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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044755 ID=TCONS_00044755|Name=TCONS_00044755|organism=Clytia hemisphaerica|type=transcript|length=1227bp
AGGCTTGTGATATTAGAAGAAGAATCGAAGCGGTTACGAAGTGAGTTAAG
TGAAGAAAAAGCACGCCATAAATTCGACGTCGAAAAAGTCACCAATGCTA
AAGAAGAAGAGTTAGAAGAAGTACATAAAAGAGTAAAGAAAGCGAtcatg
aaaaaagaagaaacgacGCAATTACTGAGGGATCAAATGATGGCTGCGGA
AAAAAGGGCTGAACACTTGGAACAATTATTAGCGGAACAGCGGAAAAAGA
TTTTGGGTAAATAAAGAATCAGAATCACTTATTCCGTCGTGAGATTTTGG
TCCTGGGAAGCTCCGTTTTGGGTTCCTTGGCTCATCAGATTCTACAAGTC
TTTTGTCGGGTTTTTTATTCAAACTATCCCGTTTCATTGTctcttattta
tattttttacttctgtTTTTGATTGcaagtctttttttattaaagaCAAT
CCAGTTTGAAAGCAAGGTTATTCCTAACTAAGTCATTCCATACATTCCTT
TTCCAATCCTGCGACCTACTTCATTCCTTTTTGTACACTTATTGGCATTT
CTATATTCCCTTAATAATGTTTGTTGAGGTATATACGAGTGACCAGACTT
CAGTTATTTTCAGCCGTCTTTACTGAACAGTTCGACTCTGTTACGtatcg
taagttggtctaatgtcgacatcctttttctaatttccacacctttcttt
agagataggaataataagaaggttgGAATggctgattgaaactaattttc
ttcgcTTAGTAATtagagaggaaaaaatcttttgtctatcattgattccg
accttcctattttttatatatCTAAAGCAGGGTGTCGAAATTaaaagagg
gatgtcgacattagacgaACTCACGGTAAATATTCCCTTAGACATCCTTT
TATGGCCACAATGCCCTCAATATTAGTTTGAGTTAAAGATAGTCTGATCT
TGGTCATTGGCTGTATCAAgaaagttttctaaaaaagttttCATGTCTGT
TTCAATCTGGATTGAACTTTTCACCAAAAGTCATTGCACTGactggaaaa
attgtaaataaattatttagaattcaaaatgacttttaaaaagattaatt
tttgtatctttttttttgcgttgacttgtatatattcaaaaaaaatgCTA
GAGTATAATATTTACTGTATGATGTCATTTATCACAAAAAGATTAACTTA
AAGttcagtcaaaacaaaaaaatatat Run BLAST on NCBI transcript from alignment at sc0006147:10..2456+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044755 ID=TCONS_00044755|Name=TCONS_00044755|organism=Clytia hemisphaerica|type=transcript|length=2447bp|location=Sequence derived from alignment at sc0006147:10..2456+ (Clytia hemisphaerica)
AGGCTTGTGATATTAGAAGAAGAATCGAAGCGGTTACGAAGTGAGTTAAG
TGAAGAAAAAGCACGCCATAAATTCGACGTCGAAAAAGTCACCAATGCTA
AAGAAGAAGAGTTAGAAGAAGTACATAAAAGGTATAATAATAGAGGTCTG
GGGTCTGGTACTGACTTTTCTGAAGATGGTGGTCAGATCTCGACAAAATT
TGCTACATTTAGTATATTCAATTacataagatcacttttattttgaactg
aatgTGCTATTCAAATTGATGGGAAATTAACTGAATTGTTTGCAGTCAAC
GTTGGTGTCCGCCAAGGCTGTATATTGTCTCCCACGCTCTTCAATGATTC
ACTTTTACATGGGCGTAAGTAAGTTCAAGTTGAAAGAAATCTGACCCTTA
GAAGTTACTAAGAAAATAATGATTTTAACTACTAATTTTTGAGGCCATTT
TTATAACGTCTTAAAATCAATCTAAGAATCTCGAACTAAGAACATTGCAG
GCTGAGCCAAAATTTATGGAAAGCGTGTCTCAGCTGGctcacaacgttgt
ttcaacgtttatttaatgtTCACAAAGTCCTTATAACGttggatgaacgt
tgaaacaacgttgtttttCAGCTGGGCTATCGTTTTTCAATGGATTTTTG
ATTCTTACATTTTAATGATCGACTTATTTTCTACCCACAGAGTAAAGAAA
GCGAtcatgaaaaaagaagaaacgacGCAATTACTGAGGGATCAAATGAT
GGTAAGAATTCATAAGATGATACTAGTCATAAGGATGTACTCAACTGCAA
CGATCAAGAATGGATCAAATAAAAGTTTCAAGAATTCTTAtgcaaaagtt
tcaaaatacagggtgtccggaaaaaaagtcgagagaaaaaatcgagttcg
aacatgattctgaatagaaggttgttgcgtgtgtttaacaaaatataaga
aaatatataccaacacgATAACACAACACGTTTTTGCAACAgatattgag
aattgttttttgtaaaagttattcataaaaaatgttttataaaaaagcga
tgcattgtgggattgtttcgagtgtattacaatagaattccctcgaggaa
ttccgaagagatttctattgtaatacactcgatacaatcccacaatacat
cgcttttttagaaaaatcaaaaactccgataaggtctattaataTGACAC
AGGGAGAAACTTTGAAATACATTGCAAATTtatagtgaaacacacacaag
aattttctttctatagaagtggtacgacttgatacttttttccggacacc
ctgtatgacGCAGATAACGCTGCATCTTCccattcttaatatttttgtca
aatctaATCTTTCACGTTAAAGTCTAATCAAATATTTTCACTATTCCCAA
TTCATTTTTTAGGCTGCGGAAAAAAGGGCTGAACACTTGGAACAATTATT
AGCGGAACAGCGGAAAAAGATTTTGGGTAAATAAAGAATCAGAATCACTT
ATTCCGTCGTGAGATTTTGGTCCTGGGAAGCTCCGTTTTGGGTTCCTTGG
CTCATCAGATTCTACAAGTCTTTTGTCGGGTTTTTTATTCAAACTATCCC
GTTTCATTGTctcttatttatattttttacttctgtTTTTGATTGcaagt
ctttttttattaaagaCAATCCAGTTTGAAAGCAAGGTTATTCCTAACTA
AGTCATTCCATACATTCCTTTTCCAATCCTGCGACCTACTTCATTCCTTT
TTGTACACTTATTGGCATTTCTATATTCCCTTAATAATGTTTGTTGAGGT
ATATACGAGTGACCAGACTTCAGTTATTTTCAGCCGTCTTTACTGAACAG
TTCGACTCTGTTACGtatcgtaagttggtctaatgtcgacatcctttttc
taatttccacacctttctttagagataggaataataagaaggttgGAATg
gctgattgaaactaattttcttcgcTTAGTAATtagagaggaaaaaatct
tttgtctatcattgattccgaccttcctattttttatatatCTAAAGCAG
GGTGTCGAAATTaaaagagggatgtcgacattagacgaACTCACGGTAAA
TATTCCCTTAGACATCCTTTTATGGCCACAATGCCCTCAATATTAGTTTG
AGTTAAAGATAGTCTGATCTTGGTCATTGGCTGTATCAAgaaagttttct
aaaaaagttttCATGTCTGTTTCAATCTGGATTGAACTTTTCACCAAAAG
TCATTGCACTGactggaaaaattgtaaataaattatttagaattcaaaat
gacttttaaaaagattaatttttgtatctttttttttgcgttgacttgta
tatattcaaaaaaaatgCTAGAGTATAATATTTACTGTATGATGTCATTT
ATCACAAAAAGATTAACTTAAAGttcagtcaaaacaaaaaaatatat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044755-exon-sc0006147-1491911889:10..140 | TCONS_00044755-exon-sc0006147-1491911889:10..140 | Clytia hemisphaerica | exon |
| TCONS_00044755-exon-sc0006147-1510915933:10..140 | TCONS_00044755-exon-sc0006147-1510915933:10..140 | Clytia hemisphaerica | exon |
| TCONS_00044755-exon-sc0006147-1575043694:10..140 | TCONS_00044755-exon-sc0006147-1575043694:10..140 | Clytia hemisphaerica | exon |
| TCONS_00044755-exon-sc0006147-1491911889:700..760 | TCONS_00044755-exon-sc0006147-1491911889:700..760 | Clytia hemisphaerica | exon |
| TCONS_00044755-exon-sc0006147-1510915933:700..760 | TCONS_00044755-exon-sc0006147-1510915933:700..760 | Clytia hemisphaerica | exon |
| TCONS_00044755-exon-sc0006147-1575043694:700..760 | TCONS_00044755-exon-sc0006147-1575043694:700..760 | Clytia hemisphaerica | exon |
| TCONS_00044755-exon-sc0006147-1491911889:1422..2456 | TCONS_00044755-exon-sc0006147-1491911889:1422..2456 | Clytia hemisphaerica | exon |
| TCONS_00044755-exon-sc0006147-1510915933:1422..2456 | TCONS_00044755-exon-sc0006147-1510915933:1422..2456 | Clytia hemisphaerica | exon |
| TCONS_00044755-exon-sc0006147-1575043694:1422..2456 | TCONS_00044755-exon-sc0006147-1575043694:1422..2456 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006147 | supercontig | sc0006147:10..2456 + |
Blast
The following BLAST results are available for this feature:
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