaagattttgttttgattgaaagt
tttgatgatgctgatgtagtaaaaccaagtgcgacaagattagaaaaagg
ttttgaaaaaatgaaactaCATTGAGtaaaaaaacattcctcaaacaaag
cccgggggggggcactccagtgatctaccgtacgtgcggcccttaagggt
aggttttttggactttggaaagtgcactgtaagggttgatttgtgagcaa
gtgggaataagtgcactgtaagggttgatttgtgagcaagtgggaataag
tgcactgtaagggttgatttgtgagcaagtgggaataagtgcactgtaag
ggttgatttgtgagcaagtgggaataagtgcactgtaagggtgtaaaatt
tgagaaaataccaaattttgaggtaaaatttgagaaatttcaaaatattt
tgccctgaaaagggcactataagggtcgatttcagccaaatttttcctgc
accgTAAGGGttcgattttagagacctgatttttggccgagcgtacggtc
gttttcaaaatcgagtgccccccccctggaaagggacttactgatactct
ttcgaatgtttttatgtttatgataaatagaacgttttctatcttataat
caaaacGATTATAAATTTGttcgaaatcaactttgctatttttggaccta
ccttaaggtagtcctttaaattaacccttgtccgttcgtccgttcgtccg
tccgtccgttcgttcgtctgttgccagcttttctcgggatcggctcatta
gttttttctaattttttgcacaatgatgcaaaatgacaatacccaaaatg
tgacggagcccgattttcgaaaaaaaaaattttccggccaaaaatggcgg
aagtatgccggaaaaactggtttttcggcattttctcgagatttcatcat
tagttttttctgattttttgctcaaagatgcgtattaacaatacccaaaa
catggcctagtctgttttttgagaaaaaattttttccggccgaaaatgcc
ggaaatatgccggaaatcgccgtttttttggattttcattggactttttc
catataattggttgttttttcattcaaaaacattattaatagcaatgccc
accatcaagcatgtttcaattttcaataaaattgatttttgaagccggaa
ctttctaaaaattgccggaatagccgattttcgccggaaaaacagtattt
cttgaatttcttgagccctactttatattttttcatgacattttgcacac
tgatgcaaaatgtcaatacctaaattgtgacggagcccggtttttgaaaa
aaattcatttccggccgaaaatgccggaaatatgccggaaacactggttt
ttcggcattttctcgagattccatcattagttttttctgattttttgctc
aaagatgcgtattaacaatgctcaaaacatggccgagtccgatttttgag
aaaaacattttccagcggaaaatgccggaaatatgccggaaatcgccgtt
tttctagattttcatttgactttttccttacaattggttgttttttcatt
caaaaacattattaatagcaacgcccaccatcaagcatgtttcaattttc
aaaaaaatcgattttgcttcccttccctcttcccccatcaacaatcaatg
agaaaatttaatgttttatgcattttcgcaaaacgctatatcgtctgact
gattcttttaatttttctccttattgccttattatctagctttcatcatc
agtaggtaggtccattcagcatgttgcttgttttgtttacaaaagcaata
gaatgtgaggtcatagctttaatttatctgactcagcatgaagacacggc
ctaaaataagctccttttattcccgTAGAAAACCTTTAAGACATTTTGGA
GATACTTGATGCCTTAGTGCAAGATATTTGGCATCAACCTCTATATTGGA
GTTGCTAAATTTCTTAATGTCTTGATGCCCGTTTCGCTGGAAAAAAAGTG
GCGCGTCCTTAGTCTGTGTAGCCTTGCACGATCATCACAGACTGATAAGA
TTTGCACACAATTTATTAAAATCCATGCAATCCACGCAGTTTAACAACGT
AGACAAGCTCTTTTTGCATATGTCTCGGTGACGCGGTGGAAAAAACTTTT
ATCCATAGGACTTCCAATTTGGTCGACTAAAAATATAACGCCAATGACCT
TgctccaatattttttttaatttgacctAGTCGGTGTATTAAACATAAAT
CAacacattttattttgagaCTAAAGGAATTTGATGTACCTGAAAATAGC
TACATGTTTagatattctttttttaaagggtATCAGATTTGTAGATAGGT
AACTAACACTTTCTTTAACTATACCCCAACTCATTGCGGTTTTTGATACG
TTCACAACGGCTTTTTATTGATGTCATTGTTTAAAGTAAGatcgaaatat
aaaaaaatggtatacataaaatgaaaaattcggAAAATGATACCTCATCG
TAAACATGACATCATTTAGTGTGACCTAGctctttccattttttttcgTC
AAGAGTATCAATCCACATGAACTTGAATGCATACGGCGTTTACgaagaag
ttttttctttcacgGATCTGTCTTGGACACAGCAGAACCGTTATAATCTT
CTGACTACTTGACCTATAAAAGTacaaacccggggggggggggggNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGGGGGAGTAA
TAGGGTTAGAGAATGTGGATATGTGCGGACCAGGCCTCCGGAAAAAGACC
CTTGAGACAATTTTATTTTAGTGAGATAATATCCTAATCTTGGAGAGATc
cttttgatattttcaaaaattggagaAATCCCGGCGCTTAAAGAGACTAT
TTGAGACTTATGTACCGTCCACcgtttttttgttcattttgtgaaaaagt
cacCTTTAGAGAGACAATTTTATTTTAGTGAGATAATATCCTAATCTTGG
AGAGATccttttgatattttcaaaaatgggAGAAatcccgacccttagag
agactatttgAGACTTACTTAAGGACGGTacaccgttttttttttttttt
tgaaaaagtataaATAGCTTTCTAATGGAACCAAAACCCTTGTCTAGCCC
TTCCATTGTCCCTTCAGTTGGACATCAgtgtaaaatactctctataattc
gaatattcCTCTgaggggccattcaaaaagtacgttcgtcgccgaggggg
ggggagggggtcagcaAAAAAGCGAACGAAAACGAACGGGGGGAGGGNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGGGGGGTACTTCAAAACGAACGCTGACg
aacaaggggggagggggggtctgaaaatagggaaatttggacgaacgtac
tttttgaatggcccctaatccaaagaaaaaaatatagtCCCATGAAGATA
GAATTAGAGAGAGACAACTGTGTATAATGGAGTAAAGGCCCTAATAATTC
TTACTGTAAGGAACTCCATCCTCtgaatgggctattccagaaatagtctg
tacccctatgttgaggaggtgtgacgtccagggtggtctggaaaataaaa
aatccaatggTCTGGTTatttgaatgataaaatccggggtggtcagtata
acgaggtcgaaaatccaaggtggtccaaagaaatgagagaaaaaaaaaac
caacatagggggtacaaattttttctccGAATAGCCCAATCGTTTAtata
caccctcttctcacagacccactgggtcCCCTTCCCACTGGccaaaattt
ggccaaaatatcgtctccagtggaaaattatcctccaatttttgtcccca
ttgaaaataaccAAACAAACCAAACCTCACTGCAAAACATTATGCTAGct
ttcccactgaattttctgacttgaaaataaaagaaattaaatccccagcc
ataaagaatatgggaatatcaatccccatcgagtttcattccgttatttt
tacccccactggctgaataaatcctaccgggtctgtgagaagcgGGTGTT
CATTTGGTATTGAAACTTTGGAAACGTTCAGATACAAATTCCCTATGACC
TAGATTTATCCTGTTCTTCTTTAGTAAAAAGTTTTGGAGAcgaatttttt
gatgataggGTCGAATACAAATTCCCTATGACCTAGATTTATACCGTTCT
TTTTTAGTAGAAAGTTTTAGAGACGAACACTCTTATAGAAGGTGATGGAT
GATAAACGATACTTCTTATATCAAAAAATTGTCGAGACACTATACAGTTT
CTAAAACGAGTGCGATAAGTGGCTTCACGAATCATATTTCGTGAACTTTT
TTTATAGATATTTTTAATGAAGTGTATGATATGTACGAACGTATATAAAA
GGAGacttttttgtacaaagatatcatttctaaaaatctttcACTCAAGA
AGGATAGCATGGACTCGCATGGACTACTTGATGATTATACGTAACAGTTC
TCTTTTATTTGGCACACGATGTTGTTTTGACGGTGTGTGGACCGGGGGAA
GGGTTACTTAGACAAAACAGGTGCCAGGTATGTGTGGGCCATAAGGTTCC
CTTTTTCTAGGGGTgcaaaaatcgttaaaaagtAATTCAGGGTCATGAAT
TCTTGAATTTtcgactaaaatttgaaatttttgctgaaattttgtgGAAT
TAGTCTCTATAAGGGTATAATTTCTTTAAAGTCGCTGCAAAAGAAGATGG
GAAGGGATTGTTGGCCGCATTCAATCCGAAATCTGTAGTTATGGTTAGCT
CTTAGTGAAGGTTGATAGTAGCTAAGCAAAGTCGATACTTGCTAATGCTT
CTTGCTTTGCAGGAATCTTAGAGACTGTTCAActaacgtttccagaccat
CTTTAAAAGAAGACAAAActatgaaaaacaacaaaatgaacGACAAGAGA
CGACATAGCTGGAAACACAAGATGTCGTAGCTTGCTTAGCCAGGTAGACA
GGAGTTTGtcctttaaagcttaaaaatattttaaagttgtGTAAGCAGAG
TGCACGGTTTGGTTTATTGAGCGTGCATATCGTAAGTAAGTTAAGTAACT
TTAAAACTTCTTCAGTTGCATAAGGTTTCATATTAAGACTGCGAGATAAA
CTACTCTTTTCTTTTTAgaatcaaaaaatgttttctttaaaagcatttca
ttgttattttctttGAGATTATTACGTTTTATTCGTAATTTATTCCGTTG
TATTAGTCGAAGCATAGGTAGGGGCAAGGTCTAAAATTAATTGTCTCCAA
TAATCGTAACCCTAAAATTGGAATCTTATACGATAAGGACTTCAGTTTTG
AATGTaaataactatgttttcattttttaaagttgaGTGCTAATGGAAGA
AAAGTTGGTTGTTAATAAAACGAGATAATGATCAGGGATTAAAAATGGAA
ATGCAACCTACACGTAATTCTAATAAATTGTCCCCCATTCTGTTCGTTTT
GAAGAAGTCTTTGGTATTagtataaaagaaaaagttgtTTAGGTCAATCA
ATACATAGTTTATTAAAGAGAGAGTCTACTTGAAGGTCCCATGGCAGCAG
CGAATTTGAACCTGTCACGAActgggattgaaccagggaccttcagatct
tcagtatGAGAGACGAAACAAAGTTAATTTCACAAGTAATCGTCAATACA
GAGTTTGTTTGAGAATGGTCTACTTGAAGATTCATGGGTGgccttaaaaa
ctttttttaacactagattttagattttatagaaattttaatgtaagcat
gttttttttttatttctggaGGTTTAGGGGGATGTTCGTCGTTCATTTag
tgctacacgtttttttcataagaacaaactatatagaaCAAACTataggc
tttgatggccaaaatgttaagaacaagttaataacattttaaggctttgt
gaacTCTAAAACggtcaatttcttaagaaaatagacaaaaatactcacaa
aatggtgaaaataagaacatgttaagaacatttttaggcttaaaactcaa
aaagttaagaacatcatccaaaggcttccaaaattttgcatgttcttaca
aaaaaaaacgtgtataagatTTTTCTAATATAAGTATTGTCTTTTTGGAA
TTTCGCATCTTGTACTATTTTTGgtgtttgatttttaaaattctatCTGC
TAATTTTGTCATCCTCGATTGGAATTTTCAAGGAATGCATTTGAAACTTA
AGAAatcaatacactttttttatattagAATGTCAAAATGTTTAGAAGCT
TGCTTTCGATCTTTCcttaaaaatgttgtttcagcatttttgtgagaata
cttttgtttttaattttctaagTAACTTTTGGTCTCGAAATCCTGACTTA
TAAAGATAGTGAAATACAATAATGCCCTGCAATGCCCAACAGTCCCTGGt
tttaatagtttttttttaaacctttattataaaggtataaaatgatattc
atgacgtaatgttttcggAAAGACCCCGTTTTTTTtgacagtacacgttt
ttttttttataaggaacacgtttataaggaagtcgaggctgaaaatggtt
caaaaaataaggaattgttaaggaactgctcaggctgagaataagtggat
ttgaaaataatgtaccttatttggacttatttgaccaaattttgatcttt
caaggagcaaaaagttcaaaatttcctatgtagtaaggaactcgataatg
aactttgagactgaaattctctgtaaaaataaggaactccaggctcagag
caaagttaaggttccttataaaaaaaaaacgtgtagtggcaaattttata
caatttttGTCTAGTATAAATTTGCTACTACAGGCTAAAACTGGGGTATt
accgtagaaaacattacgtaatgaatatcatgaaaTTAGACTTGACTTCA
CAGGTTTTAAGCCCTTTTAATAGCTATTAAGACTTCAATAAACTGGTTGT
ACCTCTTTAATGACCCCCTATTACGATAATATTCATTTTAAAAGGTAGAC
CCTTTGAAAAAGGAGGTCTTTTGTAATCACATATTTTCTATATAGAGATT
GACTCGACAAATATTTAGATAATCGTGTTTCAATATTAGTTTGTACATTT
TGAGTCAACAATGTTTCTACTACTGtttctgtttttttgtttgacgatgt
ttagtttttttttaacatatATTCCATATtggaaatctttaaagaaagaa
ttttataagaattgtCTCCcgttttttaaaataaaagtttgGATTTTAGT
TTAGGTTTAGGACAATgacttaaaaaatttgaaaattaacttTATTCTCT
AAATCAAAGCTTCGACCTATCGTACACAAACACTCAAATTTCGACCTTAA
ACAGATTTTTGCTCGATTTTGTCTCCTGAAGACTCAAAGTGGGATAATat
tgctaggaatttgagaaaaaaatctcatttgcttattAGTGGGGAAGCCG
GGCCTGCCACTTTCTTGATTCCACTTCTTTTGCTGCACTCTGTttgattt
tcagaaatttgaatAGATTTAAATCGTTTAGGACTTCATCACCTCATTTC
TTTGCAATTCGAAATACAGTAGAGCGTCAATTGCACTGTTATAATTTTTA
CAGGTGAAAAATGTCCagaaacacaagaaaaaaaaaactagttTTAATTG
TCCACATAAAGCAGCCTTTGTCGAATAGAATTTACTTAAGACTTAGACTA
AGCTCgagttttttaaatcaatcattCCGTTTTTAAACTGTGCTCTTAGA
AACAGAAAAATGTTGGAAGGAGGTCCTATGTTTGAActtctataagaaca
taagctGATGTTAGAACATCTTAGAGAATACATAATATTGAGAATAAGTT
AAGACTCTGAAGGGGGAAAATTCAAATATGGAATTTTCTTGACAATACAG
ATTCCGGTTTCAACAATTTGTCTGGAGCTTTCAATATCCGAACGTTAAAT
GACTGTAGcttcttataatgttcttaaaaaaattacagaCAAATTCCTGG
GCTTGAACTTTGTTATATATTATTGATTTactgttttgatattttgagtt
tgaccgactATAAACTGTTAACTTTGTTAATCTAACAGTTATACGTTCAT
ATCATATTATTGTTATATATAACCTGATAATCATAATCCCCTTCTTTCTT
TCATTCACCAGTGTACAAAACGTTTAAAATCAATAATAAAATTAACAGTA
CAAGACAACTATATCTTGTTGAATAAATCAAATAATAGAAACAATAGAAC
CAGCAcacacaaaaaaatcataacaaataGCCAACAGTGGaattgaacaa
aatttttttttcaacaaagcTATGAAAACATCGTTTCTACCTTCATATCT
CAGGAAAGCGCTCATCAACTATGGTGGCTCCATTTTCCATTCTACTAAAG
GACAGTCAATCTCAACGTTGAATGAAGAAGACGAAAATCTAACCACAGAA
GAGTCGTCACGAGATATGTTTGCTGAATGTCACAATTTAAGGAAGGTCCC
TATGGTCAGTGGACCATGTACACCTCGGCCCCGAAGTGGCCACCGCATGT
GTGCCGATGATAATTGTATATACATTTTTGGTGGTTTTAATCCAGCTTTT
AAGACTTTTAACGAGTTATGGAGGTTTAATACGACAACCGAAAAATGGAG
TCTGCTGCCTGACGATGACGGGTTGGCTCCCAAGTCCTGCGCCTCTTCTT
CTATGGTCATGTTAGGTAGTAACCTATTCGTGTTTGGTGGGACTGGCTAC
CCGTTCGCCAAGACCAACTCTAACGAACTTTTTATGTAcagtttgaaaat
gaaacgtTGGTTCAACTTAACAGACACTTCAAGTTTAGCCAATCGACAGG
ATTTCGCCAAACACCCGAAagactttataaaaacaaagcagTGCGGATGT
CAGAAGTTTTATGATAGGCAACCAGTTCCGAAATACGGGCAGGGTATGGC
TACTGCACATCAGAAAATCTATATCCACTCTGGAACTCAAGGCGAGGAAT
TTACAAAGGAACTTCatagtttttctttaaagacATTTCGTTGGACAGAG
tatgaattttgttttgagcatACGCGAAATGCGCCTCAGCCTCGATACCG
ACATGAACTAGCCTCGATTGATAACCGCCTGTACGTCCTTGGTGGTGCAT
TACTCAACGAGACATTTAATTTCGATCAACTCACGTCATTCAATCTTCAA
ACTCGAAAATGGGAGCAAGAGGCATGTCAATCAAACAAAGGTAGTAGCCC
GACCACACCTGGAGAGAGCAGACAGCTACCTGTAGGACGTAAAGCTCATA
CCTGTGTATCATACAAGAATAAGATCTACATGTGTGGTGGTTACAATGCA
GTAGAAGGAATGTTGGATGATTTTTGGTCGTTTAATGTCAACACCAAAGA
ATGGAAGCAACACAAGAACGTAAGTGTCTCTAttagattttaaggcttca
tttcttcttccatctttctacacgttttttatgagaacaatgacttggat
ggccaaaatatcaagaaaaaattGAGAACGATTTTAAAGGCTTGGTCGAC
TCTGAAAACCTCCGATTACAaaagaaaatggataaaaatactcacaaaaa
ggtgcaaataagaacatgttaagaacatttttaggccttAAGCTAGAAAA
GTTAAGGACGTCCAAAGGCTTCAATTTAAGAAGCAAAATCTTTCATATTT
TGAACCTTAAAGCATCATCACGGCAGTCTCTGTATTTGGACATTTTGATC
TCTTAAATTATATCTTACTATTCTCTTCTGATCTTTTTCTAGCGTACATT
TCCGTACCCGGTACAATTCCACTCGTCCGCAGTCACTTCATACGGTTGCA
TGTACATTCACGGTGGTTTGACAACCAAAGGAAACAGAGTCAGTGACCTA
CATCAGTTGTGGCTTCAAGTACCAACACTTACGCGTATGGCCTGGATGAA
GGTCGTTCAACAGTTAAGAGACAATAACCAACTGACTAAAGAGACCTTGA
TCAAATTGAAGATTCCCAGACACTTCATTGGTTTCATTGATGATAAGATT
GACGTCATAGCTGCTTGATTTGAGGATTCCCTGggatttttgatttccaa
actCAGGATGGAAATAGCGTTATAGTTGACAGGAGATCTTTACATATTAA
ATGAGATGTCACTAGGTATAATCAAATTTTCTAATCAGAGACTTAATTAA
AGAACTTCATCTCATTAACTTGCCATTAAGGAGGATTTTCTATTTCGTGG
TCTTATGATTTCAATAACAACCCATTAATGTGCGAGTTTGATATGTCAAT
TGGACAACGTTGTTTTTCTCTTATCTTTGATGAGATGATATTTCTTTTGT
ATATAATTCACTTAATTGGATTATCATTTGTGATTCTCTGCCTGTTTAAG
TGATCCTTTCACCCTGGGAACGCTTTTCAAGATACCACATTACAATCGCC
TTTATAACAATAGTTATAATGACTAGGTAGTAGGACCATTTCGAATTAAC
CGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00046655-exon-scaffold_116-1491911889:495564..495659 | TCONS_00046655-exon-scaffold_116-1491911889:495564..495659 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1510915933:495564..495659 | TCONS_00046655-exon-scaffold_116-1510915933:495564..495659 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1575043694:495564..495659 | TCONS_00046655-exon-scaffold_116-1575043694:495564..495659 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1491911889:498873..498977 | TCONS_00046655-exon-scaffold_116-1491911889:498873..498977 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1510915933:498873..498977 | TCONS_00046655-exon-scaffold_116-1510915933:498873..498977 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1575043694:498873..498977 | TCONS_00046655-exon-scaffold_116-1575043694:498873..498977 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1491911889:511267..512332 | TCONS_00046655-exon-scaffold_116-1491911889:511267..512332 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1510915933:511267..512332 | TCONS_00046655-exon-scaffold_116-1510915933:511267..512332 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1575043694:511267..512332 | TCONS_00046655-exon-scaffold_116-1575043694:511267..512332 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1491911889:512706..513416 | TCONS_00046655-exon-scaffold_116-1491911889:512706..513416 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1510915933:512706..513416 | TCONS_00046655-exon-scaffold_116-1510915933:512706..513416 | Clytia hemisphaerica | exon |
| TCONS_00046655-exon-scaffold_116-1575043694:512706..513416 | TCONS_00046655-exon-scaffold_116-1575043694:512706..513416 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_116 | supercontig | scaffold_116:495564..513416 + |
Blast
BLAST of TCONS_00046655 vs. Swiss-Prot (Human)
Match: KLD10 (Kelch domain-containing protein 10 OS=Homo sapiens GN=KLHDC10 PE=1 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 1.058e-71 Identity = 138/414 (33.33%), Postives = 213/414 (51.45%), Query Frame = 2
Query: 308 RDMFAECHNLRKVP--MVSGPCTPRPRSGHRMCADDNCIYIFGGFNPAFK-----------TFNELWRFNTTTEKWSLLPDDDGLAPKSCASSSMVMLGSNLFVFGGTGYPFAKTNSNELFMYSLKMKRWFNLTDTSSLANRQDFAKHPKDFIKTKQCGCQKFYDRQPVPKYGQGMATAHQKIYIHSGTQGEEFTKELHSFSLKTFRWTEYEFCFEHTRNAPQPRYRHELASIDNRLYVLGGALLNETFNFDQLTSFNLQTRKWEQEACQSNKGSSPTTPGESRQLPVGRKAHTCVSYKNKIYMCGGYNAVEGMLDDFWSFNVNTKEWKQHKNRTFPYPVQFHSSAVTSYGCMYIHGGLTT--KGNRVSDLHQLWLQVPTLTRMAWMKVVQQLRDNNQLTKETLIKLKIPRHFI 1504
R F + + ++P + G P RSGHR AD+ +Y+FGG+NP + F ELWR++ T W + DG P+ AS S+V+ G+NL VFGGTG PF ++N N++ + ++K KRW L+ C+ ++P YGQ MA + +Y+ GT G ++ +LH L T WT+ + + + P+ RYRHE+A R+Y+LGG ++ +++ ++NL+T WE+ A T P E P R+ H+CV KN +++CGGYN E +L D W N+ T +W + T P PV FH +AVT GCMYIHGG+ + R L ++WL VP+L +AW K++ + L++ L+ L + + I
Sbjct: 66 RRRFIQSCPIIRIPNRFLRGHRPPPARSGHRCVADNTNLYVFGGYNPDYDESGGPDNEDYPLFRELWRYHFATGVWHQM-GTDGYMPRELASMSLVLHGNNLLVFGGTGIPFGESNGNDVHVCNVKYKRWALLS-------------------------CR---GKKPSRIYGQAMAIINGSLYVFGGTTGYIYSTDLHKLDLNTREWTQLK-PNNLSCDLPEERYRHEIAHDGQRIYILGGGTSWTAYSLNKIHAYNLETNAWEEIA---------TKPHEKIGFPAARRCHSCVQIKNDVFICGGYNG-EVILGDIWKLNLQTFQWVKLP-ATMPEPVYFHCAAVTPAGCMYIHGGVVNIHENKRTGSLFKIWLVVPSLLELAWEKLLAAFPNLANLSRTQLLHLGLTQGLI 438
The following BLAST results are available for this feature:
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