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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044805 ID=TCONS_00044805|Name=TCONS_00044805|organism=Clytia hemisphaerica|type=transcript|length=967bp
CCTTGGTCAAgtaacaacctcgcaagctcggtcgttacttgacctcgggc
aatatttctcagtacagccctcactaaccggtcattattgtattagaatC
TCTCTATCTCAACTACCCCTATCTCACATTTCAGGGGGTACAAAGTTGGG
ATAATGGACCAGTGCTGAAAATGtgtactttcttctttttttgaatctAA
AATACATTTCAAAATCTACTTTTATTCTAAAAAGTGTTAGTAAAATGATA
ATTAACAAAAGAGTGCCAattgtaaaaaacaaaacaaacaacaaacacgG
TCTCTTCTAATGATTGCTTAACCCTTCTTGCTGACAGCtaatcaaatttt
caccaattaGAATGCATTTTATATTATATGGTCCTTCTTTTGAGCCACTA
AAAATGTCActaacgctaaaattaaaaacatttattgtcaaaaaatttga
aaagatgtGAGATCTAACATTAAACTGCATTGGATGTTTTATAGGACAAA
GCAATAAACAATGACAAAGGGCTTCAGATGAATAACCTTATTTCACAGTT
GGAAAGTTTTTGTGAAATATGAAAAACTTTGATCTCTGCAAAAGGGAGAT
AATCCTGGATAATCAAAGGATTTTTCACAACCTATTATCTAATAGACCAG
AATACACctaaaatatgatttttaaatGCAACTTTCGAAATCTCCAACAA
AGCATTTGGTTCCTTGGAAGGTTAAGATAGTAAATTTCCACTGAATAAAA
GACTTCACACCATCGATACTGCTGTTGAGAAGAATTATTCTACTATCAGT
CTCCTCCAAAGCGCTAAGGGTTAATAGGTGTATTAAAAACTCCAGTTAAA
CAACAACACATTACATTATAATCCGGGGGCaatcatatgatctggcctac
gttaTGTGCCGCGCTTAGGGGTGGAGTTTTTCAGCATactaaaatgcact
gtaagggtgtgtgtTTC Run BLAST on NCBI transcript from alignment at sc0006242:549..1515 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044805 ID=TCONS_00044805|Name=TCONS_00044805|organism=Clytia hemisphaerica|type=transcript|length=967bp|location=Sequence derived from alignment at sc0006242:549..1515 (Clytia hemisphaerica)
GAAacacacacccttacagtgcattttagtATGCTGAAAAACTCCACCCC
TAAGCGCGGCACAtaacgtaggccagatcatatgattGCCCCCGGATTAT
AATGTAATGTGTTGTTGTTTAACTGGAGTTTTTAATACACCTATTAACCC
TTAGCGCTTTGGAGGAGACTGATAGTAGAATAATTCTTCTCAACAGCAGT
ATCGATGGTGTGAAGTCTTTTATTCAGTGGAAATTTACTATCTTAACCTT
CCAAGGAACCAAATGCTTTGTTGGAGATTTCGAAAGTTGCatttaaaaat
catattttagGTGTATTCTGGTCTATTAGATAATAGGTTGTGAAAAATCC
TTTGATTATCCAGGATTATCTCCCTTTTGCAGAGATCAAAGTTTTTCATA
TTTCACAAAAACTTTCCAACTGTGAAATAAGGTTATTCATCTGAAGCCCT
TTGTCATTGTTTATTGCTTTGTCCTATAAAACATCCAATGCAGTTTAATG
TTAGATCTCacatcttttcaaattttttgacaataaatgtttttaatttt
agcgttagTGACATTTTTAGTGGCTCAAAAGAAGGACCATATAATATAAA
ATGCATTCtaattggtgaaaatttgattaGCTGTCAGCAAGAAGGGTTAA
GCAATCATTAGAAGAGACcgtgtttgttgtttgttttgttttttacaatT
GGCACTCTTTTGTTAATTATCATTTTACTAACACTTTTTAGAATAAAAGT
AGATTTTGAAATGTATTTTagattcaaaaaaagaagaaagtacaCATTTT
CAGCACTGGTCCATTATCCCAACTTTGTACCCCCTGAAATGTGAGATAGG
GGTAGTTGAGATAGAGAGattctaatacaataatgaccggttagtgaggg
ctgtactgagaaatattgcccgaggtcaagtaacgaccgagcttgcgagg
ttgttacTTGACCAAGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044805-exon-sc0006242-1491911889:549..1515 | TCONS_00044805-exon-sc0006242-1491911889:549..1515 | Clytia hemisphaerica | exon |
| TCONS_00044805-exon-sc0006242-1510915933:549..1515 | TCONS_00044805-exon-sc0006242-1510915933:549..1515 | Clytia hemisphaerica | exon |
| TCONS_00044805-exon-sc0006242-1575043694:549..1515 | TCONS_00044805-exon-sc0006242-1575043694:549..1515 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006242 | supercontig | sc0006242:549..1515 . |
Blast
The following BLAST results are available for this feature:
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