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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044727 ID=TCONS_00044727|Name=TCONS_00044727|organism=Clytia hemisphaerica|type=transcript|length=1200bp
AAATCAGgacattacaagatcttttggaagacggcgtttgtccacggaag
aatatttcaatgaattagaaaaaagcccgtgcggtcagcgattctataaa
aagcgaccgcgtgggctgtctggggcgtccggggtagtctctcaaaaaca
aataatacggaccccgggcacgcatcaaaaaaaccccggactgtccggag
cataggcagggtcgtattgtttcgagctccaaccatagcctaaccctaac
tgataataacccaattcctagccaatctgatacgtaaccacacccaaacc
acacccactctcaaccctaccaggtcgactgcaggtcctgacactattcc
cgcataccggatccgaaaaatagatacatgtctttcgtctttatgaagaa
gccttcaccgttGAAAACTTGTTGAAACacacacagccagaaagagaaaa
caaaagtgCATTGCATGGGGGCCTGATAGAAAGAAAATCTATCAGACCTG
CACTCCTGCACTATCAATAAAATGTTAATAAATGAAAATGTAAGACTTAC
TTTAAAAAAACTATGAAGGTTTCTTCCATTGGCTTATCTGGCACTGCCTG
GCTGTCTGGCGCCACTTTTTTCACTCTGAAATTTTCCTGAGAGTAAGCTT
CTTAGATAGCATGAAAATAAGTTGCTAGTCTAGTCTAATGGACATTTCAG
GAGCACAACTTTTACCATCCGTTATTTGGAAATCTTTTCACGGCTCCTTT
CCCATAAACCGGAGTTTAAGATTTGTCTATCCTACAAATCGCAAATGTGA
TTTAGCTTTTACGTGCGTATATCACTACATTCTAAGTTCTTCATTTTTGA
TAAAGATGCAGGATTTGTTCGTCTTGGCATGAGAGGGAGAGAATGATGGA
AACCATCGAAAGCAAAAGCAGGTATAAAAACATAACTATCTAAAATCCAG
AATGGATATGATTCGCTTTGTTTGTAAAATAGTATGTGATTTTatctata
gaccttttcactTTTCAGCCATTCATTTCATCTTCAATCTGACAGTTTTA
TGTCGAACCAGTCACAGCTATCACAACTAGATACTGTCAACACTGCTCTA
agtctaacttgggacgattggtcgaaacatgggactgttgcatatctagt
ctgtattttcacttactgtaaaatcgacagagaaatcgtgtattttttac Run BLAST on NCBI transcript from alignment at sc0006094:668..1867 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044727 ID=TCONS_00044727|Name=TCONS_00044727|organism=Clytia hemisphaerica|type=transcript|length=1200bp|location=Sequence derived from alignment at sc0006094:668..1867 (Clytia hemisphaerica)
gtaaaaaatacacgatttctctgtcgattttacagtaagtgaaaatacag
actagatatgcaacagtcccatgtttcgaccaatcgtcccaagttagact
TAGAGCAGTGTTGACAGTATCTAGTTGTGATAGCTGTGACTGGTTCGACA
TAAAACTGTCAGATTGAAGATGAAATGAATGGCTGAAAagtgaaaaggtc
tatagatAAAATCACATACTATTTTACAAACAAAGCGAATCATATCCATT
CTGGATTTTAGATAGTTATGTTTTTATACCTGCTTTTGCTTTCGATGGTT
TCCATCATTCTCTCCCTCTCATGCCAAGACGAACAAATCCTGCATCTTTA
TCAAAAATGAAGAACTTAGAATGTAGTGATATACGCACGTAAAAGCTAAA
TCACATTTGCGATTTGTAGGATAGACAAATCTTAAACTCCGGTTTATGGG
AAAGGAGCCGTGAAAAGATTTCCAAATAACGGATGGTAAAAGTTGTGCTC
CTGAAATGTCCATTAGACTAGACTAGCAACTTATTTTCATGCTATCTAAG
AAGCTTACTCTCAGGAAAATTTCAGAGTGAAAAAAGTGGCGCCAGACAGC
CAGGCAGTGCCAGATAAGCCAATGGAAGAAACCTTCATAGTTTTTTTAAA
GTAAGTCTTACATTTTCATTTATTAACATTTTATTGATAGTGCAGGAGTG
CAGGTCTGATAGATTTTCTTTCTATCAGGCCCCCATGCAATGcacttttg
ttttctctttctggctgtgtgtGTTTCAACAAGTTTTCaacggtgaaggc
ttcttcataaagacgaaagacatgtatctatttttcggatccggtatgcg
ggaatagtgtcaggacctgcagtcgacctggtagggttgagagtgggtgt
ggtttgggtgtggttacgtatcagattggctaggaattgggttattatca
gttagggttaggctatggttggagctcgaaacaatacgaccctgcctatg
ctccggacagtccggggtttttttgatgcgtgcccggggtccgtattatt
tgtttttgagagactaccccggacgccccagacagcccacgcggtcgctt
tttatagaatcgctgaccgcacgggcttttttctaattcattgaaatatt
cttccgtggacaaacgccgtcttccaaaagatcttgtaatgtcCTGATTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044727-exon-sc0006094-1491911889:668..1867 | TCONS_00044727-exon-sc0006094-1491911889:668..1867 | Clytia hemisphaerica | exon |
| TCONS_00044727-exon-sc0006094-1510915933:668..1867 | TCONS_00044727-exon-sc0006094-1510915933:668..1867 | Clytia hemisphaerica | exon |
| TCONS_00044727-exon-sc0006094-1575043694:668..1867 | TCONS_00044727-exon-sc0006094-1575043694:668..1867 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006094 | supercontig | sc0006094:668..1867 . |
Blast
The following BLAST results are available for this feature:
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