TCONS_00044746 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044746
Unique NameTCONS_00044746
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2475

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044746 ID=TCONS_00044746|Name=TCONS_00044746|organism=Clytia hemisphaerica|type=transcript|length=2475bp
TTTCCATGACCACCATTGATTCTGGCAACAATCTGAGTGACATTGCTACC
GACAGCAGCATTCTCAGGAAGATTAAACATGGAGGATGCTGGTGAAACAA
CTGTAGGCTCTGGTCGACCATTAATGGTGATATAAGCGGTAGCATTTTGC
TTGGCGTAGAATGGAGGTGACCCACTATCTCTGACTCGgatttttaaatc
aatctgCTCGATATCATGGAGTGCTGAAATATTGTCGACAGTGACCAAAC
CGGTACTGTCGATAGTGAAACCTGGTATTGGAGGATTGATTTCGAAGACC
AATTGACCATTAGCTCCATTGTCAGGATCTGAAGCTAAGATTTTGACGAC
AAAGTTGGAGCTCATTGGTAACTGAACTGTATAAGTGGTCTGGTTGAAGG
AGGGTGGGTTATCATTTTGATCCAAGGTGATAATTTCGATTCTGATTGTG
GATGAAGTGCCAGCACTGTCAGTTGCTTTGATGAATAGATGGAAACTCTT
TTCGTATGGTTTCTCGTAATCGATGGGTTTGATGTTTGTGATAACACCAG
TTGTTGAATTAATGTTGAAGTATGGAGAATCACCAATAATTGAGAATGTG
ATTTGATCATTAAGATCATCATCAGATGCGGTGACTTTGAAGACAAACTG
ATTGATTTCTTTTGTCTCAGTGAAAGTGATTTTTTCTCCTGACGATCCAA
AATCTGGGGCGTTATCATTTTGATCAATGATTTGGACTGTGATGTTAACT
GCTTCAGAAGTATGAGAAGTCCCTTCATCTTTGGCAATCACTTGGAGAAT
GTATTCGTTATCATGTGTTTCAAAATCTATTGGTTGGATTAAACTGAGAT
CACCAGTTTGATGGTTGATTCTGAATTTATCTGAGTCTTTTGTCAGATAG
TATTCAATGTTTCCCTCAGAAACAGAATCTGAATCTGATGCTGAAACTGT
CAAAAGTGTTAGGTTGACTGGTGTTGTTTCTAAGATCTTGATGCTATAGG
TTTGAGCATCAAAACTTGGAGTATTGTCATTCATGTCTTGGAGATGGATC
AAAAGTATCGTGTGATTGGATCTCAAACCTGAATCTGTAGCGAAAATAGT
GATGGTGTACTGGGGAACTTCCTCATAATTCAGTCCTCTGATGTTTCGCA
GGACACCAGTCTTTTGGTTAATTTCGAAAGTATATTGTGAAGTCTCATCA
ATTGAATAAGTAATAACTTCATCACGATCCTCATCCGTAGCTTTGAAAGT
TTCTGCAATATCCAGATTTTCATTGATATTTATTTCCCGCAAATTATCGG
GGAATTCTGGTGAGAATTCGTTGACGTTGAGAACCTTGATGTTGACATTG
ATGGTATTGTTTGATCGTTTGGCTGGAGTTCCACTATCAATAGCTTGGAC
ACTAATGGAATGAGCTGTTGAAGTCTCGTAGTCCAGAGTCTTGTTTAAGA
TTAAATTCGTTTCATTCTCAATGATGAAGAATTCATCCTTGTTCAAGATG
CGGAAAGATATTCCTTGGTTACTGGCGTCACCATCTGTGGCGTAACCTTC
AAAGTTGAACAAAACTGTGCCTGAAATTGCATTTTCTGGAATCTCAATTT
CCACAGATTCATCACGAATCTCTGGAGCAAAttcatttttatcttcaatG
TTAACGATCAGCGAAGCTTGGCCTTTGACATCTGGCGTTTTCTGGTCAGC
AACGTAAATCGTGGCAAAGATTATCTTAACTTTTTCATAATCCAGTGTAA
CAAAGTTGGTCACTGTGCCGTTATCTTTGTTGATTTGTAGATATCTTTGT
CCATCTGTTGGTTCCTCAGTTAAGGAgtattcaactttttgaatACTTTT
TGGGTTTAGAATAAACACATCTGAGAAGAATCTGAAATCCTCGTTTTCAA
CAGCCGTATCATTATAGATAGATTTTTGGAAATAAGGAACAATAATCTCG
TCGAGGAAGACTTGGATATTGATGGTTGCTAGATTATCTGAGGACAGTGC
TGGTTGGCCTTGGTCAGAGACCCTAGCTTGAAGAACAAACGAACTATTTC
TGTAATGATCAAGTTCCTTGGCAAGCTTCAAGTTACCAGTGTTAGTTTCC
AGTTCAAAGGTGCCTTCAGAGTTATCAGAAATGAGTTGATAAGTCAATCG
AGAATTACTGGTGGAATCTGGATCTGAAGCTTGAAAATGCACCAGGAAGG
TTCCAACAGATGTGGCATTACTGAGTGAGATTTCATATTCTGTTTGTCGG
AAGACTGGTTTCTCATTCACATCCTCAACATCAATCACCAGTGTCATTAC
ACTTTGCAAATAACCATCCGATGCAATGATGTTGACAGCTATTTGGCTGA
TTATCTTATGGTCCAAAGGACGTATGATTCTAACGGTACCATTGTTTCGG
TCGATTAGGAAATACCCTAAACCACCACGCAGAGAGTAAGACAAAGGCTC
CAAAGAGTCTCCATCTGTTGCCAAA
Run BLAST on NCBI

protein sequence of TCONS_00044746-protein

>TCONS_00044746-protein ID=TCONS_00044746-protein|Name=TCONS_00044746-protein|organism=Clytia hemisphaerica|type=polypeptide|length=824bp
LATDGDSLEPLSYSLRGGLGYFLIDRNNGTVRIIRPLDHKIISQIAVNII
ASDGYLQSVMTLVIDVEDVNEKPVFRQTEYEISLSNATSVGTFLVHFQAS
DPDSTSNSRLTYQLISDNSEGTFELETNTGNLKLAKELDHYRNSSFVLQA
RVSDQGQPALSSDNLATINIQVFLDEIIVPYFQKSIYNDTAVENEDFRFF
SDVFILNPKSIQKVEYSLTEEPTDGQRYLQINKDNGTVTNFVTLDYEKVK
IIFATIYVADQKTPDVKGQASLIVNIEDKNEFAPEIRDESVEIEIPENAI
SGTVLFNFEGYATDGDASNQGISFRILNKDEFFIIENETNLILNKTLDYE
TSTAHSISVQAIDSGTPAKRSNNTINVNIKVLNVNEFSPEFPDNLREINI
NENLDIAETFKATDEDRDEVITYSIDETSQYTFEINQKTGVLRNIRGLNY
EEVPQYTITIFATDSGLRSNHTILLIHLQDMNDNTPSFDAQTYSIKILET
TPVNLTLLTVSASDSDSVSEGNIEYYLTKDSDKFRINHQTGDLSLIQPID
FETHDNEYILQVIAKDEGTSHTSEAVNITVQIIDQNDNAPDFGSSGEKIT
FTETKEINQFVFKVTASDDDLNDQITFSIIGDSPYFNINSTTGVITNIKP
IDYEKPYEKSFHLFIKATDSAGTSSTIRIEIITLDQNDNPPSFNQTTYTV
QLPMSSNFVVKILASDPDNGANGQLVFEINPPIPGFTIDSTGLVTVDNIS
ALHDIEQIDLKIRVRDSGSPPFYAKQNATAYITINGRPEPTVVSPASSMF
NLPENAAVGSNVTQIVARINGGHG
Run BLAST on NCBI

transcript from alignment at sc0006130:24..2498

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044746 ID=TCONS_00044746|Name=TCONS_00044746|organism=Clytia hemisphaerica|type=transcript|length=2475bp|location=Sequence derived from alignment at sc0006130:24..2498 (Clytia hemisphaerica)
TTTGGCAACAGATGGAGACTCTTTGGAGCCTTTGTCTTACTCTCTGCGTG
GTGGTTTAGGGTATTTCCTAATCGACCGAAACAATGGTACCGTTAGAATC
ATACGTCCTTTGGACCATAAGATAATCAGCCAAATAGCTGTCAACATCAT
TGCATCGGATGGTTATTTGCAAAGTGTAATGACACTGGTGATTGATGTTG
AGGATGTGAATGAGAAACCAGTCTTCCGACAAACAGAATATGAAATCTCA
CTCAGTAATGCCACATCTGTTGGAACCTTCCTGGTGCATTTTCAAGCTTC
AGATCCAGATTCCACCAGTAATTCTCGATTGACTTATCAACTCATTTCTG
ATAACTCTGAAGGCACCTTTGAACTGGAAACTAACACTGGTAACTTGAAG
CTTGCCAAGGAACTTGATCATTACAGAAATAGTTCGTTTGTTCTTCAAGC
TAGGGTCTCTGACCAAGGCCAACCAGCACTGTCCTCAGATAATCTAGCAA
CCATCAATATCCAAGTCTTCCTCGACGAGATTATTGTTCCTTATTTCCAA
AAATCTATCTATAATGATACGGCTGTTGAAAACGAGGATTTCAGATTCTT
CTCAGATGTGTTTATTCTAAACCCAAAAAGTattcaaaaagttgaatacT
CCTTAACTGAGGAACCAACAGATGGACAAAGATATCTACAAATCAACAAA
GATAACGGCACAGTGACCAACTTTGTTACACTGGATTATGAAAAAGTTAA
GATAATCTTTGCCACGATTTACGTTGCTGACCAGAAAACGCCAGATGTCA
AAGGCCAAGCTTCGCTGATCGTTAACattgaagataaaaatgaaTTTGCT
CCAGAGATTCGTGATGAATCTGTGGAAATTGAGATTCCAGAAAATGCAAT
TTCAGGCACAGTTTTGTTCAACTTTGAAGGTTACGCCACAGATGGTGACG
CCAGTAACCAAGGAATATCTTTCCGCATCTTGAACAAGGATGAATTCTTC
ATCATTGAGAATGAAACGAATTTAATCTTAAACAAGACTCTGGACTACGA
GACTTCAACAGCTCATTCCATTAGTGTCCAAGCTATTGATAGTGGAACTC
CAGCCAAACGATCAAACAATACCATCAATGTCAACATCAAGGTTCTCAAC
GTCAACGAATTCTCACCAGAATTCCCCGATAATTTGCGGGAAATAAATAT
CAATGAAAATCTGGATATTGCAGAAACTTTCAAAGCTACGGATGAGGATC
GTGATGAAGTTATTACTTATTCAATTGATGAGACTTCACAATATACTTTC
GAAATTAACCAAAAGACTGGTGTCCTGCGAAACATCAGAGGACTGAATTA
TGAGGAAGTTCCCCAGTACACCATCACTATTTTCGCTACAGATTCAGGTT
TGAGATCCAATCACACGATACTTTTGATCCATCTCCAAGACATGAATGAC
AATACTCCAAGTTTTGATGCTCAAACCTATAGCATCAAGATCTTAGAAAC
AACACCAGTCAACCTAACACTTTTGACAGTTTCAGCATCAGATTCAGATT
CTGTTTCTGAGGGAAACATTGAATACTATCTGACAAAAGACTCAGATAAA
TTCAGAATCAACCATCAAACTGGTGATCTCAGTTTAATCCAACCAATAGA
TTTTGAAACACATGATAACGAATACATTCTCCAAGTGATTGCCAAAGATG
AAGGGACTTCTCATACTTCTGAAGCAGTTAACATCACAGTCCAAATCATT
GATCAAAATGATAACGCCCCAGATTTTGGATCGTCAGGAGAAAAAATCAC
TTTCACTGAGACAAAAGAAATCAATCAGTTTGTCTTCAAAGTCACCGCAT
CTGATGATGATCTTAATGATCAAATCACATTCTCAATTATTGGTGATTCT
CCATACTTCAACATTAATTCAACAACTGGTGTTATCACAAACATCAAACC
CATCGATTACGAGAAACCATACGAAAAGAGTTTCCATCTATTCATCAAAG
CAACTGACAGTGCTGGCACTTCATCCACAATCAGAATCGAAATTATCACC
TTGGATCAAAATGATAACCCACCCTCCTTCAACCAGACCACTTATACAGT
TCAGTTACCAATGAGCTCCAACTTTGTCGTCAAAATCTTAGCTTCAGATC
CTGACAATGGAGCTAATGGTCAATTGGTCTTCGAAATCAATCCTCCAATA
CCAGGTTTCACTATCGACAGTACCGGTTTGGTCACTGTCGACAATATTTC
AGCACTCCATGATATCGAGcagattgatttaaaaatcCGAGTCAGAGATA
GTGGGTCACCTCCATTCTACGCCAAGCAAAATGCTACCGCTTATATCACC
ATTAATGGTCGACCAGAGCCTACAGTTGTTTCACCAGCATCCTCCATGTT
TAATCTTCCTGAGAATGCTGCTGTCGGTAGCAATGTCACTCAGATTGTTG
CCAGAATCAATGGTGGTCATGGAAA

Coding sequence (CDS) from alignment at sc0006130:24..2498

>TCONS_00044746 ID=TCONS_00044746|Name=TCONS_00044746|organism=Clytia hemisphaerica|type=CDS|length=2472bp|location=Sequence derived from alignment at sc0006130:24..2498 (Clytia hemisphaerica)
TTGGCAACAGATGGAGACTCTTTGGAGCCTTTGTCTTACTCTCTGCGTGG
TGGTTTAGGGTATTTCCTAATCGACCGAAACAATGGTACCGTTAGAATCA
TACGTCCTTTGGACCATAAGATAATCAGCCAAATAGCTGTCAACATCATT
GCATCGGATGGTTATTTGCAAAGTGTAATGACACTGGTGATTGATGTTGA
GGATGTGAATGAGAAACCAGTCTTCCGACAAACAGAATATGAAATCTCAC
TCAGTAATGCCACATCTGTTGGAACCTTCCTGGTGCATTTTCAAGCTTCA
GATCCAGATTCCACCAGTAATTCTCGATTGACTTATCAACTCATTTCTGA
TAACTCTGAAGGCACCTTTGAACTGGAAACTAACACTGGTAACTTGAAGC
TTGCCAAGGAACTTGATCATTACAGAAATAGTTCGTTTGTTCTTCAAGCT
AGGGTCTCTGACCAAGGCCAACCAGCACTGTCCTCAGATAATCTAGCAAC
CATCAATATCCAAGTCTTCCTCGACGAGATTATTGTTCCTTATTTCCAAA
AATCTATCTATAATGATACGGCTGTTGAAAACGAGGATTTCAGATTCTTC
TCAGATGTGTTTATTCTAAACCCAAAAAGTattcaaaaagttgaatacTC
CTTAACTGAGGAACCAACAGATGGACAAAGATATCTACAAATCAACAAAG
ATAACGGCACAGTGACCAACTTTGTTACACTGGATTATGAAAAAGTTAAG
ATAATCTTTGCCACGATTTACGTTGCTGACCAGAAAACGCCAGATGTCAA
AGGCCAAGCTTCGCTGATCGTTAACattgaagataaaaatgaaTTTGCTC
CAGAGATTCGTGATGAATCTGTGGAAATTGAGATTCCAGAAAATGCAATT
TCAGGCACAGTTTTGTTCAACTTTGAAGGTTACGCCACAGATGGTGACGC
CAGTAACCAAGGAATATCTTTCCGCATCTTGAACAAGGATGAATTCTTCA
TCATTGAGAATGAAACGAATTTAATCTTAAACAAGACTCTGGACTACGAG
ACTTCAACAGCTCATTCCATTAGTGTCCAAGCTATTGATAGTGGAACTCC
AGCCAAACGATCAAACAATACCATCAATGTCAACATCAAGGTTCTCAACG
TCAACGAATTCTCACCAGAATTCCCCGATAATTTGCGGGAAATAAATATC
AATGAAAATCTGGATATTGCAGAAACTTTCAAAGCTACGGATGAGGATCG
TGATGAAGTTATTACTTATTCAATTGATGAGACTTCACAATATACTTTCG
AAATTAACCAAAAGACTGGTGTCCTGCGAAACATCAGAGGACTGAATTAT
GAGGAAGTTCCCCAGTACACCATCACTATTTTCGCTACAGATTCAGGTTT
GAGATCCAATCACACGATACTTTTGATCCATCTCCAAGACATGAATGACA
ATACTCCAAGTTTTGATGCTCAAACCTATAGCATCAAGATCTTAGAAACA
ACACCAGTCAACCTAACACTTTTGACAGTTTCAGCATCAGATTCAGATTC
TGTTTCTGAGGGAAACATTGAATACTATCTGACAAAAGACTCAGATAAAT
TCAGAATCAACCATCAAACTGGTGATCTCAGTTTAATCCAACCAATAGAT
TTTGAAACACATGATAACGAATACATTCTCCAAGTGATTGCCAAAGATGA
AGGGACTTCTCATACTTCTGAAGCAGTTAACATCACAGTCCAAATCATTG
ATCAAAATGATAACGCCCCAGATTTTGGATCGTCAGGAGAAAAAATCACT
TTCACTGAGACAAAAGAAATCAATCAGTTTGTCTTCAAAGTCACCGCATC
TGATGATGATCTTAATGATCAAATCACATTCTCAATTATTGGTGATTCTC
CATACTTCAACATTAATTCAACAACTGGTGTTATCACAAACATCAAACCC
ATCGATTACGAGAAACCATACGAAAAGAGTTTCCATCTATTCATCAAAGC
AACTGACAGTGCTGGCACTTCATCCACAATCAGAATCGAAATTATCACCT
TGGATCAAAATGATAACCCACCCTCCTTCAACCAGACCACTTATACAGTT
CAGTTACCAATGAGCTCCAACTTTGTCGTCAAAATCTTAGCTTCAGATCC
TGACAATGGAGCTAATGGTCAATTGGTCTTCGAAATCAATCCTCCAATAC
CAGGTTTCACTATCGACAGTACCGGTTTGGTCACTGTCGACAATATTTCA
GCACTCCATGATATCGAGcagattgatttaaaaatcCGAGTCAGAGATAG
TGGGTCACCTCCATTCTACGCCAAGCAAAATGCTACCGCTTATATCACCA
TTAATGGTCGACCAGAGCCTACAGTTGTTTCACCAGCATCCTCCATGTTT
AATCTTCCTGAGAATGCTGCTGTCGGTAGCAATGTCACTCAGATTGTTGC
CAGAATCAATGGTGGTCATGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028358XLOC_028358Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044746-proteinTCONS_00044746-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044746-exon-sc0006130-1491911889:24..2498TCONS_00044746-exon-sc0006130-1491911889:24..2498Clytia hemisphaericaexon
TCONS_00044746-exon-sc0006130-1510915933:24..2498TCONS_00044746-exon-sc0006130-1510915933:24..2498Clytia hemisphaericaexon
TCONS_00044746-exon-sc0006130-1575043694:24..2498TCONS_00044746-exon-sc0006130-1575043694:24..2498Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0006130supercontigsc0006130:24..2498 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.71086	1.87607	1.43587	0.591748	0.190106	0.24617	0.251157	0.244231	0.17549	0.436239	0.373277	0.185811	2.71149	2.54582	0.109153	0.310004	0.0964799	0.131427	3.63399	4.05159	0.763871	0.260607	0.346776	0.499633	1.97893	2.03531	0.95638	0.692472	0.519063	0.631204
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR002126Cadherin
IPR020894Cadherin_CS
IPR015919Cadherin-like
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005886plasma membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
Vocabulary: Biological Process
TermDefinition
GO:0007156homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007155cell adhesion
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007155 cell adhesion
biological_process GO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules
cellular_component GO:0016020 membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005509 calcium ion binding
Blast
[Close]
BLAST of TCONS_00044746 vs. Swiss-Prot (Human)
Match: CELR2 (Cadherin EGF LAG seven-pass G-type receptor 2 OS=Homo sapiens GN=CELSR2 PE=1 SV=1)

HSP 1 Score: 229.18 bits (583), Expect = 1.194e-61
Identity = 213/818 (26.04%), Postives = 372/818 (45.48%), Query Frame = -2 
Query:   72 YFLIDRNNGTVRIIRPLDHKIISQIAVNIIASDGYL---QSVMTLVIDVEDVNE-KPVFRQTEYEISLSNATSVGTFLVHFQASDPDSTSNSRLTYQLISDNSEGT----FELETNTGNLKLAKELDHYRNSSFVLQARVSDQGQPALSSDNLATINIQVFLDEIIVPYFQKSIYNDTAVENEDFRFFSDVFILNPKSIQK-----VEYSLTEEPTDGQRYLQINKDNGTVTNFVTLDYEKVKIIFATIYVADQKTPDVKGQASLI-VNIEDKNEFAPEIRDESVEIEIPENAISGTVLFNFEGYATDGDA-SNQGISFRI--LNKDEFFIIENETNLI-LNKTLDYETSTAHSISVQAIDSGTPAKRSNNTINVNIKVLNVNEFSPEFPDNLREININENLDIAE---TFKATDEDRDEVITYSIDE-TSQYTFEINQKT--GVLRNIRGLNYEEVPQYTITIFATDSGLRSNHTILLIHLQDMNDNTPSFDAQTYSIKILETTPVNLTLLTVSASDSDSVSEGNIEYYLTKDSDKFRINHQTGDLSLIQPIDFETHDNEYILQVIAKDEGTSHTSEAVNITVQIIDQNDNAPDFGSSGEKITFTETKEINQFVFKVTASDDD--LNDQITFSI---IGDSPYFNINSTTGVITNIKPIDYEKPYEKSFHLFIKATDSAGTSSTIRIEIITLDQNDNPPSFNQTTYTVQLPMSSNF---VVKILASDPDNGANGQLVFEI-NPPIPG-FTIDSTGLVTVDNISALHDIEQIDLK--IRVRDSGSPPFYAKQNATAYITINGRPE-PTVVSPASSMFN 2414
            +F +D   G V     LD +  S     + A D  +    ++ TL I V D N+  PVF Q EY+ SL     VG  ++  +A+D D+  N+ + Y+L+ + S G+    FE++  +G ++    +D     S+ L    SDQG+        A + + V  D    P F +  Y       ED    + V  +      K     V YS+      GQ YL  +   G +     LDYE  K     +   D   P +   + L+ V + D N+ AP       +  + E+   G ++ + +  A D DA  N  + +R+  +  D  F I N T  I +   LD E    +S  V+A D GTPA  ++ +++V   VL+VN+ +P F      + +NE+  +     T  A D D   VITY I    ++  F I  ++  G++     L+Y+   QY + + A+D G R +   +++++ D N + P F +  Y++ + E  P   T++ +SA+D D+     I Y++     +FRI+  TG ++    +D+E   + Y L + A+D G    S+   + + + D NDNAP F     + +  E       V +++A+D D  LN ++ ++          F + ST+G++  ++ +D E   +     +          + + + +  LD NDNPP F Q  + V +  +S     V ++ A+DPD G N Q++++I    IP  F +D    +    ++AL D++  D    + V  + S P  ++  AT ++ +  R + P V+     +FN
Sbjct:  231 FFSLDPVTGAVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLL-EGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRY--VVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYL--DAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYLVLHVQ--AIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVT--VLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDAHSVITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLAVTASD-GTRQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYEDQVS-YTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLD----IFSGELTALVDLDYEDRPEYVLVIQATSAPLVSR--ATVHVRLLDRNDNPPVLGNFEILFN 1031

HSP 2 Score: 224.557 bits (571), Expect = 3.095e-60
Identity = 214/763 (28.05%), Postives = 345/763 (45.22%), Query Frame = -2 
Query:  321 ATDGDSL--EPLSYSLRGGLG-----YFLIDRNNGTVRIIRPLDHKIISQIAVNIIASD-----GYLQSVMTLVIDVEDVNEK-PVFRQTEYEISLSNATSVGTFLVHFQASDPDSTSNSRLTYQLISDNSEGTFELETNTGNLKLAKELDHYRNSSFVLQARVSDQGQPALSSDNLATINIQVFLDEIIVPYFQKSIYNDTAVENEDFRFFSDVFILNPKSIQ-------KVEYSLTEEPTDGQRYLQINKDNGTVTNFVTLDYEKVKIIFATIYVADQKTPDVKGQASLIVNIEDKNEFAPEIRDESVEIEIPENAISGTVLFNFEGYATDGDASNQGISFRIL--NKDEFFIIENETN---LILNKTLDYETSTAHSISVQAIDSGTPAKRSNNTINVNIKVLNVNEFSPEFPDNLREININENLDIAET---FKATDEDRDE--VITYSIDETSQYTFEINQKTGVLRNIRGLNYEEVPQYTITIFATDSGL--RSNHTILLIHLQDMNDNTPSFDAQTYSIKILETTPVNLTLLTVSASDSDSVSEGNIEYYL---TKDSDKFRINHQTGDLSLIQPIDFETHDNEYILQVIAKDEGTSHTSEAVNITVQIIDQNDNAPDFGSSGEKITFTETKEINQFVFKVTASDDD--LNDQITFSII-GDSP-YFNINSTTGVITNIKPIDYEKPYEKSFHLFIKATDSAGTSSTIRIEIITLDQNDNPPS-------FNQTTYTVQLPMSSNFVVKILASDPD 2471
            ATDGD+     + Y L  G G      F ID  +G +R   P+D + +    + + ASD     G   +   + + VED N+  P F +  Y + +    + G  ++   ASD D  SN+ + Y ++S N+ G F L+  TG L +   LD+     + L+ R  D G+P LS+ +   + +QV       P F  + +  T +E+    +     +L+ ++I        ++EY L     D      IN   G ++    LD E+V      +   D  TP +   AS+ V + D N+  P        + + E+A  GT +      A D DA +  I+++I   N    F I +++    + L   LDY+    + ++V A D GT      +T  + + V + N   P F  +   +N+NE+     T     ATDED  E   ITY + E S   F I+  TG +     L+YE+   YT+ I A D+G+  +S+ T L I + D+NDN P F   +Y   + E  P   ++L +SA+D DS   G + Y           F +   +G +  ++ +D E +  +Y+L+  A D+G       + +TV ++D NDN P F      +   E   I   V +VTA+D D   N QI + I+ G+ P  F ++  +G +T +  +DYE   E  + L I+AT SA   S   + +  LD+NDNPP        FN              + ++ A DPD
Sbjct:  313 ATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPPLSNVS-GLVTVQVLDINDNAPIFVSTPFQATVLESVPLGY----LVLHVQAIDADAGDNARLEYRLAGVGHDFP--FTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVS--AVDRDAHSV-ITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKLERQYVLAVTASD-GT----RQDTAQIVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFM-EDSIPQFRIDADTGAVTTQAELDYEDQVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTSVLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRE-NVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNPPVFEQDEFDVFVEENSPIGLAVARVTATDPDEGTNAQIMYQIVEGNIPEVFQLDIFSGELTALVDLDYEDRPE--YVLVIQAT-SAPLVSRATVHVRLLDRNDNPPVLGNFEILFNNYVTNRSSSFPGGAIGRVPAHDPD 1055

HSP 3 Score: 217.238 bits (552), Expect = 6.331e-58
Identity = 211/792 (26.64%), Postives = 370/792 (46.72%), Query Frame = -2 
Query:   24 DVNEKPVFRQTEYEISLSNATSVGTFLVHFQASDPDSTSNSRLTYQ---LISDNSEGTFELETNTGNLKLAKELDHYRNSSFVLQARVSDQGQPALSSDNLATINIQVFLDEIIVPYFQKSIYNDTAVENEDFRFFSDVFILN------PKSIQKVEYSLTEEPTDGQRYLQINKDNGTVTNFVTLDYEKVKIIFATIYVADQ-KTPDVKG-QASLIVNIEDKNEFAPEIRDESVEIEIPENAISGTVLFNFEGYATDGD-ASNQGISFRILN---KDEFFIIENETNLILNKTLDYETSTAHSISVQAIDSGTPAKRSNNTINVNIKVLNVNEFSPEFPDNLREININENLDIAET---FKATDEDR--DEVITYSIDETSQ-YTFEINQKTGVLRNIRGLNYEEVPQYTITIFATDSG---LRSNHTILLIHLQDMNDNTPSFDAQTYSIKILETTPVNLTLLTVSASDSDSVSEGNIEYYLTKDS--DKFRINHQTGD--LSLIQPIDFETHDNEYILQVIAKDEGTSHTSEAVNITVQIIDQNDNAPDFGSSGEKITFTETKEINQFVFKVTASDDDL--NDQITFSIIGDSPYFNINSTTGVITNIKPIDYEKPYEKSFHLFIKATDSA--GTSSTIRIEIITLDQNDNPPSFNQTTYTVQL-----PMSSNFVVKILASDPDNGANGQLVFEIN---PPIPGFTIDST-GLVTVDNISALHDIEQIDLKIRVRDSGSPPFYAKQNATAYI-TINGRPEPTVVSPASSMFNLPENAAVGSNVTQIVA 2273
            +VN  P F+   Y+ ++      GT +   +A DPD     RL Y    L    S   F L+  TG +  A+ELD    S+ V +    D G P  S+  LAT+ I V       P F++  Y ++  EN +  +  +V  +       P +   +   L           +I+  +G +     +D E+V+    T+  +DQ + P  +   A++ +++ED N+ AP+  ++   +++ E+   G  +      A+D D  SN  + + I++   + +F++      L +   LDYET+  +++ V+A D G P   SN +  V ++VL++N+ +P F     +  + E++ +       +A D D   +  + Y +      + F IN  TG +     L+ EEV  Y+  + A D G   L ++ ++ +  L D+NDN P+F    Y++++ E   V  +++TVSA D D+ S   I Y +T  +  ++F I  Q+G   +SL  P+D++  + +Y+L V A D     T++   I V + D N + P F SS   +   E +     V  ++A+D+D   N +IT+ +    P F I++ TG +T    +DYE   + S+ L I A D+     S T  +EI+  D NDN P F + +Y   +     P +S  V++I A+D D+G NG++ +           F ++ST G+V         ++ Q  L+    D G PP       T  +  +N  P P        +F + EN+ +G  V ++ A
Sbjct:  174 NVNTAPQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTTAEELDRETKSTHVFRVTAQDHGMPRRSA--LATLTILVTDTNDHDPVFEQQEYKESLRENLEVGY--EVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVESYQLTVEASDQGRDPGPRSTTAAVFLSVEDDNDNAPQFSEKRYVVQVREDVTPGAPVLRVT--ASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLDYETTKEYTLRVRAQDGGRPP-LSNVSGLVTVQVLDINDNAPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAGVGHDFPFTINNGTGWISVAAELDREEVDFYSFGVEARDHGTPALTASASVSVTVL-DVNDNNPTFTQPEYTVRLNEDAAVGTSVVTVSAVDRDAHSV--ITYQITSGNTRNRFSITSQSGGGLVSLALPLDYKL-ERQYVLAVTASDGTRQDTAQ---IVVNVTDANTHRPVFQSSHYTVNVNEDRPAGTTVVLISATDEDTGENARITYFMEDSIPQFRIDADTGAVTTQAELDYED--QVSYTLAITARDNGIPQKSDTTYLEILVNDVNDNAPQFLRDSYQGSVYEDVPPFTS--VLQISATDRDSGLNGRVFYTFQGGDDGDGDFIVESTSGIVRTLRRLDRENVAQYVLRAYAVDKGMPPARTPMEVTVTVLDVNDNP-PVFEQDEFDVF-VEENSPIGLAVARVTA 945

HSP 4 Score: 134.806 bits (338), Expect = 5.566e-32
Identity = 136/480 (28.33%), Postives = 218/480 (45.42%), Query Frame = -2 
Query:    6 NVNEFSPEFPDNLREININENLDIAE---TFKATDEDRDEV--ITYSID----ETSQYTFEINQKTGVLRNIRGLNYEEVPQYTITIFATDSGL--RSNHTILLIHLQDMNDNTPSFDAQTYSIKILETTPVNLTLLTVSASDSDSVSEGNIEYYLTKD-----SDKFRINHQTGDLSLIQPIDFETHDNEYILQVIAKDEGTS----HTSEAVNITVQIIDQNDNAPDFGSSGEKITFTETKEINQFVFKVTASDDD--LNDQITFSIIGDSP--YFNINSTTGVITNIKPIDYEKPYEKSFHLFIKATDS-----AGTSSTIRIEIITLDQNDNPPSFNQTTYTVQLPMS---SNFVVKILASDPDNGANGQLVFE---INPPIPGFTIDS-TGLVTVDNISALHDIEQID---LKIRVRDSGSPPFYAKQNATAYITINGRPEPTVVSPASSMFNLPENAAVGSNVTQIVARINGGH 1328
            NVN  +P+F     +  + EN        + +A D D  E   + Y++D      S   F ++  TG +     L+ E    +   + A D G+  RS    L I + D ND+ P F+ Q Y   + E   V   +LTV A+D D+    NI Y L +      S+ F I+ ++G +    P+D E  ++ Y L V A D+G       T+ AV ++V+  D NDNAP F      +   E       V +VTASD D   N  + +SI+  +    F +++ TG +  + P+DYE    K + L ++A D      +  S  + +++  LD NDN P F  T +   +  S      V+ + A D D G N +L +    +    P FTI++ TG ++V   +A  D E++D     +  RD G+P   A  + +  +       PT   P  ++  L E+AAVG++V  + A     H
Sbjct:  174 NVNT-APQFQPPSYQATVPENQPAGTPVASLRAIDPDEGEAGRLEYTMDALFDSRSNQFFSLDPVTGAVTTAEELDRETKSTHVFRVTAQDHGMPRRSALATLTILVTDTNDHDPVFEQQEYKESLRENLEVGYEVLTVRATDGDAPPNANILYRLLEGSGGSPSEVFEIDPRSGVIRTRGPVDREEVES-YQLTVEASDQGRDPGPRSTTAAVFLSVE--DDNDNAPQFSEKRYVVQVREDVTPGAPVLRVTASDRDKGSNAVVHYSIMSGNARGQFYLDAQTGALDVVSPLDYET--TKEYTLRVRAQDGGRPPLSNVSGLVTVQV--LDINDNAPIFVSTPFQATVLESVPLGYLVLHVQAIDADAGDNARLEYRLAGVGHDFP-FTINNGTGWISV---AAELDREEVDFYSFGVEARDHGTPALTASASVSVTVLDVNDNNPTFTQPEYTV-RLNEDAAVGTSVVTVSAVDRDAH 640
The following BLAST results are available for this feature:
BLAST of TCONS_00044746 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CELR21.194e-6126.04Cadherin EGF LAG seven-pass G-type receptor 2 OS=H... [more]
back to top