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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044317 ID=TCONS_00044317|Name=TCONS_00044317|organism=Clytia hemisphaerica|type=transcript|length=931bp
gccttggtcaccccagagaaattttcccaaCCACGCCACTGTTCACACCG
ATAGTATCATATCCGCTACACTTTGTTTAGTGCATTATTTCACCCTATAA
AGATGCTAAATTATCGTTTCGCGATGAAGAAGAATCGAATCTCTCTTATG
TTTAGGACACTANCTATAAAGATGCTAAATTATCATTTCGCGATGAAGAA
GAATCAAATCTCTCTTATGTTTAGGACACTCCACGCAAACGTTCATGATG
CAAGCGAAACAAGTTTACCTTCAAGCAGTAAATTTTTATAATACCTAACT
CTGGATTGGTTAGCTTTTCCTGACAGTAATCTTTGACATAATAGCGAGCT
TTAAATAATTGATAATGTCTAATAGTTTGACATCAAGCTTTAAGTTTCGT
GCAaccaaaactaattttattccaaattattatatcaaaaaaatcaattc
catggtcaaaaaaatcaaacagcTGGTATGTGGAGGATTATTTTCCTTGC
GGTTTTTACTGGTTTACTAGTTCTCTTTCATCCCTCAATTATAATATGGT
ATCAGTCAGTTATTATTCTCACTATGCAGTGCTCTTTCATCCCTCAATGT
TGATAATCTTTTTATTCTGTTTCctattatttttctaaaaaatctcagTA
TTTACAACCCTGAACATAAAGAATAATGATAACTAAAGAAAGTTTCAGAT
TCAGCCCGTAATCCGAAATGCTATGCAAATTTTAAcgcttcattttttct
tgcttAGGAACTTAGGTTAAGTATTCGCCTCTatccttcggcttgaaact
caatgaacTCAGCCATATCTTTTGAACAATATGGTATCATCTATTTTGGT
TTCACCATcagaatatttttaattttatttagatgagtgaaaattataat
ttttgaaatataaactGTATATAATGGAATG Run BLAST on NCBI transcript from alignment at sc0005360:8..938 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044317 ID=TCONS_00044317|Name=TCONS_00044317|organism=Clytia hemisphaerica|type=transcript|length=931bp|location=Sequence derived from alignment at sc0005360:8..938 (Clytia hemisphaerica)
CATTCCATTATATACagtttatatttcaaaaattataattttcactcatc
taaataaaattaaaaatattctgATGGTGAAACCAAAATAGATGATACCA
TATTGTTCAAAAGATATGGCTGAgttcattgagtttcaagccgaaggatA
GAGGCGAATACTTAACCTAAGTTCCTaagcaagaaaaaatgaagcgTTAA
AATTTGCATAGCATTTCGGATTACGGGCTGAATCTGAAACTTTCTTTAGT
TATCATTATTCTTTATGTTCAGGGTTGTAAATActgagattttttagaaa
aataatagGAAACAGAATAAAAAGATTATCAACATTGAGGGATGAAAGAG
CACTGCATAGTGAGAATAATAACTGACTGATACCATATTATAATTGAGGG
ATGAAAGAGAACTAGTAAACCAGTAAAAACCGCAAGGAAAATAATCCTCC
ACATACCAgctgtttgatttttttgaccatggaattgatttttttgatat
aataatttggaataaaattagttttggtTGCACGAAACTTAAAGCTTGAT
GTCAAACTATTAGACATTATCAATTATTTAAAGCTCGCTATTATGTCAAA
GATTACTGTCAGGAAAAGCTAACCAATCCAGAGTTAGGTATTATAAAAAT
TTACTGCTTGAAGGTAAACTTGTTTCGCTTGCATCATGAACGTTTGCGTG
GAGTGTCCTAAACATAAGAGAGATTTGATTCTTCTTCATCGCGAAATGAT
AATTTAGCATCTTTATAGNTAGTGTCCTAAACATAAGAGAGATTCGATTC
TTCTTCATCGCGAAACGATAATTTAGCATCTTTATAGGGTGAAATAATGC
ACTAAACAAAGTGTAGCGGATATGATACTATCGGTGTGAACAGTGGCGTG
Gttgggaaaatttctctggggtgaccaaggc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044317-exon-sc0005360-1491911889:8..938 | TCONS_00044317-exon-sc0005360-1491911889:8..938 | Clytia hemisphaerica | exon |
| TCONS_00044317-exon-sc0005360-1510915933:8..938 | TCONS_00044317-exon-sc0005360-1510915933:8..938 | Clytia hemisphaerica | exon |
| TCONS_00044317-exon-sc0005360-1575043694:8..938 | TCONS_00044317-exon-sc0005360-1575043694:8..938 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005360 | supercontig | sc0005360:8..938 . |
Blast
The following BLAST results are available for this feature:
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