TCONS_00004362 (transcript) - C. hemisphaerica

Overview
NameTCONS_00004362
Unique NameTCONS_00004362
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1720

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00004362 ID=TCONS_00004362|Name=TCONS_00004362|organism=Clytia hemisphaerica|type=transcript|length=1720bp
AAAAAGACATGTAACATGCCGACAACGACTGACGACATTTTGGTTTGGAA
GGAGTTTGAAGAAGACTGGAAGAGGAACAACAACTAGCAATTTCAAATCT
AATGAAAAAGACAACAACATATGAATAGGGAATGTCACTCACTGAAATGA
TTTTTGTTGGTATTTTATGTTCCTTCTTGTCGTTGACAAAGAGTGGTAAA
GTTAAAGTTGTTGATGCACCCTTTTCATTCAACAATCCAATAGGATCAAA
TCCTGGCACCCAAAACCAAGAAAAGAAACTCATTCTTCGATTCAACCCAG
AGAAGCCATCAGggcctCCTTTTTTGATTGAGAAACTAAATGGAAAGTGC
TTTGACCTCATGCATAACAATTACAAATATCAATTTTGCCCTTTCCACAA
CATAACACAAAGGGAACAAACTTATCGCTGGAACTCGTACCATGGAGTAC
TTGGTGTGTGGAAACACTGGACTATTgagaaaagtttgtttacacAAATG
GAAATGCATCATGGAGACGTATGCCATGGAACCCAAGAAAGACAAGTGTT
TGTTGTACTGCAGTGTGgggaagaaaacaaaattttatccgTAACTGAAC
CCGAGACTTGCAAATATAAACTGATATTTAAAACTCCTTATGTATGtcca
aaagatgtttttcatgttcTCCCTGTATTATCAAAGACATCACGCCAGAA
ATGGTCTAAGattgaaaatgatttcaaaaatggaCTGCTTACTAAAATTG
GTTATGACAAGAGAATCAATGCAATCTTATCAGAAGAGGGATTAATTATC
AATGACAGAAAGATTTTGCAACAACAAGCAACTGTCCCTTCTATATTAAC
AGATGACAAAAGACCCGCCCGTCCTAATTCATATGTAGAAACTGGAAATG
GTAAAAACGTAACGGTGAGAGACATCACAAACAGTTTCATTTCAAGGCAC
CAATGTGTTCAGgCTTTCGAAAACTTGTACTCTGAAGTCAGTGATTTGAG
AAATCAACTGAAGTTATATCAAGAATTGGACAAGAATACGAATTCAACGC
AAGACCTCACAAATAAAGATTTCAAGTCGACACGAGCTGAGAAATACAAG
CGAGGCGAATTGGGCGAGAAAGGCCTTCAAAACAACAAGCAAAATGGACg
catttcaaataaaatagaTCTAACAAATACGGAAGACAAAAAAGGTGTGA
ACTCACAAGAAcagtcaaaaacaaaagaagagactATTGAAAATCCTGCC
ACATTACATTCAAAGCAACGAGGTGACGATGGCTTGATTGATGAAGATAA
CAATCCCTTGAGACATTTGCAGGATCGTATACACGAAAAGGAGGAAGTCT
GACAACATTTTGTGAGCGTTTTTTTGTTTCtaatttttaagagttttaca
aaaaaagtttttacaaaaCGCAAGATTGGTCTTCAGGTGAAACCGGTGAA
ACTCATGAGGCTGATGCGCTCATGCTTTATTAAGCAGCTCTTGTGAACCA
GAACAAAACTTGAACGTAGCAATTTATTATTGATTATCCAATTTGTTGAT
AATTATCCTGAGCATAGCAAATGTCTCAACTCTGAAGTTCATTCATCTCT
CAACTACTTAATCACGTTTGGACAGTTTTATGTTTGATGGGCAACCTTTT
AGTTGAGTAGTTAcctaaacaaaatgaaaaatcgcCCGCAAAAACTGCTT
CAAATATTAATGTTACataa
Run BLAST on NCBI

transcript from alignment at sc0000044:209114..222989+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00004362 ID=TCONS_00004362|Name=TCONS_00004362|organism=Clytia hemisphaerica|type=transcript|length=13876bp|location=Sequence derived from alignment at sc0000044:209114..222989+ (Clytia hemisphaerica)
AAAAAGACATGTAACATGCCGACAACGACTGACGACATTTTGGTTTGGAA
GGAGTTTGAAGAAGACTGGAAGAGGAACAACAACTAGCAATTTCAAATCT
AATGAAAAAGACAACAACATATGAATAGGTTAATTCTTTACACGTAACTT
GAATATTGGAAATGCGAGAatctttattttaaatttattatttttcatct
tcttccACTTAGTCTAAGTTAGAGTAGGTGGGGCTGGTTGGCAGACGTGT
TCACGAGCAACTTTTTGAACCCagagaaatatgaaaatattaatttcaga
gaaaaatCCTATTGCTCCtttttttaaaacctttatTCTATCATCTGTGG
TCAAACTTGAAAAATACACATTTTCCgaaaatgatttttgttggGGTGgt
gaaaaaaaacatcaattttaccagacccgatcaatcgaacttatcgaacc
aatcgaacagtcgaactaatcgaactccatctaATTAAtagaacactcac
aatttttgaggcaatagcagttcgattagtcagttagtcacactatagga
aattaagctttcagaaaaaacaacatcagtcatctacaggatacatttca
acaacaaggatgagagttacttgaatcaagttcgcaagacaatattaatt
aaaacttgaaagttggaaacaaaataaaacgtgcagcagccaaaatcaac
caaccaaaatttgtcattcaattcccgagacagtgctttgatttttaagg
ccttgcttatacgctaaagtaaaaacaattccgcacatgtaaatgggtca
ttgtttgaggtccggcgaaatttccgggagatagcctatccagTGGtccg
cggatctaggtgggctCCGCCTCCCCCAGNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNtcaaattttaggcaatttctcaaagtttt
tgaaaatgttaatttcattaaaaagcgccgggttattttttcatgaatcc
ccttagaagttttgcggcgcaattctttgcttgagagtcaagtaaacgat
atagcgctttcgcatcattaatctttgatacgtattttggcgggacgcta
gtgtgactaactgttagtagttcggtcagtaaaaaagttcgattagttcg
atgtgATATTAAGTCCTCGTATCTTCCCTCgtttgcaaaaactttgtcct
ggcacgtGATTGCCATTTCAACAGTTACcagacttaacagcttgacgttt
attgtactcggatatttgtctatccggaataaatTTTGTAGCCCCTCTAT
TGCGATTTCGCGTGCGACCGAGTGGCGGAATAttacgccccaacaaaccg
cctctggcgctaaaaggatacaggaaaagtgtgtaattcGTTAtgggaag
taatttcccgactTACAtcccgaatttggctttgaaaagaagctaatata
tgGTGgtggagcagcacaaacttgtcgaacaaaattggtttatcaaactg
atcgaaccaaaacccattgatcgaacttaatcgaacactcacaatctttt
aaaaaatcttggagTTCGATTAAAACCCTTCCCAAAGACTGGTCGCATGC
ATTTATTGTACCTGTGTACAAAGGGGGTAACAAAGATAAGAACCAGGCTG
AAAATTACCGACCAGCTTCACTCGCATCGATTTGTTGCAAGTGTCTGGAA
TATATTATTTATAGCAATGTAATGACACACCTTAATGATAATAATGTATT
GAGTGACTACCAACATGGTTTCAGAGAAAAACGTTCATGTATGAGTCAAC
TTTTAACCACCGTCAACGACTTTGCTAGGAACCTTAATgataagaaacaa
acagactctATCTTACTGGACTTTAGCAAGGCATTTGACAAAGTTAACTA
CTTCAAAATTTGTCTAAAGGCATCACACTATGTTATTGGAGGCACCACAC
TTAAATGGATAAAAGCATTCCTATCAAACAGAACGCAACAAGTTTTATTA
AACAGGAAATCCTCAGATACGGCTAACGTTTTGTCTGGTGTACCCCAAGG
CACCGTACTTGGACCACTACTCTTCTTGATTTACATCAACGACATGCCAT
CATACAAGATGACCTCACAGCACTTCAGCAATGGGATGTGGAATTtcatc
ctcaaaagtgcaaacaTCTCCCAATTACAAATTGGGACCAAACCCATAGA
AAGCACATATTCTATCCAGAGCTTGAGAAAGTATCTAACGCCAAATACCT
TGGAGTAACCCTGAACAATAAGCTCAAGTGGAACACTCATATTGACACAA
TATGCAAAAAGGCAAATCAAAAGAGATCTTTTCTTCAAAGGAACCTGAGG
AATTGTTCACGTAAAATCAAAGCGAAAGCATTCAATACATATGTTAGACC
TATCCTGTCCTATGCATCTCCAGTGTGGAACCCAGTATCGAAACAAACCT
TATGTGATAATCTTGAAATTGTCCAACGTAAAGGAGCCCGCTCTGTTTTC
TCGAATTGGTCTTGCGATGCTAGTCCTACTAGAATGTTGAATGATCTAGA
ATAGAAAACTTTGGAACACCAAAGAAAAGTTGATTCTGTTGCTGTATTTC
ATGACATAAGATCAGTTGGAAATGCAGAGCATTCTCCCAAAACAAGTTTG
AGTGTTAAATACCAGCCAATACACGACAGAGTAATAGCATACAGAGATTC
TTTTCTGCCCATAACTGTTAAATGGTGGAATGAGTTGCCAAAAGAAGtat
tgaatattgaaaataaaaataaatttaaaaccgAAATTTCGTCTTATTTT
GACAGAAACTAGATCAtatggtaaattttttttccttgtGTATCAGCCTC
TTTTGTGTTTTCTTAATCACTAACACCAGGTTGCCTTGGCCTTAGTTCAA
GCTCGANAAATCATGCTCTATAAAGTGCTAACCAGAAACATTTAGCCCTT
ATTTTGTTGTTAATTACCCCTCTGAGTGAGATTACAAAGAAATGAGTTGC
CTTAAGCCTTATTAAGAATCATTTCACTCATTCTTTTAGAGAAAAAagcc
aattttgagagaaaaatatttttttttgatggtaaggaaattgtactctt
gtctgtaaaatacacatcgTCCCTCACATGAGTAAAGGtttaatctcaaa
attaatacCTTATGAAATTTACagttttactgtggtggtcatctttgaga
ttgagattgcccttttttcatgtagaggaatagtcaatgttttcatatga
cgaaaaggccaatctcaaaggcagaacaggattgcaagatttccaatttc
ccaagacacttattttgagattgaacctttagtcatgtgagGGACGATTT
GtactgcaaaatttttgaaaatttgcacaaacaatGTTTAAGgccttttc
taggagcacataaagttttgGTATATTTTTAAATGTATATTTCTTGGGAT
ATTACTAAAAGCATGATAACATGCCTACAACTGCAGtcaaacctgagaaa
acgaaagtgatttatatctgaagataggaaagttttcagacccaacttcg
tatctcaaaattaatcagtatcaaatttcgGATAGATTGATCTATGATAa
gcctatatttgggttggaagaattttcgtttttgcttacggGGGTCCAAT
GACCAaaaatccaccattatggatacccaggtgagaaatccaggtggtca
agaagcttaaaatattcttattaccacaaggaacaagaaaaaacccaaga
aagttagtccatCAAATGGATAAGATAATTCCTGGCTCGTACCTGTCTAG
TATGGATAATGGGTCCTAGGAACTTTTAATACTTAAGATATAGATAGATG
CTCCCCTTGTGGCATTTACATTTATATAACAATATtttaccgcaattgca
gtacaAACAGAAAACAGGCAGTTTTGTATACATTTTTaaatcatatcttt
ttaatgcaCAGATGtattagctctagtttagacggcacacttttcgccct
gctattctaattgtgaattaaggTGAGCAtaaaagtgggctgtctaaagt
caatgcattgccctcttttgacgtcaacacaatgactttttttaatcttt
tctaAGCAAAGAATTTAACTGCCCACTTTGTGCCCGCTTTGTGCCTAATC
TTACAATTAAAATAGGCAGGGTGAAAAGTGAGcggtctaaactagagctt
agttTTTTCATGGATCAAAttctttcaataaagacaagcttTCCTCTGGT
ACAATTTTTGACaatcaatttttgtttatttttaattgACCAGCTCCTTT
TGTATTTGTTATAACCCTCTTCACTATGAAATAAAAAGTACTGCAATTTT
AGTATGCCACAATTGAGGGAATTCCCTGATTGCTTAATGCCATCCCATGT
GAGATTCTCTCTTTCATAAGAGGGATGATACTGAAAGATGAGAAAAAGCA
TAACCCTTGGgttcacggattgaaacaaaaaaaagatgGTGTTTTTTAAA
TTGTGGTATTTTTAAGGCCATCCGTTGTGCAAATGAATGTCTTCTATTTA
TTATTGTTAAAAACATTCCNGCTCCCCTTGTGGCATTTACATTTATATAA
CAATATtttaccgcaattgcagtacaAACAGAAAACAGGCAGTTTTGTAT
ACATTTTTAAATGATATCTTTTTAATGCACAGATGtattagctctagttt
agaaggcccacttttcgccctgctattctaattgtgaattaaggTGAGCA
taaaagtgggctgtctaaagtcaatgcattgccctcttttgacgtcaaca
caatgactttttttaatcttttctaAGCAAAGAATTTAACTGCCCACTTT
GTGCCCGCTTTGTGCCTAATCTTGCAATTAAAATAGGCAGGGTGAAAAGT
GAGcggtctaaactagagcttagttTTTTCATGGATCAAAttctttcaat
aaagacaagcttTCCTCTGGTACAATTTTTGACaatcaatttttgtttat
ttttaattgACCAGCTCCTTTTGTATTTGTTATAACCCTCTTCACTATGA
AATAAAAAGTACTGCAATTTTAGTATGCCACAATTGAGGGAATTCCCTGA
TTGCTTAATGCCATCCCATGTGAGATTCTCTCTTTCATAAGAGGGATGAT
ACTGAAAGATGAGAAAAAGCATAACCCTTGGgttcacggattgaaacaaa
aaaaagatgGTGTTTTTTAAATTGTGGTATTTTTAAGGCCATCCGTTGTG
CAAATGAATGTCTTCTATTTATTATTGTTAAAAACATTCCTTGTTCGAAA
TTAGTTCTTATTATTGCTTGTGTAAGAGCAATTTCATTGATTGAAAGATA
ATAGAATGTATAGTCATTGCTCAATACAAttctagattttttatttcact
tgTAAGATATCAATATGTTGTAGGTattagattttttagaaattttcttg
AGCACTTTGAGACTTATTCTACtcatttttcttaatcatttTTAGGGAAT
GTCACTCACTGAAATGATTTTTGTTGGTATTTTATGTTCCTGTAAGTGAA
tccaaaacttcattttttcatacagccaaattttttctttaaaaagtata
aaaagtgTGAAGAAAAAACCAATGTAAATGTTACNGAAAACAGGCAGTTT
TGTATACATTTTTaaatcatatctttttaatgcaCAGATGtattagctct
agtttagacggcacacttttcgccctgctattctaattgtgaattaaggT
GAGCAtaaaagtgggctgtctaaagtcaatgcattgccctcttttgacgt
caacacaatgactttttttaatcttttctaAGCAAAGAATTTAACTGCCC
ACTTTGTGCCCGCTTTGTGCCTAATCTTACAATTAAAATAGGCAGGGTGA
AAAGTGAGcggtctaaactagagcttagttTTTTCATGGATCAAAttctt
tcaataaagacaagcttTCCTCTGGTACAATTTTTGACaatcaatttttg
tttatttttaattgACCAGCTCCTTTTGTATTTGTTATAACCCTCTTCAC
TATGAAATAAAAAGTACTGCAATTTTAGTATGCCACAATTGAGGGAATTC
CCTGATTGCTTAATGCCATCCCATGTGAGATTCTCTCTTTCATAAGAGGG
ATGATACTGAAAGATGAGAAAAAGCATAACCCTTGGgttcacggattgaa
acaaaaaaaagatgGTGTTTTTTAAATTGTGGTATTTTTAAGGCCATCCG
TTGTGCAAATGAATGTCTTCTATTTATTATTGTTAAAAACATTCCTTGTT
CGAAATTAGTTCTTATTATTGCTTGTGTAAGAGCAATTTCATTGATTGAA
AGATAATAGAATGTATAGTCATTGCTCAATACAAttctagattttttatt
tcacttgTAAGATATCAATATGTTGTAGGTattagattttttagaaattc
tcTTGAGCACTTTGAGACTTATTCTACtcatttttcttaatcatttTTAG
GGAATGTCACTCACTGAAATGATTTTTGTTGGTATTTTATGTTCCTGTAA
GTGAAtccaaaacttcattttttcatacagccaaattttttctttaaaaa
gtataaaaagtgTGAAGAAAAAACCAATGTAAATGTTACATTTAATGTGA
AAATTacaatatttaaaacaaatgctcatttatatcattttttagTCTTG
TCGTTGACAAAGAGTGGTAAAGTTAAAGTTGTTGATGCACCCTTTTCATT
CAACAATCCAATAGGGTTTGTATTAATACTTTTAAAGAACAAATTGGGCC
ATTACATTTTACAACCTCATAGTATAACATTTCCAGAGGGCATtcagaga
aaaatttccaggggtgttctttcatttttccaaggggatgaaaagttatt
ctaaaatttccagggggtaaaagactgatctTAGTCCGTCCACGCTCGCT
CTAAAGGTATATAAAGGATCTTTCCAAacgtatttttgcaaattttgcca
ttttccagggggtacatattttcaataatttctttatgacttgaaaaggt
ttgtccaTACCCCctgtatgtttttttataatggaacagcccattagAAT
ATGATATAGGtttattttatccttttatCCTAACTACACTGGTGTGATCG
CTGCATGAGGACTGTAGGGTCAATTTCTGACAAAAAAATGCACCTACTTG
ATGCCAAAGAATAGCTTATTAATCTATTTTAaagggataaattttcgcag
gATTTGACTTTTGCAGTTAAGCTGGACTTGATTTTGCAGATCacatcatg
aacatataaacgactggacatctatcttttattgtctctttgaagcgagc
ttcgttgccgcctgtatttcNNtataaaaaatccgacaatattccgtcgt
aattttatttctttgaattgtttaggtaaaatgattgatagagcttgaac
attactcctaatgcacaaaaaaatcattttcaaattttttcacgggtttg
caatatattttatcaacattttcaactctgaaatgcagaatttcaactgc
gtgtatacttttgaatcccttttgtcactccaataattttttttatgatt
tgaaaaaaatagcttgccaaagttgagagcctctGTCATAAGAATGTCGA
Aagtagaatgtgacactctctaaaattattagacacttttaagtcaaaat
ttggaaatattagtcggaattttgacaagctgacgatgattttgcctctg
ttatctttgttatgatacaGATAAAAGACTTTNTGCTTtacatttttcaa
gttttactcaaaaatatttcacggataaggcctttccaaatttccaatta
gatttaattttgcagatttAATCCCcacaaaaatttatcccattaaatta
TCTGAACTTTCCCTGATTTTAGATCAAATCCTGGCACCCAAAACCAAGAA
AAGGTATTAATAATGAATTTTATCAGTTTGACCattgcttcttttttctt
tttcagctcTGCTTCAAGAATTAATACAgcagtgaaaatttcaattgcTT
TTTTGTGGCTGTTATACGGCCACAATActcaattttgaattcatttttaa
aactaaattaTTTGAAGAATGTGTAAGAAGGTGGgcaaaatcaatatttt
cctTGCTTTATTATAAATAATCcttgaaaataaacttttcatACGGCATC
CAAGGGGTCTTGTGACAAATCTCAAGGCTCTTCATTGGTATTGATTAATC
TAAGTGGTTACCAAATTAATTTGTAATTAATTTCTAATCTGAAAAACAGC
CATTGGCAAAAGTGCTTTGAATTTTGCCTGATACAGATAGACAATTGTCC
ATAGTTGTATATTGAGTTTCATGTAGTTGCATTTATTACGAGTTGAATAC
AATATTAATTCAGCCTCACTCAGCTTTATGTTGTTTGAACTCAATATTTT
TCTTGActatgtttttgttgaaagaagacattgcaatgttaaTGTTACAC
GAAataataattttcgaaaattgtttgcaatgtcagcgCTGGCTTCCAAC
GTAATTTGAATATACTAAATAAATTCACTTTGCATTGTATTATTTTCTGT
TTTAGAAACTCATTCTTCGATTCAACCCAGAGAAGCCATCAGGTAAATAA
TAGAGAAAGCTGAAAAAAATGAGAAGTAAGGGAGTTTATTTTACCTAAAG
ATAGGTAGCCACTGTTTTACATATTGTGCTCGGGAGATGCTTACTGTACA
TGGTGAAATCAATCGAACCCGTGAAAAAAACACTCAAATCACACAAAAAG
CACCCGTGTGCCAGACATCCTCACTTGCACGCTAGAGTAATAGTGCACAA
TATTTCTGTATATCAATTGTTGAAGGCAAAGTATGCTCTTTGGCTAGTCT
TACACTATTATATgctatagtttttttttcatttttagggcctCCTTTTT
TGATTGAGAAACTAAATGGAAAGTGCTTTGACCTCATGCATAACAAGTAA
CTAACTTTTTGAATAACAATGATTAGTTACAGGTTGATTTATATATTAAA
TAtgatcattttttaaaaaactgtctGCCAAAGTTGTTTTTTGGTATGAC
TACTGAAGATAGGGTAGACTTTTAGCAAAGTTAGACTggggaaaaaaaga
aacaagtaATTGTGATACTTCCCCATATTTTATGTCATGCTTCATGAACA
GAATCCCAtcattcaattttatttaaagaaaatttagcTCACTTAAATGA
TTTGTCAGTAAAGAATTCCTTActgtcatgtttttttttaagttataaGA
ATGTTAAAGGGAATCTTTCAcagataattattttttcctttttcttataG
TTACAAATATCAATTTTGCCCTTTCCACAACATAACACAAAGGGAACAAA
CTTATCGCTGGAACTCGTACCATGGAGTACTTGGGTAAGCTGTTGATTAA
AAGCTATCATAAAATGACTTAGTAATTACCATTTTAAAAGTTGTCTTATT
ATGTTTAATAACGGGAAAGGGTGCAAATTATGAGTTTTCAAACTTCTTCT
GGCTCAGAGTGATTTCTGTCTTAGTGAAGTAAATAAAGAGGGatttctgt
ctcaaaattctgtataattcgccgaaatttcaatattattatGTCCTAAA
ATTGCTATGTAAAATCCGTTTTCAGTCTCAAAAAACCTTGGTTTGACCAC
TGAATTATAGATAAACATTTTCATGCAATTACTACCATTTTTTCTACATG
CATGTTTAAATTGAATCCACGACCTCTCACTCTATTATTTAaacatttga
tattttattcATTATCAGTGTGTGGAAACACTGGACTATTgagaaaagtt
tgtttacacAAATGGAAATGCATCATGGAGACGTATGCCATGGAACCCAA
GAAAGACAAGTGTTTGTAAGATACAAAAAGTTGTAACCTTGACTTGCTGT
TCTTATAGctgtaataaaatttttgagctTTGGATAAGGTCCGCGAAAGA
TTTCTTGGGGTATAATAAAGTGGATGAAGTTTAAtacacaccccttctca
cagacccgggtAGGATTTTTTCATCCAGTGCGGGTAAAAGTAACAGGCTG
AACATATATGcagattgatattcccatgttttttatggctagTAATTTGA
Attccactgggtctgtgagaaggggtcagttaaaatttaaaaatttgtct
GCTTTCATGGGACACACTCATACATAGTGACCTCCCCCCCCCTGGGAATG
GGTTTTGAGGCCAATAGGACCTGATAGGACGTACatataggggggggggg
atttttttttgaagccagagTGGAGAAAAACGGGGGgatttcattctagg
catggggggggaGAGtccctgaaggacactatgaCACTGTAGTCaaaatc
ttctttcttcttttgctCTTCTCAAAACATGCAAAATATTCAGTTATTTA
AAATACAATATTGATGAACTTTATTTGATTTAATTTCCAGGTTGTACTGC
AGTGTGgggaagaaaacaaaattttatccgTAACTGAACCCGAGACTTGC
AAATATAAACTGATATTTAAAACTCCTTATGTATGtccaaaagatgtttt
tcatgGTAAGATCCCAAACATTGCATTctttttacttgtttttaaaaaat
gtccgggttttttttaataagccaGGGAAAAATTCTTTCACCTACAGTAT
TTTCCTCACTTTTCCCtggccaaaatttccaattcgtcacttttcccaaA
CCGAATTTACAACTTAGTTAGTTACTTCTAACGGattaaaattgtccaaa
tgaaaaagaatgaaattgttttctttgaaaatagatcttgtaattcgatg
TTTaataaagcactaatttcggatAGTAAAGGATTTGGATTTTGATTGGG
GAAAAGTTTTGGTCAGGTGGTAAAAATGTTTaggaaaaatttcgtcaacc
TGTCAAAGTTTTCGTCATTTCCCctcaacatttttttctccGATAAGGTA
TACATGACCAATTATCATCTCAAACATTGCTTgtctcttttcatttttta
gttcTCCCTGTATTATCAAAGACATCACGCCAGAAATGGTCTAAGattga
aaatgatttcaaaaatggaCTGCTTACTAAAATTGGTTATGACAAGAGAA
TCAATGCAATCTTATCAGAAGAGGGATTAATTATCAATGACAGAAAGATT
TTGCAACAACAAGCAACTGTCCCTTCTATATTAACAGGTATCtaaaattg
ggcttttccaaaaaaaattttacccattattattattattattaccccct
ctgttgaggatattgatttttcgaagtatcgaaccccctgccTGGATAtg
ctactttattagtaaagacccactcttaaaaatatgctcaccccctggat
atcctctcttataaaaatgcttacccctggatatcgtattttttacttga
aaagacactttacccgctgggtatccgctcccttgtagatatttaccccc
tggatatccacttttgaacaaaaatcgttaagcccctggatatccgagga
tcaacagggggggggggctatttctggaaaagcccattgtagGTCAGTGT
TGAAAGTAATAACAGCATTCagtctgaaaagaaaatcaaacacACCAAAT
TATCTCAAAATCTTGTGATAACCAATTGTTGCTTGATTCTCGAATAATTC
CCCTTTTAGATGACAAAAGACCCGCCCGTCCTAATTCATATGTAGAAACT
GGAAATGGTAAAAACGTAACGGTGAGAGACATCACAAACAGTTTCATTTC
AAGGCACCAATGTGTTCAGGTCAGTTCCCTCAAAATGTTTCAGACTTTGG
TGCTACAGTTCATATTCTCGATGAACTTGtaagaatttagaaaaaaagct
gaaTCATAACAATTTGAAAGAATCGGCACCTTGTATGTTTTGCGAACAAA
CATTCGAATATTGCTGTCTTGCTGGGTCTTCATGCCGCTTCGGCTTCTTG
TTTGAAtttaaaatcataatttttcttaatatttaggCTTTCGAAAACTT
GTACTCTGAAGTCAGTGATTTGAGAAATCAACTGAAGTTATATCAAGAAT
TGGACAAGAATACGAATTCAACGCAAGACCTCACAAATAAAGATTTCAAG
TCGACACGAGCTGAGAAATACAAGCGAGGCGAATTGGGCGAGAAAGGCCT
TCAAAACAACAAGCAAAATGGACgcatttcaaataaaatagaTCTAACAA
ATACGGAAGACAAAAAAGGTAACCTTCTAAATTGAGAACTTTTGTCCGTC
CCTCTTAGTTCAACTTTTAaaccattatgattttttgaaaagtaaggAAA
TTTTGATAAGAGTTTTCCAATGCATTCACAGTAATTATagtaaaaaacct
ttttcttcaGGAAAAGTGTCGAAAATACAGttaagtctccataactcgaa
cacgcacagggaacacaaatttgttcgaattgaCGAAATTTCGTTATGGA
ATAAGGTTTATCgggtattgttaactgaagggacgagaaaacttgttaaA
GAGAcatgtggttttgtagaggtttgAGATAAAGAGATGCATAAAGATTG
CTTCCGTTGAATGGACTTTGATTTTCGTTTTTACCCTCATCAAATTTCAG
GTGTGAACTCACAAGAAcagtcaaaaacaaaagaagagactATTGAAAAT
CCTGCCACATTACATTCAAAGCAACGAGGTGACGATGGCTTGATTGATGA
AGATAACAATCCCTTGAGACATTTGCAGGATCGTATACACGAAAAGGAGG
AAGTCTGACAACATTTTGTGAGCGTTTTTTTGTTTCtaatttttaagagt
tttacaaaaaaagtttttacaaaaCGCAAGATTGGTCTTCAGGTGAAACC
GGTGAAACTCATGAGGCTGATGCGCTCATGCTTTATTAAGCAGCTCTTGT
GAACCAGAACAAAACTTGAACGTAGCAATTTATTATTGATTATCCAATTT
GTTGATAATTATCCTGAGCATAGCAAATGTCTCAACTCTGAAGTTCATTC
ATCTCTCAACTACTTAATCACGTTTGGACAGTTTTATGTTTGATGGGCAA
CCTTTTAGTTGAGTAGTTAcctaaacaaaatgaaaaatcgcCCGCAAAAA
CTGCTTCAAATATTAATGTTACataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002438XLOC_002438Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00004362-exon-sc0000044-1491911889:209114..209241TCONS_00004362-exon-sc0000044-1491911889:209114..209241Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:209114..209241TCONS_00004362-exon-sc0000044-1510915933:209114..209241Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:209114..209241TCONS_00004362-exon-sc0000044-1575043694:209114..209241Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:216314..216359TCONS_00004362-exon-sc0000044-1491911889:216314..216359Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:216314..216359TCONS_00004362-exon-sc0000044-1510915933:216314..216359Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:216314..216359TCONS_00004362-exon-sc0000044-1575043694:216314..216359Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:216509..216578TCONS_00004362-exon-sc0000044-1491911889:216509..216578Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:216509..216578TCONS_00004362-exon-sc0000044-1510915933:216509..216578Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:216509..216578TCONS_00004362-exon-sc0000044-1575043694:216509..216578Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:217736..217766TCONS_00004362-exon-sc0000044-1491911889:217736..217766Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:217736..217766TCONS_00004362-exon-sc0000044-1510915933:217736..217766Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:217736..217766TCONS_00004362-exon-sc0000044-1575043694:217736..217766Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:218419..218455TCONS_00004362-exon-sc0000044-1491911889:218419..218455Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:218419..218455TCONS_00004362-exon-sc0000044-1510915933:218419..218455Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:218419..218455TCONS_00004362-exon-sc0000044-1575043694:218419..218455Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:218752..218809TCONS_00004362-exon-sc0000044-1491911889:218752..218809Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:218752..218809TCONS_00004362-exon-sc0000044-1510915933:218752..218809Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:218752..218809TCONS_00004362-exon-sc0000044-1575043694:218752..218809Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:219164..219247TCONS_00004362-exon-sc0000044-1491911889:219164..219247Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:219164..219247TCONS_00004362-exon-sc0000044-1510915933:219164..219247Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:219164..219247TCONS_00004362-exon-sc0000044-1575043694:219164..219247Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:219632..219728TCONS_00004362-exon-sc0000044-1491911889:219632..219728Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:219632..219728TCONS_00004362-exon-sc0000044-1510915933:219632..219728Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:219632..219728TCONS_00004362-exon-sc0000044-1575043694:219632..219728Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:220304..220418TCONS_00004362-exon-sc0000044-1491911889:220304..220418Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:220304..220418TCONS_00004362-exon-sc0000044-1510915933:220304..220418Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:220304..220418TCONS_00004362-exon-sc0000044-1575043694:220304..220418Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:220865..221050TCONS_00004362-exon-sc0000044-1491911889:220865..221050Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:220865..221050TCONS_00004362-exon-sc0000044-1510915933:220865..221050Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:220865..221050TCONS_00004362-exon-sc0000044-1575043694:220865..221050Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:221523..221632TCONS_00004362-exon-sc0000044-1491911889:221523..221632Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:221523..221632TCONS_00004362-exon-sc0000044-1510915933:221523..221632Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:221523..221632TCONS_00004362-exon-sc0000044-1575043694:221523..221632Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:221850..222081TCONS_00004362-exon-sc0000044-1491911889:221850..222081Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:221850..222081TCONS_00004362-exon-sc0000044-1510915933:221850..222081Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:221850..222081TCONS_00004362-exon-sc0000044-1575043694:221850..222081Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1491911889:222464..222989TCONS_00004362-exon-sc0000044-1491911889:222464..222989Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1510915933:222464..222989TCONS_00004362-exon-sc0000044-1510915933:222464..222989Clytia hemisphaericaexon
TCONS_00004362-exon-sc0000044-1575043694:222464..222989TCONS_00004362-exon-sc0000044-1575043694:222464..222989Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000044supercontigsc0000044:209114..222989 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.64146	2.56439	3.74846	4.13545	1.56735	1.21352	1.23766	1.46955	0.732076	1.23765	1.09425	0.727135	0.593392	0.656786	0.313314	0.214618	0.317269	0.316158	0.249594	0.404832	0.408626	0.514893	0.538426	0.624122	2.44528	2.27235	0.515124	0.171798	0.351818	0.557584
Blast
[Close]
BLAST of TCONS_00004362 vs. Swiss-Prot (Human)
Match: GNPTG (N-acetylglucosamine-1-phosphotransferase subunit gamma OS=Homo sapiens GN=GNPTG PE=1 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 6.648e-49
Identity = 83/202 (41.09%), Postives = 120/202 (59.41%), Query Frame = 3 
Query:  198 KVKVVDAP--FSFNNPIGSNPGTQNQEKKLILRFNPEKPSGPPFLIEKLNGKCFDLMHNNYKYQFCPFHNITQREQTYRWNSYHGVLGVWKHWTIEKSLFTQMEMHHGDVCHGTQERQVFVVLQCGEENKILSVTEPETCKYKLIFKTPYVCPKDVFHVLPVLSKTSRQKWSKIENDFKNGLLTKIGYDKRINAILSEEGLI 797
            K+KVV+ P  F  NNP         Q  +L  + +P   SGP  L  +L+GKCF L+ + YKY+FCPFHN+TQ EQT+RWN+Y G+LG+W  W I  + FT M M  GD C  ++ RQ  V L CG+ N++  V+EP TC Y L F+TP VC      V P L +  +++W ++E D  + L+T  G++K +  +  + G +
Sbjct:   26 KMKVVEEPNAFGVNNPF------LPQASRLQAKRDPSPVSGPVHLF-RLSGKCFSLVESTYKYEFCPFHNVTQHEQTFRWNAYSGILGIWHEWEIANNTFTGMWMRDGDACR-SRSRQSKVELACGKSNRLAHVSEPSTCVYALTFETPLVCHPHALLVYPTLPEALQRQWDQVEQDLADELITPQGHEKLLRTLFEDAGYL 219
The following BLAST results are available for this feature:
BLAST of TCONS_00004362 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GNPTG6.648e-4941.09N-acetylglucosamine-1-phosphotransferase subunit g... [more]
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