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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044833 ID=TCONS_00044833|Name=TCONS_00044833|organism=Clytia hemisphaerica|type=transcript|length=734bp
GCCCAGCCTAACCCCAGACCCGGCCACGGAGGAGGTCAAGGACACACCCC
GCAATGACGGGAAGCCAGCCCAGCCCTCCCACAGACCCTGTGGTGGAGGA
GGTCTCTGAGGACACGCCCCGCGCCCACGGGGAGCCAGCCCAGTCTACCC
ACAGACCCGGCCACGGAGGAGGTCAAGGACACACCCCGCAATGACGGGAA
GCCAGCCCAGCCCTCCCACAGAACCTGCCACGGAGGAGGTCTCTGAGGAC
ACACCCCGCAATGACGGGGAGCCAGCCCAGCCTACCCCCAGACCCGGCCA
CGGAGGAGGTCTCTGAGGACACGCCCCGCGCCCACGGGGAGCCAGCCCAG
TCTACCCACAGACCCGGCCACGGAGGAGGTCTCTGAGGACACGCCCCGCG
CCCACGGGGAGCCAGCCCAGTCTACCCACAGACCCGGCCACGGAGGAGGT
CTCTGAGGACACCCCCCGCAATGACGGGCCAGCCCAGCCTACCCACAGTC
CCGGCCACGGAGGAGGTCACTGAGGACACACCCCGCAATGACGGGAAGCC
AGCCCAGCCCTCCCACAGAACCTGCCACGGAGGAGGTCTCTGAGGACACA
CCCCGCAATGACGGGGAGCCAGCCCAGCCTACCCACAGACCCGGCCACGG
AGGAGNATGCTCTACTTGTGATAAGGACTCGATAAAAACATACACACCCT
AGGCACAATATAGTAACTAACAAAAAGAACATAt Run BLAST on NCBI transcript from alignment at sc0006290:422..1956+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044833 ID=TCONS_00044833|Name=TCONS_00044833|organism=Clytia hemisphaerica|type=transcript|length=1535bp|location=Sequence derived from alignment at sc0006290:422..1956+ (Clytia hemisphaerica)
GCCCAGCCTAACCCCAGACCCGGCCACGGAGGAGGTCAAGGACACACCCC
GCAATGACGGGAAGCCAGCCCAGCCCTCCCACAGACCCTGTGGTGGAGGA
GGTCTCTGAGGACACGCCCCGCGCCCACGGGGAGCCAGCCCAGTCTACCC
ACAGACCCGGCCACGGAGGAGGTCAAGGACACACCCCGCAATGACGGGAA
GCCAGCCCAGCCCTCCCACAGAACCTGCCACGGAGGAGGTCTCTGAGGAC
ACACCCCGCAATGACGGGGAGCCAGCCCAGCCTACCCCCAGACCCGGCCA
CGGAGGAGGTCTCTGAGGACACGCCCCGCGCCCACGGGGAGCCAGCCCAG
TCTACCCACAGACCCGGCCACGGAGGAGGTCTCTGAGGACACGCCCCGCG
CCCACGGGGAGCCAGCCCAGTCTACCCACAGACCCGGCCACGGAGGAGGT
CTCTGAGGACACCCCCCGCAATGACGGGCCAGCCCAGCCTACCCACAGTC
CCGGCCACGGAGGAGGTCAAGGACACACCCCGCAATGACGGGCCctttat
tgaaaggaaaagcGAAATAATTTGGATCCCCAAAGCTGCATAATGCTATC
AATTCTAGCCATTGgtaacttcaaaaaaaaacaaacttgttatTGGTCGT
ACCTCCTTTACAGTCAACTCTATCCTGGCCCTTTCTACTACATGTTAGCC
AGTTGTGGGATGCCAAATATAATTCCTTGATAACTTGAGAATTCTTGCCC
TCGTCTAAGTCTTGACCAGCTATCTGTACAACTGATGCTCTACTTGTGAT
AATGACTCGATAAAAACATACACACCCTAGGAACCATATATAGGAACAAA
AAGAACAtataatagaaaataaaatattatcttataaattaatttgattt
tataCTTAAATCTATCGAAAACGATATGAAATACTTAAACTTATATATAA
AATTGACGTGAATCAAGAAATCATTCTTGCGTCATGATTTATTACTGTTT
AACTAGGCCCATACCCCTCTCTAGGGAAACAATATATGTAAACTNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCCTACCCACAGA
CCCGGCCACGGAGGAGGTCACTGAGGACACACCCCGCAATGACGGGAAGC
CAGCCCAGCCCTCCCACAGAACCTGCCACGGAGGAGGTCTCTGAGGACAC
ACCCCGCAATGACGGGGAGCCAGCCCAGCCTACCCACAGACCCGGCCACG
GAGGAGNATGCTCTACTTGTGATAAGGACTCGATAAAAACATACACACCC
TAGGCACAATATAGTAACTAACAAAAAGAACATAt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044833-exon-sc0006290-1491911889:422..936 | TCONS_00044833-exon-sc0006290-1491911889:422..936 | Clytia hemisphaerica | exon |
| TCONS_00044833-exon-sc0006290-1510915933:422..936 | TCONS_00044833-exon-sc0006290-1510915933:422..936 | Clytia hemisphaerica | exon |
| TCONS_00044833-exon-sc0006290-1575043694:422..936 | TCONS_00044833-exon-sc0006290-1575043694:422..936 | Clytia hemisphaerica | exon |
| TCONS_00044833-exon-sc0006290-1491911889:1738..1956 | TCONS_00044833-exon-sc0006290-1491911889:1738..1956 | Clytia hemisphaerica | exon |
| TCONS_00044833-exon-sc0006290-1510915933:1738..1956 | TCONS_00044833-exon-sc0006290-1510915933:1738..1956 | Clytia hemisphaerica | exon |
| TCONS_00044833-exon-sc0006290-1575043694:1738..1956 | TCONS_00044833-exon-sc0006290-1575043694:1738..1956 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006290 | supercontig | sc0006290:422..1956 + |
Blast
The following BLAST results are available for this feature:
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