|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00004285 ID=TCONS_00004285|Name=TCONS_00004285|organism=Clytia hemisphaerica|type=transcript|length=3224bp
cggcgatggctcagtggatagagcgctggcttccaaatctgaaggtcttt
ctttggtggtggttcgaatcccactcggtgcgataATTaggttggtcgaa
attgatggacaaatgattgacaggtatgaaaactcagtcagaaatgagaa
actaagtctcagaaactcagaaactcagacagtcagaaaagagagagaca
ggatcagagataagaaaataaaaaaaaaacatgagggTACTTTGGGTGAT
CCGATGTAACTCTTTCCTGGGTAAATTGCCTAACCGATGGATAAATTGCC
GAACAGTTAAAAAATGGTAGCCTGAGTAGCGAAAGATTTGAATTGTGGCA
ACTAAGAAATTTTCACACTGGAACAGGAAACACCTTCGCTTCTCAAATTC
GTTTAACATACCTCACGTGACAAGTTGATACAACACATTGACCACTCCCT
GTTAAGTTTgtatcgaaatctgcaacaaaaacaaaagtgatctcttctac
tgattgctttgtATTGTGGCGCTCCTTCGCGgaatgtttatcaaatttca
tcACTTCCTGATCCAGTGGTGATTGCATGTACTGCTACTTGTAAATacca
aaaattactttcaattcATTTTCTCATACAAAGAAGAAAGTTTGCACAAT
CATCATGACAACCATCACATCATGAAAAAGATGGGGTGTGGATACTCAAA
GCTTCTATCAAAACAACACAAGTCTAGTACAAAGCCCTTCGATGAAGATG
CTATGAGAGATAGACATGTTTCAACAGAATCAAAGGAAAATCCATCATCT
CAAGGTCATCAAGATGTCTCCAAAACTAGTAATCACTTTACAATACCAAG
TATTGATGATTTACCACTAAACAAAGATAGTTGCATAACTATGCATGATT
TGTACAATCTTTTAAATGATGGTGCTATGAAAATGTACATTCATGATCCA
TTTAACCTTTTGCTAATTGATGGTAGAGAACTGGATTTATATTCCACGCA
ACATGTCATAACAGCAAAACATCATTCAATCTTTGGATCAGATagcaatt
ttgttttgagactTTCAAATTATGGAATGGTGATTATTTATGGGTCAGAG
CTGCAAGTGAATAAATCGTCAACTGATTCATTGTTAAAATTGCGGGCTGA
AGTACAAGAATATGTAGCAAGTGATGTTTTAGTGTTAGTGGAAGGTTTCG
ATCAATTTCATTTGAACTACCCCTTTCTATGCACTGATAAACTCATAGAA
ACAGTTGCTGATCGAAAAGAGCTGCTGTGTTACCCATCTATGGTATTGGA
TTCTAAGCTTTTTCAAGGGCGAGGTGACCAAGCTACCAATGAGAATATTa
ttgatgttttgaaaattactCACATTGTGAATATCACCTTGGAACATCAA
AAcgcttttccaaaaaaggttAAGTATTTCCGATTGGAACTAGACGATGT
TGGGGAGTCAAACTTATTCGAACATTTCCATAAAACAtctgattttataa
atgaagCACTTTCCACGAAGATTGGTCGAGTATTAGTTCATTGCAACATG
GGTGTTAGCCGAAGCTCTACAATCACTTTAGCTTATCTCATGAAGTACAA
ACAATGGAGTCTGGATCTTGCgttcaaaaccttaaaatccaGAAGATCTT
GCGCTGCGCCTAATGATGGTTTCTTGCAACAGCTCTCTAAGTGGGAAATA
GAGATGCTGGGACAAAAACTCACTGATATCGATTCCCTGTTTTAAGTTTC
TGAAATTCTGAATTGGGTGTAGTTTTGTCCCGTTAAATTCTAGAATTCTA
GTTTAAAACACTTGCATCAGTTTGAAGTACTTGATTAGACTCTTCCTTTT
CCTTTGTTTTATCTTTTGTAGACGTATGGTCAAACCTAGTTTGTGTCGTA
AAGCTGTAGTATTTGATCGGTTTGATtggtttttattaaaattatagTTT
TGATACTTTTTCATATCTATTTAATAGAAAGTTTGTGAATAANGTCTATG
GTATTGGATTCTAAGCTTTTTCAAGGGCGAGGTGACCAAGCTACCAATGA
GAATATTattgatgttttgaaaattactCACATTGTGAATATCACCTTGG
AACATCAAAAcgcttttccaaaaaaggttAAGTATTTCCGATTGGAACTA
GACGATGTTGGGGAGTCAAACTTATTCGAACATTTCCATAAAACAtctga
ttttataaatgaagCACTTTCCACGAAGATTGGTCGAGTATTAGTTCATT
GCAACATGGGTGTTAGCCGAAGCTCTACAATCACTTTAGCTTATCTCATG
AAGTACAAACAATGGAGTCTGGATCTTGCgttcaaaaccttaaaatccaG
AAGATCTTGCGCTGCGCCTAATGATGGTTTCTTGCAACAGCTCTCTAAGT
GGGAAATAGAGATGCTGGGACAAAAACTCACTGATATCGATTCCCTGTTT
TAAGTTTCTGAAATTCTGAATTGGGTGTAGTTTTGTCCCGTTAAATTCTA
GAATTCTAGTTTAAAACACTTGCATCAGTTTGAAGTACTTGATTAGACTC
TTCCTTTTCCTTTGTTTTATCTTTTGTAGACGTATGGTCAAACCTAGTTT
GTGTCGTAAAGCTGTAGTATTTGATCGGTTTGATtggtttttattaaaat
tatagTTTTGATACTTTTTCATATCTATTTAATAGAAAGTTTGTGAATAA
CATTGAAGAATATTTTGTAAGATATAATAGCTATTTATAATGAACATTGT
GgcataatttataatttttagatATTAATGATTTTTGTATATAAAAGAAT
GTTAATTCCTTGACAGGTGATTGTTAGCTCTGGTGAAATATCAACTTCAC
TGAGAAACACTTTTGCTTTGTTGAAGTCATAAAATAATTTACTCTTCACT
CTTTCAAGCAACCAGAGATTTAAAAACATTGGCTTTTGGTttccatttat
ttatttaatagTTTAGATTTATTATTTTCTGGTCTTAAATAGTTTtcaca
aatttttatttgtttgctCTGGGTTAATCTTTCTAGCTTAGCGGGTGTTG
CtcattatttcaatttttaagatattaaattaTTTATAATAGTAGTGAGT
ATATGATTGAAAAGTCTTTTAATCAAATATAACAATCCTTTGGCTTCTAA
TTTAGCTTTCGATGTTATCATTTTagtctttttatttggagcttttCCTT
TTTTAACTGCTCTAGTTTTGACTG Run BLAST on NCBI transcript from alignment at sc0000041:383784..398641- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00004285 ID=TCONS_00004285|Name=TCONS_00004285|organism=Clytia hemisphaerica|type=transcript|length=14858bp|location=Sequence derived from alignment at sc0000041:383784..398641- (Clytia hemisphaerica)
CGGCGATGGCTCAGTGGATAGAGCGCTGGCTTCCAAATCTGAAGGTCTTT
CTTTGGTGGTGGTTCGAATCCCACTCGGTGCGATAATTAGGTTGGTCGAA
ATTGATGGACAAATGATTGACAGGTATGAAAACTCAGTCAGAAATGAGAA
ACTAAGTCTCAGAAACTCAGAAACTCAGACAGTCAGAAAAGAGAGAGACA
GGATCAGAGATAAGAAAATAAAAAAAAAACATGAGGGTACTTTGGGTGAT
CCGATGTAACTCTTTCCTGGGTAAATTGCCTAACCGATGGATAAATTGCC
GAACAGTTAAAAAATGGTAGCCTGAGTAGCGAAAGATTTGAATTGTGGCA
ACTAAGAAATTTTCACACTGGAACAGGAAACACCTTCGCTTCTCAAATTC
GTTTAACATACCTCACGTAATTATATGTTGTTATTTTCTAACCCTTCTAA
CTATGAAAACCCAGCCTTGATTGTTTTTTTTCACAGCAATCCATTTTACA
AAGGTTCCCACTGATCTCACCACCAGTCTGGAAAGGAGGGAAATGTTACG
CCGGAGCTGCGCCAACCTAACTGGGAAAAGTTGAGGGCAGCAGATCTCAA
ACCTCAAATCTACGCCGGAGATATCCGGCGCACAAGCCGCAATGTCCAGA
CTGGTCTCACCACTTTTTATTTTCCACACACACACATTTTATTTGGATGT
CAACGCAACAACCCAATCCTGCTGATGCTGTTGCCCCGGACACCGGGGAT
TTCCTTGTTGCATTCAGGGGATGTACTTTAACATTGGCTGATCACATGGG
CGTCAATTTTGGCATCACTTTTCCAACTGCTTTCACACAAACTTAGACTT
AGTCAACCTCACATCACACGACGTCTGCCCCCCCCCAATAAATGGCATAC
CATTTAACTTGCATGCGATATGTGGTGAGCACAGTGCACAGAATCCGGCT
GCCCCACGATTCACTTACCGTCAACTGCTCCAACTACGACCCTGCCTATG
CGCCGGACAGTCCGGGGTTTTTTTGATGCGTGCCCGGGTATGGCGCGCCA
AAAGGCTTTTTAATACTAACTTTTTTTTATAATACCAACTTTTTTTTATA
ATACCAACTTTTTTTTATAATATCAACTTTTTTTTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNACCCGGGGTCCGTATTATTTGTTTTTGA
GAGACTACCCCGGACGCCCCAGACAGCCCGCGCGGTCGCTTTTTATAGAA
TCGCTGACCGCGCGGGCTCGGCGATATACGTCCGGGGTAAATTTATGGCG
CAAAAATTGGAGCCCCGGACATAGGTCCGGGGAAAAAGTTATTCTTTTCA
GACCCCAGACATTTGCCCCGGGGCATAGGCAGGGTCGTCTCCAACTTGGG
ACTATCTTACGCAACATGGGACGGCCATTTCCACCGCCATTTCATTCACC
GAACCTCCAACAGAGTGTAGAAGGTGGCATGTATCCTAGGGTGGGTGGGT
GTTTGAGAAAAAAATTTGTCATGTACTACCTGTGTACTATAATTGGGGTT
TTGGGTCCAAAATCGATTTTGATTTTTACTACCTGTGTACCAGGGGGAGG
GGGGTGAAGCAGTTAGTACAAGACATCATGCCTACTAACTGCTTTCTCGG
AAGAACTTAGTAACACCACCACCTTGGTACACTTAGTACAGTTAGTACTA
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGTTAGTACCAAAATTTGGC
AAATTTTTAGCAGGGGACCACCCTTTTTTGCAGTTAGTACATCTGAGTAC
TAAGTGACTTTATCCAATTCATATGGCACACTACCACGGTACTAACCGGC
ATGATGTCTTGTAGTAACTGCTTCACCCCCCCCCCTGTGTGTACCAAAAT
AGGAGTGTTGAGTCCAAAATTGATGTTAACAGTATGGGGTCCAAAATCGA
TTTTGATTTTTACTACCTGTGTACCAAAATAGGGGTGTTGAGTCCAAAAT
CGATGTTAACAGTATGGAAACAAAAAGGTTCAGAAATTATCTGCTAAAAT
ATAAATGTAAAGTTGCTCTATTATAAATTGATCAAGCCAAGTTTGTCCAA
GATCATTCTTCCAAACTTCTTGGAATGAATTGAAATCCTACCAGATCCCA
CTGAAATGAAGGTTTATTGAGCAGTGCGTCACAAACAGCCATATAAACAA
AACTCAACATTCTCACAAAAGTTGTCTTTTTGATTTCCCAAACATTCGTC
TCAAGCGTTCATTTCCACAATAATTTATGTAATTGCAATTTTGGTCAGTC
CACAGTCGGCTTCAACATATACATGTGTTTTTATTTACGTGACCGGAGTG
CTTACTAAAACAATCCGGGGGTAAATGGCGAAGCAACACAGCAGATTATT
CGTAAAGTAAAGAAATATCTTTTGGCATTGACAATCAAATATAATATATT
ATACTATATTTCCTTAATTCAAAAATCAAAAATTCATTTTTCATTCCTAA
AAAATAAAAATAAAAGAATAATGAATTAATATTACATACTAAGACGCCCC
CGTCTTTTACTCTTGTTTAATTTCCGATCTCGGAACGTGCAAAATGCCCG
TCCGCCCAATATCCACCCAATCAGCTTAAGTTCACTATAATTGTCCTTCG
ACATTCAAAAAATGGTATTTAAAAATTATGAATTTATAATAATTACAAAA
AACTAAAAGTTTGATACTTCATTAGTGAAATATTCAATAAATTTCTAGTT
TCAATTTTCAGTGGGTGTTCTTCTAGGGCTTCGTTTATCGCGCAATTTTT
GCGTCACACAAACTTTCTCGGCCGCTTGTCATAATTATGCATTGCCAAAT
TTGGTTCTCCATTGTCAAGTCAGGATCGATGGTGACGTCACCTAAGCATA
AAAAAGAAAGGATTTCATCATTTTTATGCATATATTAATTTACAAGATAT
TCTATTCGCCGCGCGAGCGCACTTTTCGTAGACTAGTCGGAATACTTTCT
GTTACTCGTGGGATTGATGGTAACTTTTCATCTTCGTTATTTTTAAAATG
AAGCACAACCGAAAAAAAAGGAAACTTCAGAAAGTTGCGTATTTCCAGTG
AGTAAACGATTCTGACAATTAACAAAATTGATGATGATGATTTTTTTCGG
TCAGGCAAATGTCTCGTATGGGGGTTCTAGTCTTGACCCCTAAGCCTACG
CGAGATTGAAGCGTTTGGGTAAACGAGTCAAAACTCCAAAAAAGCTGGTG
TTTTGAAGCGCTTCCGTGCTATCGAAATATCGCTGTTTGTGACGCACTGT
TGAGTCAATGTATTAAACATTCGAACATTCAAATTCGAACATTCGAACAT
CAGAGGTGCAAACTCTCACCCATGGGGTGTGAGACTCATGTATTTCCACA
TGGTCTCACGCAATTTTTGAAAAGTTTGATTTCTCACGCATTTTGGATTT
TTGAGAAAAATTTTCCGATTTTTGGAAAACGTTTTCTCGATTTCCCGAGT
TTCCAAAAAAAAGTTTCCCTGATTTCCCGATTTTTGTAAAAATGTTTACC
TGATTTTCCGATTTTTTCCAGGTAGTACCCAGTAGTAAATGGGGGTATGG
GGTGGTTTTGGTTTTTTTCCAGGGACTTCCTGGTAGTAAATAGGGGGTAT
GGGGTGGTTTTGGGATTTTTCCATGTAGTATGGTGTACTTCAGGGGTGGG
TGGGTGTAAAGTTTTGAAAAATACCTTGTAGTACACATACATGCTGCCTT
CTAGTACACTGACCCCCTACCTCCAAAGTCATTTGATTTGAGTTTAATGA
ACCGCGTACATGGTATCAGCCCCCCCAGAAATCTGAAGGGCACCTAGGCC
AGGTTAGTAGAGGGGGCTAATGCCTTGCAATTCTTTGGGGTTACCTATTC
ATTAAGAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCATCTTTATAGCATAACAACAAAGCTTAT
TAGCAGGCGTTCATGCGTGAGCATGATTTTAGGAATGACAAAAGAACAAA
AAGTGTCAATTCAAAGAAATTTATCTGCTGAATAGGGGGTACCTAACTCA
AAGCAATTTTTCAAGGGGACCTAACTCGTTGGGGGCACCATGCTTCATGG
GGGCACCTGAAAAGTGGGCTGAAACCATGGCGTATTAAAAAATGCACGAT
TTCTCTTTCGATTTTACAGTAAATGATAATACAGACCAGATATCAACAAG
TCCCATGTTGCGTACGCTCGTCCCAAGTTGGAGCAGTTGACGGTATCTGG
CCATGCGGTTGAAAGTCCAGGGATAGAAGAATTTGTTTCATTCCCCTGAA
CATTTGCCCCATATTGGCCGGGGCATGCATTGGTGTAGGAGGGCCAGTTT
TCAGAGCATGTCATGGTTGCCCCAAAGGAAAATTTCCAACATTAAAACTC
TGCCCCTAAGATCCGCTTCCCACCACATAAAAAGCCAGAAAAACAGGTAA
ATATAGCCAGTTTTCAATGATTTTGCCCCTGAACTGTGTATATTATTATC
AACATTTTGCCCCTGCCCTTGAAGAGGCCCCCCAGCAGACCCTCAATTCA
CGCAATCGCGCAATTCTTTTTCAAAATTCACGCATTCACTCAAATTTTCC
TCAAGTTTCACGCAATAACCCGATTTTTCAGTAATTGGAAAAATTTTTGG
GAAAAATCGGGGAAACATTGGAAAATCAGGAAAACTGCACATAGTAATTG
GTGGAAAAAAGGGAAAATTCACGTACCTTATTGGTATTATATTTTGCGTG
TTACAAAATTTCGCGGATATATACTGTATTTATTTCGCAATTTTTTTAGG
CCAAATTTTGCCAAATTTAATACCGTTTAAATTTTTCAACAATAAAAAAT
CGTGAAATTAAAAATACACACGAAAAATTTTCAAATAGGTCGAAAATCGA
AAATACTTATTTGTTACACTTAGTTACTATTTTTGTCAATAGTTTTGTTA
CTATATTTGGTATGTTTACACCTACGTTGTGTTTCAAGCGAAATAAGTCA
TTTTCTTGCCTTATTCCCACTTTTTGAGAATATGCCCAATTTAAATTTAA
TACACAAGAAAATTTCCAGAAACTGGCAATCGCAAAATTTAGTACACGCG
AAAAACGTTTCCTCGAAAAAATTTCACGAATCGCGAAATTTTGTAACACG
CGAAATATGATACCAATAAGGTATTCAAAATAGCCCAGATTCACGCATTC
ACGCAAGTTTTTTCAATTCACGTATTCACGCATTTCTTTTTCAATTTTCA
CGCATTCGCGCAACCGAAAATGCCCATTCACGCAACCGAAAATGCCCATT
CACGCAACCGAAAATGCCCATTCACGCAACCGAAAATGCCCATTCACGCA
ATCACGCAAACAGCTAGGGGGGCCCCTTAAAAAAAGGAGCAGTCTCTGCC
CTTGAGATCTCAATGATTTCTGCCATACTCTGAAAACTGGTAGGAGGGGA
GTGTAGGCAGGTGTGTAGGGGTCGTTATTGTCCTCTCAAGAGATTAATAC
CATAAACTGCTCTAACTTGGGACTATCTGACAAAACATGGGACGGCAATT
CGGCCACCATTTCACCAAACCTCCAAAGTCATTTTATTTGAGTTAATGAA
CGACATATTAAAAAATACACAATTTCTCTTTTGCACCGAGTAGGCTTTTA
AATCGAAATATGAAAAAAATCCGTAGTGGAACACACGCAAGTGTCTGTGC
ACTCTAAGAGGAACGAAGAAGTATGATTGATAAACTTGGTGGAGTTATCA
AAACAAATTTGTTGTCAAAGAGATTTAACAGTAAGTGAAAATACAGACCA
GATATCAGCCAGTCCCATGTTTCGACCAATCGTCCCAAGTTAGAGCAGTT
GACGGTAGTTGACTATGTTCCATTGGTTCGATTGATTTTCAATAACATTC
GATTTTGTTTGATTGAGATTATGTTCGATGAGTTTGATTGCGATTAAATT
AAATTAGATCACTCCTTTAAAGCTTTTTAGAGTGGGCGGCCGAGCGCTTA
AGTATCGCACGAAAGCAAATAAAATCCAAATCAATCGAACATAATTGAAT
ACAATCGAACGTAATTGAAGCAATCGAACGGCAAATCCTGGGTAATAATC
GATTGCGATTCGATTGTGTTTGACAATCGAATTGCAATTATTCGATTGGG
TTCAATTGCGTTCAATTGATTCAGCGTTCAATTCATTCGATTGACACCGT
CTGGAGACAGTAGTGCACTCTTGCACTCTCTTGGTGGCAGTGTATCCATC
ATACGTGCTGCTGATATGTGGGGTCTTCCTTGCTACTTTGCAGACCAGTA
CTGAATGATCTTTATTTGAACTCAATTTTTTGTAAAAAAATTACAGTATC
CAGGCGATTACTTAATCAAACAGAATTGACAATCGAACCAAATCAAATGC
AGTTAGTCTCCATCAGGATTAGAAACTAGGCTAGTCTTATATACCTCTTT
TATTTTAGGCGATTACTTAATCAAACAGAATTGACAATCGAACCAAATCA
AATGCAGTTAGTCTCCATCAGGATTAGAAACTAGGCTAGTCTTATATACC
TCTTTTATTTTTTCCTTTGCAACAATACAAGGTGACAAGTTGATACAACA
CATTGACCACTCCCTGTTAAGTTTGTATCGAAATCTGCAACAAAAACAAA
AGTGATCTCTTCTACTGATTGCTTTGTATTGTGGCGCTCCTTCGCGGAAT
GTTTATCAAATTTCATCACTTCCTGATCCAGTGGTGATTGCATGTACTGC
TACTTGTAAATACCAAAAATTACTTTCAATTCATTTTCTCATACAAAGAA
GAAAGTTTGCACAATCATCATGACAACCATCACATCATGAAAAAGATGGG
GTGTGGATACTCAAAGCTTCTATCAAAACAACACAAGTCTAGTACAAAGC
CCTTCGATGAAGATGCTATGAGAGATAGACATGTTTCAACAGAATCAAAG
GAAAATCCATCATCTCAAGGTATTATTTTGTTCACTATTTTGTTTTGTTC
AAATGTATCCGATGACAAAAATTTCAACTTAAACAGTAGCTTCATTTTTT
CTGTCTTATCTATCAATTTGCTACTTCTACATTTTAAATTTTCTCTCTGA
TATAAGATTAAGGATGACTTTACTTTCAAGAATCTGAATTTTTTATGAGA
CAAAGAGTAGTTTAAAATTTTGAAATGCTATGCTTTCTTTAGAGACATAG
GTTAAATTTGAAGTAAACATACCATTTTTAATAAACTTTAAAATGGGAAG
ATGTTCGAAAATTTAATGAATTTATTTAATGTTTTCAGGTCATCAAGATG
TCTCCAAAACTAGTAATCACTTTACAATACCAAGTATTGATGATTTACCA
CTAAACAAAGATAGTTGCATAACTATGCATGATTTGTACAATCTTTTAAA
TGATGGTGCTATGAAAATGTACATTCATGATCCATTTAACCTTTTGCTAA
TTGATGGTAGAGAACTGGATTTATATTCCACGCAACATGTCATAACAGCA
AAACATCATTCAATCTTTGGATCAGATAGCAATTTTGTTTTGAGACTTTC
AAATTATGGAATGGTGATTATTTATGGGTCAGAGCTGCAAGTGAATAAAT
CGTCAACTGATTCATTGTTAAAATTGCGGGCTGAAGTACAAGAATATGTA
GCAAGTGATGTTTTAGTGTTAGTGGAAGGTTTCGATCAATTTCATTTGAA
CTACCCCTTTCTATGCACTGATAAACTCATAGAAACAGTTGCTGATCGAA
AAGAGCTGCTGTGTTACCCATCTATGGTATTGGATTCTAAGCTTTTTCAA
GGGCGAGGTGACCAAGCTACCAATGAGAATATTATTGATGTTTTGAAAAT
TACTCACATTGTGAATATCACCTTGGAACATCAAAACGCTTTTCCAAAAA
AGGTTAAGTATTTCCGATTGGAACTAGACGATGTTGGGGAGTCAAACTTA
TTCGAACATTTCCATAAAACATCTGATTTTATAAATGAAGCACTTTCCAC
GAAGATTGGTCGAGTATTAGTTCATTGCAACATGGGTGTTAGCCGAAGCT
CTACAATCACTTTAGCTTATCTCATGAAGTACAAACAATGGAGTCTGGAT
CTTGCGTTCAAAACCTTAAAATCCAGAAGATCTTGCGCTGCGCCTAATGA
TGGTTTCTTGCAACAGCTCTCTAAGTGGGAAATAGAGATGCTGGGACAAA
AACTCACTGATATCGATTCCCTGTTTTAAGTTTCTGAAATTCTGAATTGG
GTGTAGTTTTGTCCCGTTAAATTCTAGAATTCTAGTTTAAAACACTTGCA
TCAGTTTGAAGTACTTGATTAGACTCTTCCTTTTCCTTTGTTTTATCTTT
TGTAGACGTATGGTCAAACCTAGTTTGTGTCGTAAAGCTGTAGTATTTGA
TCGGTTTGATTGGTTTTTATTAAAATTATAGTTTTGATACTTTTTCATAT
CTATTTAATAGAAAGTTTGTGAATAANGTCTATGGTATTGGATTCTAAGC
TTTTTCAAGGGCGAGGTGACCAAGCTACCAATGAGAATATTATTGATGTT
TTGAAAATTACTCACATTGTGAATATCACCTTGGAACATCAAAACGCTTT
TCCAAAAAAGGTTAAGTATTTCCGATTGGAACTAGACGATGTTGGGGAGT
CAAACTTATTCGAACATTTCCATAAAACATCTGATTTTATAAATGAAGCA
CTTTCCACGAAGATTGGTCGAGTATTAGTTCATTGCAACATGGGTGTTAG
CCGAAGCTCTACAATCACTTTAGCTTATCTCATGAAGTACAAACAATGGA
GTCTGGATCTTGCGTTCAAAACCTTAAAATCCAGAAGATCTTGCGCTGCG
CCTAATGATGGTTTCTTGCAACAGCTCTCTAAGTGGGAAATAGAGATGCT
GGGACAAAAACTCACTGATATCGATTCCCTGTTTTAAGTTTCTGAAATTC
TGAATTGGGTGTAGTTTTGTCCCGTTAAATTCTAGAATTCTAGTTTAAAA
CACTTGCATCAGTTTGAAGTACTTGATTAGACTCTTCCTTTTCCTTTGTT
TTATCTTTTGTAGACGTATGGTCAAACCTAGTTTGTGTCGTAAAGCTGTA
GTATTTGATCGGTTTGATTGGTTTTTATTAAAATTATAGTTTTGATACTT
TTTCATATCTATTTAATAGAAAGTTTGTGAATAACATTGAAGAATATTTT
GTAAGATATAATAGCTATTTATAATGAACATTGTGGCATAATTTATAATT
TTTAGATATTAATGATTTTTGTATATAAAAGAATGTTAATTCCTTGACAG
GTGATTGTTAGCTCTGGTGAAATATCAACTTCACTGAGAAACACTTTTGC
TTTGTTGAAGTCATAAAATAATTTACTCTTCACTCTTTCAAGCAACCAGA
GATTTAAAAACATTGGCTTTTGGTTTCCATTTATTTATTTAATAGTTTAG
ATTTATTATTTTCTGGTCTTAAATAGTTTTCACAAATTTTTATTTGTTTG
CTCTGGGTTAATCTTTCTAGCTTAGCGGGTGTTGCTCATTATTTCAATTT
TTAAGATATTAAATTATTTATAATAGTAGTGAGTATATGATTGAAAAGTC
TTTTAATCAAATATAACAATCCTTTGGCTTCTAATTTAGCTTTCGATGTT
ATCATTTTAGTCTTTTTATTTGGAGCTTTTCCTTTTTTAACTGCTCTAGT
TTTGACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00004285-exon-sc0000041-1575043694:398226..398641 | TCONS_00004285-exon-sc0000041-1575043694:398226..398641 | Clytia hemisphaerica | exon |
| TCONS_00004285-exon-sc0000041-1575043694:386523..386910 | TCONS_00004285-exon-sc0000041-1575043694:386523..386910 | Clytia hemisphaerica | exon |
| TCONS_00004285-exon-sc0000041-1575043694:383784..386203 | TCONS_00004285-exon-sc0000041-1575043694:383784..386203 | Clytia hemisphaerica | exon |
| TCONS_00004285-exon-sc0000041-1510915933:398226..398641 | TCONS_00004285-exon-sc0000041-1510915933:398226..398641 | Clytia hemisphaerica | exon |
| TCONS_00004285-exon-sc0000041-1510915933:386523..386910 | TCONS_00004285-exon-sc0000041-1510915933:386523..386910 | Clytia hemisphaerica | exon |
| TCONS_00004285-exon-sc0000041-1510915933:383784..386203 | TCONS_00004285-exon-sc0000041-1510915933:383784..386203 | Clytia hemisphaerica | exon |
| TCONS_00004285-exon-sc0000041-1491911889:398226..398641 | TCONS_00004285-exon-sc0000041-1491911889:398226..398641 | Clytia hemisphaerica | exon |
| TCONS_00004285-exon-sc0000041-1491911889:386523..386910 | TCONS_00004285-exon-sc0000041-1491911889:386523..386910 | Clytia hemisphaerica | exon |
| TCONS_00004285-exon-sc0000041-1491911889:383784..386203 | TCONS_00004285-exon-sc0000041-1491911889:383784..386203 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000041 | supercontig | sc0000041:383784..398641 - |
Blast
BLAST of TCONS_00004285 vs. Swiss-Prot (Human)
Match: DUS1 (Dual specificity protein phosphatase 1 OS=Homo sapiens GN=DUSP1 PE=1 SV=3) HSP 1 Score: 101.679 bits (252), Expect = 1.040e-22 Identity = 74/257 (28.79%), Postives = 125/257 (48.64%), Query Frame = 3
Query: 1134 LKLRAEVQEYVASDVLVLVEGFDQFHLNYPFLCTDK---------LIETVADRKELLCY-----------PSMVLDSKLFQGRGDQATNENIIDVLKITHIVNITLEHQNAFPKKVKYFRLELDDVGESNLFEHFHKTSDFINEALSTKIGRVLVHCNMGVSRSSTITLAYLMKYKQWSLDLAFKTLKSRRSCAAPNDGFLQQLSKWEIEMLG---------QKLTDIDSLF*VSEILNWV*FCPVKF*NSSLKHLH 1817
L A +E A+ V L G++ F + P LC+ + L +V D E C P +L L+ G A+ ++++D L IT ++N++ N F +Y + ++D ++++ F++ DFI +++ GRV VHC G+SRS+TI LAYLM+ + LD AF+ +K RRS +PN F+ QL ++E ++L + +D + + N+ PV NS+L +L
Sbjct: 104 LAAGALCREARAAQVFFLKGGYEAFSASCPELCSKQSTPMGLSLPLSTSVPDSAESGCSSCSTPLYDQGGPVEILP-FLYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFI-DSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGTSTTTVFNFPVSIPVHSTNSALSYLQ 358 HSP 2 Score: 93.9745 bits (232), Expect = 2.955e-20 Identity = 56/179 (31.28%), Postives = 98/179 (54.75%), Query Frame = 3
Query: 2016 LFQGRGDQATNENIIDVLKITHIVNITLEHQNAFPKKVKYFRLELDDVGESNLFEHFHKTSDFINEALSTKIGRVLVHCNMGVSRSSTITLAYLMKYKQWSLDLAFKTLKSRRSCAAPNDGFLQQLSKWEIEMLG---------QKLTDIDSLF*VSEILNWV*FCPVKF*NSSLKHLH 2525
L+ G A+ ++++D L IT ++N++ N F +Y + ++D ++++ F++ DFI +++ GRV VHC G+SRS+TI LAYLM+ + LD AF+ +K RRS +PN F+ QL ++E ++L + +D + + N+ PV NS+L +L
Sbjct: 181 LYLGSAYHASRKDMLDALGITALINVSANCPNHFEGHYQYKSIPVEDNHKADISSWFNEAIDFI-DSIKNAGGRVFVHCQAGISRSATICLAYLMRTNRVKLDEAFEFVKQRRSIISPNFSFMGQLLQFESQVLAPHCSAEAGSPAMAVLDRGTSTTTVFNFPVSIPVHSTNSALSYLQ 358
The following BLAST results are available for this feature:
|
