TCONS_00004230 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00004230
Unique Name	TCONS_00004230
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3155

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000041:285921..290113+
coding sequence from alignment at sc0000041:285921..290113+

transcript sequence

>TCONS_00004230 ID=TCONS_00004230|Name=TCONS_00004230|organism=Clytia hemisphaerica|type=transcript|length=3155bp
GTAGATAACACTTTCTTCCACTTACTTCAAACATACAAGAGAGAAGGGAG
ACTTTTTAATTTAAGAAATTGAAGTTTTTAACAAACTGTGAACCTTCTTT
TTAGTTATCATTACTACATCATCAAAAAAGGGGTAGAgattaaaaaagat
ttcattacaGAGATATATATTTATGAAGGAGATGATTTTTATGGTTTGAT
ATCATATCAATATTATTACaaactacaaaaaaaatttgagagaAAGATGC
GTTTCTTGCTACTACTGAGGAGGTTGATATTCGGTCGAAGTTTAAAACAA
TGGATAGTACCTACTGGTGTTTTCTTCGCGGCAGTCTACATTATACTCTT
CTCCACGACTGATGGAAGGACTAACTCCTTCTCCAAGAAACTGGCACATT
ATTTTATGGACGATGGGAAACAATTTATAAGCAAGGAATATTGTAATCCG
ACAAGCATCAAAAGACGTACACATATCACTAATCGGACCAACATAGCTTG
TAAACCACATATTGCATCAGAGACTGCGTGTAACCTAGCACAAGAGCTTT
ATACAACCAATCCTAAATTACAGACTTGTGGTTATTCAAGACCAGTGGAG
ATTTGTACTTTTGAAGATAGTTCTTCTTCCAGCACTCGAATATCTTACAA
ATGTTCCGTCAaagattgtttaaaatatgAACGCAATAATATTTTAGTTT
GGTCCGTATCGAAAGATTCAGGAGAGTTGCGACAAAATGAATACTTTACT
GATGAAGAagactttcaaaattcaatcaaCAATATTGTAAATGACGCACA
GAAAGCAGGCTTCACATTCTTGCTCTTCGAGTGTACTGATGAGAGAACGT
ACCAACGACCTAACCATGATTTCATCGGTCAGATGTTCTTGATTCCACCT
TTACCTATGAAGAAATACAATCAACCAGAGAATGACCAGAAAATCAACAT
CAATATGTTAATGATCGATTCCGCCGCTAGATCGCATTTCTACCGATCGC
TACCAAGGACCATATCCACTTTCAGTACGATTAACAAATATCGCCATGTC
AAAGCAGAAGTCTTAGATTTTGAGCTCTTCCAATCGATAGAAGGGCATAC
GGCAGAGAATTTGCACGGTTTGTTCACAGGGAAGCTTTTCCCCAAGTCTT
TCACGGGTGCCGATCGAGAGCGTTCTGCGATCGGCGTCGGTGACTTCATG
AAGTTGTTCAAAGAAAAAGGTTATAAGACTGTCTACCAGGATGACTTGTG
CTTCAATGAGTTTTGGGGAATGCGACTGGATTTAGGCTCGCCTGACAACT
ggattgattttcaaaaagcaaTCACTGAAAACAGTATTGAAAGCACAGga
TTAACACAATCAAGTTGCAAAATCCTTTCTATCAACAACGTTAGTACACC
ATTCAATGGACCGGATGGACCTCTTTGCTTCAACGGTAGATTCACAGCTA
ACCAATACTTAGATTATACGCATCTTCATCACGAGTTCGCTGGTCGACAA
AACCAGAAACTCCTCACATTCTCTACAATCTGCGTTGCACATGAACACAC
TGGTACACGTCTTCAATCCATAGATGCCGACCTTGCAATGTACGCCCGCA
AGATGGCGGAAATTGATAACACCATTACTATGATATTCGCTGATCATGGA
AACACCTATACTCACTACACGCATGCTGTGATGGAAGGGCGTTTCGAACA
ATTCCACCCTTCTTTGTTCATGATCATACCGAATGGCGTTAAAGAGAAAT
TAGGAAAACAAATCACGGCAAATTTACGCGAGAACCAATACAGATTATTT
ACTTTACTCGATCTTAGAGAAGCTTTCATAAATATCCCCGAATCACCAAA
ACCAGTCGGTTTGTTTGGACACATCTCAAACAGTCGAACTTGCGATGATC
TAGATTTACGGCTACCGAACTTATGCGTTTGTGAAGGTTGGGACGCCGAG
GTGAAGAACGACACCAACCAGATGGGGATTCTACATTTCGCAGCCGGGCA
ACTCAATAACAAGATACAAGATCAACAACTTGAAATCCGTACCCAAGCAC
TCGTTCCAAAATGCCAAATGTTACGACCAACTTCTTTTTATAACGTTCGT
GAAAGAAATAAGGGAGGCAAAATGATCACTAGCCTGGATTTTACAACATT
ATCAGGAAACGGGGCTAGTGGTTCGCATGATGTTTTCCACGTTGAAATTG
AATCAGAGATTGATCGTAACCTCCCGTCACGAAACATGAAATTGTTAAAC
TTTGATCGCATTTCGAAATATGGGCCATACCGCGCATGCGCTGATCAGGA
GGTTGACGTAAGGCTGTGTGTTTGTGATATCCAAAAGGCGACTCCTGTCC
GAAACATTGAAGATGTGGTCGCTTATGAGATTGGATTTCGTTTTCCAAGG
TTAATCGAGCCGGTTGATATTTCCATCGTTAAAAACAGCCGAATTTCACG
ATGTTTATATCTCCGGAAGATCTCTTATCCGGAAGTGACTTCTGAAAGCA
AAACAAGTATCTATTCTATCACATACGAAGTAGCAAATGTTtgcaaaacg
aaagtgaaagccaTTTTAAACATTGAACTAGACAATTTGAAGTCTTCGAC
GGCCGGTCCGTTTGAAGTAAAACTGGCTCCTTTCACAACCAAATTCTTGG
TGACTGCAATTCGTGATACTCCATATTGGGATTCGACAATTTCTTCAGAA
GCTATCCAAGGTGAACCTTTGTTATAATTTTTgtctaatttgaattttta
tcgaATTTCACGAAATTAACTCGTGTAAATATCACGACGCTCAATATTAC
TTTagctggatttaatttcgcgagtcagagttttgaaaaattttacgtgg
atttaatttcgggAATAAAATCCACGTGAAACTCCGACTTTCACacgttt
tcgcgagttttattttcgcgaaaatggcatgcaaaaattcgcgaaatcgc
gaaatttaatctcgctaAAGTTTATCCGATTAAAGTGAATCGGAAGCAAT
CATTtgcctttttttttaattgttattgGGACTTTATTACGACTGGGAAC
CCATTAGATTttgtataatataataatagaATATATTAGAAATTAACCAG
TACGTTTTTTATTTTAGGTAGAAGCTAGAATATATTTTTacacaaagaaa
taaaa

Run BLAST on NCBI

protein sequence of TCONS_00004230-protein

>TCONS_00004230-protein ID=TCONS_00004230-protein|Name=TCONS_00004230-protein|organism=Clytia hemisphaerica|type=polypeptide|length=826bp
MRFLLLLRRLIFGRSLKQWIVPTGVFFAAVYIILFSTTDGRTNSFSKKLA
HYFMDDGKQFISKEYCNPTSIKRRTHITNRTNIACKPHIASETACNLAQE
LYTTNPKLQTCGYSRPVEICTFEDSSSSSTRISYKCSVKDCLKYERNNIL
VWSVSKDSGELRQNEYFTDEEDFQNSINNIVNDAQKAGFTFLLFECTDER
TYQRPNHDFIGQMFLIPPLPMKKYNQPENDQKININMLMIDSAARSHFYR
SLPRTISTFSTINKYRHVKAEVLDFELFQSIEGHTAENLHGLFTGKLFPK
SFTGADRERSAIGVGDFMKLFKEKGYKTVYQDDLCFNEFWGMRLDLGSPD
NWIDFQKAITENSIESTGLTQSSCKILSINNVSTPFNGPDGPLCFNGRFT
ANQYLDYTHLHHEFAGRQNQKLLTFSTICVAHEHTGTRLQSIDADLAMYA
RKMAEIDNTITMIFADHGNTYTHYTHAVMEGRFEQFHPSLFMIIPNGVKE
KLGKQITANLRENQYRLFTLLDLREAFINIPESPKPVGLFGHISNSRTCD
DLDLRLPNLCVCEGWDAEVKNDTNQMGILHFAAGQLNNKIQDQQLEIRTQ
ALVPKCQMLRPTSFYNVRERNKGGKMITSLDFTTLSGNGASGSHDVFHVE
IESEIDRNLPSRNMKLLNFDRISKYGPYRACADQEVDVRLCVCDIQKATP
VRNIEDVVAYEIGFRFPRLIEPVDISIVKNSRISRCLYLRKISYPEVTSE
SKTSIYSITYEVANVCKTKVKAILNIELDNLKSSTAGPFEVKLAPFTTKF
LVTAIRDTPYWDSTISSEAIQGEPLL

Run BLAST on NCBI

transcript from alignment at sc0000041:285921..290113+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00004230 ID=TCONS_00004230|Name=TCONS_00004230|organism=Clytia hemisphaerica|type=transcript|length=4193bp|location=Sequence derived from alignment at sc0000041:285921..290113+ (Clytia hemisphaerica)
GTAGATAACACTTTCTTCCACTTACTTCAAACATACAAGAGAGAAGGGAG
ACTTTTTAATTTAAGAAATTGAAGTTTTTAACAAACTGTGAACCTTCTTT
TTAGTTATCATTACTACATCATCAAAAAAGGGGTAGAgattaaaaaagat
ttcattacaGAGATATATATTTATGAAGGAGATGATTTTTATGGTTTGAT
ATCATATCAATATTATTACaaactacaaaaaaaatttgagagaAAGATGC
GTTTCTTGCTACTACTGAGGAGGTTGATATTCGGTCGAAGTTTAAAACAA
TGGATAGTACCTACTGGTGTTTTCTTCGCGGCAGTCTACATTATACTCTT
CTCCACGACTGATGGAAGGACTAACTCCTTCTCCAAGAAACTGGCACATT
ATTTTATGGACGATGGGAAACAATTTATAAGCAAGGAATATTGTAATCCG
ACAAGCATCAAAAGACGTACACATATCACTAATCGGACCAACATAGCTTG
TAAACCACATATTGCATCAGAGACTGCGTGTAACCTAGCACAAGAGCTTT
ATACAACCAATCCTAAATTACAGACTTGTGGTTATTCAAGACCAGTGGAG
ATTTGTACTTTTGAAGATAGTTCTTCTTCCAGCACTCGAATATCTTACAA
ATGTTCCGTCAaagattgtttaaaatatgAACGCAATAATATTTTAGTTT
GGTCCGTATCGAAAGATTCAGGAGAGTTGCGACAAAATGAATACTTTACT
GATGAAGAagactttcaaaattcaatcaaCAATATTGTAAATGACGCACA
GAAAGCAGGCTTCACATTCTTGCTCTTCGAGTGTACTGATGAGAGAACGT
ACCAACGACCTAACCATGATTTCATCGGTCAGATGTTCTTGATTCCACCT
TTACCTATGAAGAAATACAATCAACCAGAGAATGACCAGAAAATCAACAT
CAATATGTTAATGATCGATTCCGCCGCTAGATCGCATTTCTACCGATCGC
TACCAAGGACCATATCCACTTTCAGTACGATTAACAAATATCGCCATGTC
AAAGCAGAAGTCTTAGATTTTGAGCTCTTCCAATCGATAGAAGGGCATAC
GGCAGAGAATTTGCACGGTTTGTTCACAGGGAAGCTTTTCCCCAAGTCTT
TCACGGGTGCCGATCGAGAGCGTTCTGCGATCGGCGTCGGTGACTTCATG
AAGTTGTTCAAAGAAAAAGGTTATAAGACTGTCTACCAGGATGACTTGTG
CTTCAATGAGTTTTGGGGAATGCGACTGGATTTAGGCTCGCCTGACAACT
ggattgattttcaaaaagcaaTCACTGAAAACAGTATTGAAAGCACAGGT
AAGTAATAATGCATATGAGTttcatcttttgctttttaaggTTGAAAGCT
TTGCGAAAGATATTGTTTTAGTATATAACGCAGATAGTATAAGTAAAACA
GAGAAGGGAAATAGAGCTTTGGTTAAAGCATACCAAGAAAATTATTAACA
AGGAGAGATACCgacaatcagaaaaaaaattgtataaatgtttaaaaatg
tttcaatcggGGAAAATAGAGGGGAAAATAACGAAGAAAAGAATGTTATT
CAAAGCTGTGCAAATTTATCAATATTTAACGTTAACGCTGGTTAACGAAA
GAAGAATtataaattacacgctatataCTCTCCATCTTAAAGCTTTCTTA
GAGAAATTAGAATCCCACATATCTGCCCCCTAAAACTCTGCACACGTGGA
CATTAACGGGTTGTAGCAAATCattattttagtgaaagatTCCaatagcg
tagccaagaggggcgaAAATTTGTGTatgagagcagatttttatgacact
gtaattatctatcaATACCGTGAATAGATCATGACAGTGTCATAAAAACC
TGTTCAcatacacaaattttgcgcccctcttggctaaGCTAACTGAAGAT
AAATAGCAACAAGAGTCTCGAAGTTAACACTTTCTCAAAAATGATAATAT
GAAAAAGATTACTCAATAATCAACCGATCGTCAGTTTAGAAAATAAACAT
TAGAGCATGAATAATGCTCGAGCCACCAATTTCCTAATTTCCAAGCCAGA
TACTGATTTCTCTACGCAGACACGTACTTACTCAAAAAGTCAGTTTCGTA
AGATCTATCAAGGTTGGCGGAATGATTTGATGATTTTCATCCAGATTTTG
GATGtgtattaaatgagcttttttgCGCACAGTATTGGCAAAAGCAAAAC
AATACGTCAATCTTTATCACAACTTTAGAACCCgcattcactttcgtttt
taggcTAAACAATGCAATTTCGGGTACAACCAGATCTGACACGTTCGTGC
TGTGAGATTAGAAATTCcccatcttttttctttcaggaTTAACACAATCA
AGTTGCAAAATCCTTTCTATCAACAACGTTAGTACACCATTCAATGGACC
GGATGGACCTCTTTGCTTCAACGGTAGATTCACAGCTAACCAATACTTAG
ATTATACGCATCTTCATCACGAGTTCGCTGGTCGACAAAACCAGAAACTC
CTCACATTCTCTACAATCTGCGTTGCACATGAACACACTGGTACACGTCT
TCAATCCATAGATGCCGACCTTGCAATGTACGCCCGCAAGATGGCGGAAA
TTGATAACACCATTACTATGATATTCGCTGATCATGGAAACACCTATACT
CACTACACGCATGCTGTGATGGAAGGGCGTTTCGAACAATTCCACCCTTC
TTTGTTCATGATCATACCGAATGGCGTTAAAGAGAAATTAGGAAAACAAA
TCACGGCAAATTTACGCGAGAACCAATACAGATTATTTACTTTACTCGAT
CTTAGAGAAGCTTTCATAAATATCCCCGAATCACCAAAACCAGTCGGTTT
GTTTGGACACATCTCAAACAGTCGAACTTGCGATGATCTAGATTTACGGC
TACCGAACTTATGCGTTTGTGAAGGTTGGGACGCCGAGGTGAAGAACGAC
ACCAACCAGATGGGGATTCTACATTTCGCAGCCGGGCAACTCAATAACAA
GATACAAGATCAACAACTTGAAATCCGTACCCAAGCACTCGTTCCAAAAT
GCCAAATGTTACGACCAACTTCTTTTTATAACGTTCGTGAAAGAAATAAG
GGAGGCAAAATGATCACTAGCCTGGATTTTACAACATTATCAGGAAACGG
GGCTAGTGGTTCGCATGATGTTTTCCACGTTGAAATTGAATCAGAGATTG
ATCGTAACCTCCCGTCACGAAACATGAAATTGTTAAACTTTGATCGCATT
TCGAAATATGGGCCATACCGCGCATGCGCTGATCAGGAGGTTGACGTAAG
GCTGTGTGTTTGTGATATCCAAAAGGCGACTCCTGTCCGAAACATTGAAG
ATGTGGTCGCTTATGAGATTGGATTTCGTTTTCCAAGGTTAATCGAGCCG
GTTGATATTTCCATCGTTAAAAACAGCCGAATTTCACGATGTTTATATCT
CCGGAAGATCTCTTATCCGGAAGTGACTTCTGAAAGCAAAACAAGTATCT
ATTCTATCACATACGAAGTAGCAAATGTTtgcaaaacgaaagtgaaagcc
aTTTTAAACATTGAACTAGACAATTTGAAGTCTTCGACGGCCGGTCCGTT
TGAAGTAAAACTGGCTCCTTTCACAACCAAATTCTTGGTGACTGCAATTC
GTGATACTCCATATTGGGATTCGACAATTTCTTCAGAAGCTATCCAAGGT
GAACCTTTGTTATAATTTTTgtctaatttgaatttttatcgaATTTCACG
AAATTAACTCGTGTAAATATCACGACGCTCAATATTACTTTagctggatt
taatttcgcgagtcagagttttgaaaaattttacgtggatttaatttcgg
gAATAAAATCCACGTGAAACTCCGACTTTCACacgttttcgcgagtttta
ttttcgcgaaaatggcatgcaaaaattcgcgaaatcgcgaaatttaatct
cgctaAAGTTTATCCGATTAAAGTGAATCGGAAGCAATCATTtgcctttt
tttttaattgttattgGGACTTTATTACGACTGGGAACCCATTAGATTtt
gtataatataataatagaATATATTAGAAATTAACCAGTACGTTTTTTAT
TTTAGGTAGAAGCTAGAATATATTTTTacacaaagaaataaaa

Coding sequence (CDS) from alignment at sc0000041:285921..290113+

>TCONS_00004230 ID=TCONS_00004230|Name=TCONS_00004230|organism=Clytia hemisphaerica|type=CDS|length=4962bp|location=Sequence derived from alignment at sc0000041:285921..290113+ (Clytia hemisphaerica)
ATGCGTTTCTTGCTACTACTGAGGAGGTTGATATTCGGTCGAAGTTTAAA
ACAATGGATAGTACCTACTGGTGTTTTCTTCGCGGCAGTCTACATTATAC
TCTTCTCCACGACTGATGGAAGGACTAACTCCTTCTCCAAGAAACTGGCA
CATTATTTTATGGACGATGGGAAACAATTTATAAGCAAGGAATATTGTAA
TCCGACAAGCATCAAAAGACGTACACATATCACTAATCGGACCAACATAG
CTTGTAAACCACATATTGCATCAGAGACTGCGTGTAACCTAGCACAAGAG
CTTTATACAACCAATCCTAAATTACAGACTTGTGGTTATTCAAGACCAGT
GGAGATTTGTACTTTTGAAGATAGTTCTTCTTCCAGCACTCGAATATCTT
ACAAATGTTCCGTCAaagattgtttaaaatatgAACGCAATAATATTTTA
GTTTGGTCCGTATCGAAAGATTCAGGAGAGTTGCGACAAAATGAATACTT
TACTGATGAAGAagactttcaaaattcaatcaaCAATATTGTAAATGACG
CACAGAAAGCAGGCTTCACATTCTTGCTCTTCGAGTGTACTGATGAGAGA
ACGTACCAACGACCTAACCATGATTTCATCGGTCAGATGTTCTTGATTCC
ACCTTTACCTATGAAGAAATACAATCAACCAGAGAATGACCAGAAAATCA
ACATCAATATGTTAATGATCGATTCCGCCGCTAGATCGCATTTCTACCGA
TCGCTACCAAGGACCATATCCACTTTCAGTACGATTAACAAATATCGCCA
TGTCAAAGCAGAAGTCTTAGATTTTGAGCTCTTCCAATCGATAGAAGGGC
ATACGGCAGAGAATTTGCACGGTTTGTTCACAGGGAAGCTTTTCCCCAAG
TCTTTCACGGGTGCCGATCGAGAGCGTTCTGCGATCGGCGTCGGTGACTT
CATGAAGTTGTTCAAAGAAAAAGGTTATAAGACTGTCTACCAGGATGACT
TGTGCTTCAATGAGTTTTGGGGAATGCGACTGGATTTAGGCTCGCCTGAC
AACTggattgattttcaaaaagcaaTCACTGAAAACAGTATTGAAAGCAC
AGgaTTAACACAATCAAGTTGCAAAATCCTTTCTATCAACAACGTTAGTA
CACCATTCAATGGACCGGATGGACCTCTTTGCTTCAACGGTAGATTCACA
GCTAACCAATACTTAGATTATACGCATCTTCATCACGAGTTCGCTGGTCG
ACAAAACCAGAAACTCCTCACATTCTCTACAATCTGCGTTGCACATGAAC
ACACTGGTACACGTCTTCAATCCATAGATGCCGACCTTGCAATGTACGCC
CGCAAGATGGCGGAAATTGATAACACCATTACTATGATATTCGCTGATCA
TGGAAACACCTATACTCACTACACGCATGCTGTGATGGAAGGGCGTTTCG
AACAATTCCACCCTTCTTTGTTCATGATCATACCGAATGGCGTTAAAGAG
AAATTAGGAAAACAAATCACGGCAAATTTACGCGAGAACCAATACAGATT
ATTTACTTTACTCGATCTTAGAGAAGCTTTCATAAATATCCCCGAATCAC
CAAAACCAGTCGGTTTGTTTGGACACATCTCAAACAGTCGAACTTGCGAT
GATCTAGATTTACGGCTACCGAACTTATGCGTTTGTGAAGGTTGGGACGC
CGAGGTGAAGAACGACACCAACCAGATGGGGATTCTACATTTCGCAGCCG
GGCAACTCAATAACAAGATACAAGATCAACAACTTGAAATCCGTACCCAA
GCACTCGTTCCAAAATGCCAAATGTTACGACCAACTTCTTTTTATAACGT
TCGTGAAAGAAATAAGGGAGGCAAAATGATCACTAGCCTGGATTTTACAA
CATTATCAGGAAACGGGGCTAGTGGTTCGCATGATGTTTTCCACGTTGAA
ATTGAATCAGAGATTGATCGTAACCTCCCGTCACGAAACATGAAATTGTT
AAACTTTGATCGCATTTCGAAATATGGGCCATACCGCGCATGCGCTGATC
AGGAGGTTGACGTAAGGCTGTGTGTTTGTGATATCCAAAAGGCGACTCCT
GTCCGAAACATTGAAGATGTGGTCGCTTATGAGATTGGATTTCGTTTTCC
AAGGTTAATCGAGCCGGTTGATATTTCCATCGTTAAAAACAGCCGAATTT
CACGATGTTTATATCTCCGGAAGATCTCTTATCCGGAAGTGACTTCTGAA
AGCAAAACAAGTATCTATTCTATCACATACGAAGTAGCAAATGTTtgcaa
aacgaaagtgaaagccaTTTTAAACATTGAACTAGACAATTTGAAGTCTT
CGACGGCCGGTCCGTTTGAAGTAAAACTGGCTCCTTTCACAACCAAATTC
TTGGTGACTGCAATTCGTGATACTCCATATTGGGATTCGACAATTTCTTC
AGAAGCTATCCAAGGTGAACCTTTGTTATAAATGCGTTTCTTGCTACTAC
TGAGGAGGTTGATATTCGGTCGAAGTTTAAAACAATGGATAGTACCTACT
GGTGTTTTCTTCGCGGCAGTCTACATTATACTCTTCTCCACGACTGATGG
AAGGACTAACTCCTTCTCCAAGAAACTGGCACATTATTTTATGGACGATG
GGAAACAATTTATAAGCAAGGAATATTGTAATCCGACAAGCATCAAAAGA
CGTACACATATCACTAATCGGACCAACATAGCTTGTAAACCACATATTGC
ATCAGAGACTGCGTGTAACCTAGCACAAGAGCTTTATACAACCAATCCTA
AATTACAGACTTGTGGTTATTCAAGACCAGTGGAGATTTGTACTTTTGAA
GATAGTTCTTCTTCCAGCACTCGAATATCTTACAAATGTTCCGTCAaaga
ttgtttaaaatatgAACGCAATAATATTTTAGTTTGGTCCGTATCGAAAG
ATTCAGGAGAGTTGCGACAAAATGAATACTTTACTGATGAAGAagacttt
caaaattcaatcaaCAATATTGTAAATGACGCACAGAAAGCAGGCTTCAC
ATTCTTGCTCTTCGAGTGTACTGATGAGAGAACGTACCAACGACCTAACC
ATGATTTCATCGGTCAGATGTTCTTGATTCCACCTTTACCTATGAAGAAA
TACAATCAACCAGAGAATGACCAGAAAATCAACATCAATATGTTAATGAT
CGATTCCGCCGCTAGATCGCATTTCTACCGATCGCTACCAAGGACCATAT
CCACTTTCAGTACGATTAACAAATATCGCCATGTCAAAGCAGAAGTCTTA
GATTTTGAGCTCTTCCAATCGATAGAAGGGCATACGGCAGAGAATTTGCA
CGGTTTGTTCACAGGGAAGCTTTTCCCCAAGTCTTTCACGGGTGCCGATC
GAGAGCGTTCTGCGATCGGCGTCGGTGACTTCATGAAGTTGTTCAAAGAA
AAAGGTTATAAGACTGTCTACCAGGATGACTTGTGCTTCAATGAGTTTTG
GGGAATGCGACTGGATTTAGGCTCGCCTGACAACTggattgattttcaaa
aagcaaTCACTGAAAACAGTATTGAAAGCACAGgaTTAACACAATCAAGT
TGCAAAATCCTTTCTATCAACAACGTTAGTACACCATTCAATGGACCGGA
TGGACCTCTTTGCTTCAACGGTAGATTCACAGCTAACCAATACTTAGATT
ATACGCATCTTCATCACGAGTTCGCTGGTCGACAAAACCAGAAACTCCTC
ACATTCTCTACAATCTGCGTTGCACATGAACACACTGGTACACGTCTTCA
ATCCATAGATGCCGACCTTGCAATGTACGCCCGCAAGATGGCGGAAATTG
ATAACACCATTACTATGATATTCGCTGATCATGGAAACACCTATACTCAC
TACACGCATGCTGTGATGGAAGGGCGTTTCGAACAATTCCACCCTTCTTT
GTTCATGATCATACCGAATGGCGTTAAAGAGAAATTAGGAAAACAAATCA
CGGCAAATTTACGCGAGAACCAATACAGATTATTTACTTTACTCGATCTT
AGAGAAGCTTTCATAAATATCCCCGAATCACCAAAACCAGTCGGTTTGTT
TGGACACATCTCAAACAGTCGAACTTGCGATGATCTAGATTTACGGCTAC
CGAACTTATGCGTTTGTGAAGGTTGGGACGCCGAGGTGAAGAACGACACC
AACCAGATGGGGATTCTACATTTCGCAGCCGGGCAACTCAATAACAAGAT
ACAAGATCAACAACTTGAAATCCGTACCCAAGCACTCGTTCCAAAATGCC
AAATGTTACGACCAACTTCTTTTTATAACGTTCGTGAAAGAAATAAGGGA
GGCAAAATGATCACTAGCCTGGATTTTACAACATTATCAGGAAACGGGGC
TAGTGGTTCGCATGATGTTTTCCACGTTGAAATTGAATCAGAGATTGATC
GTAACCTCCCGTCACGAAACATGAAATTGTTAAACTTTGATCGCATTTCG
AAATATGGGCCATACCGCGCATGCGCTGATCAGGAGGTTGACGTAAGGCT
GTGTGTTTGTGATATCCAAAAGGCGACTCCTGTCCGAAACATTGAAGATG
TGGTCGCTTATGAGATTGGATTTCGTTTTCCAAGGTTAATCGAGCCGGTT
GATATTTCCATCGTTAAAAACAGCCGAATTTCACGATGTTTATATCTCCG
GAAGATCTCTTATCCGGAAGTGACTTCTGAAAGCAAAACAAGTATCTATT
CTATCACATACGAAGTAGCAAATGTTtgcaaaacgaaagtgaaagccaTT
TTAAACATTGAACTAGACAATTTGAAGTCTTCGACGGCCGGTCCGTTTGA
AGTAAAACTGGCTCCTTTCACAACCAAATTCTTGGTGACTGCAATTCGTG
ATACTCCATATTGGGATTCGACAATTTCTTCAGAAGCTATCCAAGGTGAA
CCTTTGTTATAA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_002354	XLOC_002354	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00004230-protein	TCONS_00004230-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00004230-exon-sc0000041-1491911889:285921..287268	TCONS_00004230-exon-sc0000041-1491911889:285921..287268	Clytia hemisphaerica	exon
TCONS_00004230-exon-sc0000041-1510915933:285921..287268	TCONS_00004230-exon-sc0000041-1510915933:285921..287268	Clytia hemisphaerica	exon
TCONS_00004230-exon-sc0000041-1575043694:285921..287268	TCONS_00004230-exon-sc0000041-1575043694:285921..287268	Clytia hemisphaerica	exon
TCONS_00004230-exon-sc0000041-1491911889:288307..290113	TCONS_00004230-exon-sc0000041-1491911889:288307..290113	Clytia hemisphaerica	exon
TCONS_00004230-exon-sc0000041-1510915933:288307..290113	TCONS_00004230-exon-sc0000041-1510915933:288307..290113	Clytia hemisphaerica	exon
TCONS_00004230-exon-sc0000041-1575043694:288307..290113	TCONS_00004230-exon-sc0000041-1575043694:288307..290113	Clytia hemisphaerica	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000041	supercontig	sc0000041:285921..290113 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0481707	0.023487	0.177259	0.186761	2.501	2.37415	4.72224	4.97331	3.62288	3.72075	3.63585	2.2858	3.1316	2.11268	2.78316	4.91678	6.64469	6.51408	3.9429	3.349	7.45187	7.80338	3.27247	4.00453	6.76223	6.42747	0.693542	0.669675	0.735154	0.503877

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR017849	Alkaline_Pase-like_a/b/a
IPR004245	DUF229
IPR017850	Alkaline_phosphatase_core

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008152	metabolic process
molecular_function	GO:0003824	catalytic activity

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00004230 vs. Swiss-Prot (Human)

BLAST of TCONS_00004230 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00004230 (transcript) - C. hemisphaerica