TCONS_00004455 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004455
Unique NameTCONS_00004455
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length383

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004455 ID=TCONS_00004455|Name=TCONS_00004455|organism=Clytia hemisphaerica|type=transcript|length=383bp
TCCACTTTTTTCAATTGATATGAGTTCTGGGGTTATACGTTTGTGTGTTT
TTACAATACCTTGCATCTGTGGTACATCACATCACATCCTGTCTGTAGAA
CTGGCGCTTAAACCCTTTAGATAGATCTCCTATTTGACGATGGATTAGGT
TAAAAGGTTTGATTACCAGGTCAAACtaagaggcccccagcggaccAAAA
Atacacgcattcacgcaagtttttctcaaattcatgcaaacccgattttt
tgggaaatcggggaaattttcgggaaaaatcagggaaattgTCAAAGATA
GGGGAAATTTGCACAAATTTGGGTaagaaggaaaaattcacgcgttcacg
caaaaaacagggcagattcacgcattcacgcaa
Run BLAST on NCBI

transcript from alignment at sc0000044:407319..407701

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004455 ID=TCONS_00004455|Name=TCONS_00004455|organism=Clytia hemisphaerica|type=transcript|length=383bp|location=Sequence derived from alignment at sc0000044:407319..407701 (Clytia hemisphaerica)
ttgcgtgaatgcgtgaatctgccctgttttttgcgtgaacgcgtgaattt
ttccttcttACCCAAATTTGTGCAAATTTCCCCTATCTTTGAcaatttcc
ctgatttttcccgaaaatttccccgatttcccaaaaaatcgggtttgcat
gaatttgagaaaaacttgcgtgaatgcgtgtaTTTTTggtccgctggggg
cctcttaGTTTGACCTGGTAATCAAACCTTTTAACCTAATCCATCGTCAA
ATAGGAGATCTATCTAAAGGGTTTAAGCGCCAGTTCTACAGACAGGATGT
GATGTGATGTACCACAGATGCAAGGTATTGTAAAAACACACAAACGTATA
ACCCCAGAACTCATATCAATTGAAAAAAGTGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002502XLOC_002502Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004455-exon-sc0000044-1491911889:407319..407701TCONS_00004455-exon-sc0000044-1491911889:407319..407701Clytia hemisphaericaexon
TCONS_00004455-exon-sc0000044-1510915933:407319..407701TCONS_00004455-exon-sc0000044-1510915933:407319..407701Clytia hemisphaericaexon
TCONS_00004455-exon-sc0000044-1575043694:407319..407701TCONS_00004455-exon-sc0000044-1575043694:407319..407701Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:407319..407701 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.62989	1.60341	1.38557	0.764132	0	2.11451	3.54599	3.07771	2.45927	2.8067	4.51876	3.46159	1.10038	2.24123	2.73544	2.54155	1.27586	1.62449	0.985461	3.09262	1.50418	1.14981	0.707747	0	1.64121	1.37438	0.314064	2.22296	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00004455 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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