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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00045098 ID=TCONS_00045098|Name=TCONS_00045098|organism=Clytia hemisphaerica|type=transcript|length=1118bp
CAGTATGATGGTAAAACCCATTATCTCAAAAAGCACAAAATATATTTAGT
TGATAAGAGAATATTTTGGCGTCATGATGTgattaaaattattttgggca
tgATGCCCTAATCAGGGACTTTACTACGcactctttgtttttttctaaat
atcATTAGAAATAATGTGAAAATTTATGAACACCAGGAAAATGTTCTGTA
AATcacaagaaaaatcagaaaaaatttagCTGTGGACAAATGAGCACTTT
GATTTTAACAAAGTAGTATAGTTTAATGTCAAGGATGATtatgaaaaatc
cctaggaaagaAATTAGTTTAAACCTTTCGGTTTTATCTGCATAAATTAA
TAGATAGCGCAGTATTCTATTGAGAGTTGACTAAATCTCCTCCCTTGCCT
CCACCCTAATCATCAGTGAAACGAGATAAGTTAGAAATGACAAATCACTA
TAAAGtcttcaaaaacatttttgaagccacATTTAAACGTCAGGTAGTTC
AAAGAGATGGCGCtatggtatagtggtcattgaccttgatTTCCActtgc
agcggttcacttggcttaagtgaatgaaccttcacccgggtcaacccatg
ccatgtgaggggaatggTTAGctagttcaaggtgctgacggggcacTAAT
TAAAAGCgcctatagttgcgaaaatgggcctccaagcctcctgcgactca
accaaatagaaatagaaaaatagaGATGGAGTTAGGATTTTTGTCTATGC
CTACATTTTAGCAATAATTCATTATGATCTCTTGTTCAGTAAGTTCAGTA
ATATCGTACTGATAAATCCCATACATAGTAGTGTTTCATGGACGCTGTAG
GTATGTTCTCACTTTACCTAGTATAAGCTTGTCTTCTCCAATTTTGAATT
GAAGATGATACCGTAACTTTGTGTAATGCTGATataccttgtctaattct
gTCATAGGAACTACCGttaagttgggtaacttgcatcagtggaggctaac
atgcataggcCTCAAAtgatgaatgacctggctggtcattacaataaata
aaatcaaaacaaacttgatttgcaaaatttgcaggtatataataaaatgt
ATACCTCCTAAGCAGTTt Run BLAST on NCBI transcript from alignment at sc0006904:102..1219 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00045098 ID=TCONS_00045098|Name=TCONS_00045098|organism=Clytia hemisphaerica|type=transcript|length=1118bp|location=Sequence derived from alignment at sc0006904:102..1219 (Clytia hemisphaerica)
aAACTGCTTAGGAGGTATacattttattatatacctgcaaattttgcaaa
tcaagtttgttttgattttatttattgtaatgaccagccaggtcattcat
caTTTGAGgcctatgcatgttagcctccactgatgcaagttacccaactt
aaCGGTAGTTCCTATGAcagaattagacaaggtatATCAGCATTACACAA
AGTTACGGTATCATCTTCAATTCAAAATTGGAGAAGACAAGCTTATACTA
GGTAAAGTGAGAACATACCTACAGCGTCCATGAAACACTACTATGTATGG
GATTTATCAGTACGATATTACTGAACTTACTGAACAAGAGATCATAATGA
ATTATTGCTAAAATGTAGGCATAGACAAAAATCCTAACTCCATCtctatt
tttctatttctatttggttgagtcgcaggaggcttggaggcccattttcg
caactataggcGCTTTTAATTAgtgccccgtcagcaccttgaactagCTA
Accattcccctcacatggcatgggttgacccgggtgaaggttcattcact
taagccaagtgaaccgctgcaagTGGAAatcaaggtcaatgaccactata
ccataGCGCCATCTCTTTGAACTACCTGACGTTTAAATgtggcttcaaaa
atgtttttgaagaCTTTATAGTGATTTGTCATTTCTAACTTATCTCGTTT
CACTGATGATTAGGGTGGAGGCAAGGGAGGAGATTTAGTCAACTCTCAAT
AGAATACTGCGCTATCTATTAATTTATGCAGATAAAACCGAAAGGTTTAA
ACTAATTtctttcctagggatttttcataATCATCCTTGACATTAAACTA
TACTACTTTGTTAAAATCAAAGTGCTCATTTGTCCACAGctaaatttttt
ctgatttttcttgtgATTTACAGAACATTTTCCTGGTGTTCATAAATTTT
CACATTATTTCTAATgatatttagaaaaaaacaaagagtgCGTAGTAAAG
TCCCTGATTAGGGCATcatgcccaaaataattttaatcACATCATGACGC
CAAAATATTCTCTTATCAACTAAATATATTTTGTGCTTTTTGAGATAATG
GGTTTTACCATCATACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00045098-exon-sc0006904-1491911889:102..1219 | TCONS_00045098-exon-sc0006904-1491911889:102..1219 | Clytia hemisphaerica | exon |
| TCONS_00045098-exon-sc0006904-1510915933:102..1219 | TCONS_00045098-exon-sc0006904-1510915933:102..1219 | Clytia hemisphaerica | exon |
| TCONS_00045098-exon-sc0006904-1575043694:102..1219 | TCONS_00045098-exon-sc0006904-1575043694:102..1219 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006904 | supercontig | sc0006904:102..1219 . |
Blast
The following BLAST results are available for this feature:
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