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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:4227563..4231679+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000584 ID=BlTCONS00000584|Name=BlTCONS00000584|organism=Branchiostoma lanceolatum|type=mRNA|length=4117bp|location=Sequence derived from alignment at Sc0000000:4227563..4231679+ (Branchiostoma lanceolatum) CACCATTGTTGATACTAAAGCGTCAACCCGGCCGCGCGCGGATCATTACA
CGTACACACTTACCCGTACACGTACCCACTTATTCGTCGCCATCATTTTG
TCAAGGCTGTCTTTTTTGAGGGGCCCTAGTAATTTTTCTATCCTTTGAAC
AAGTTTCACAGAGTTTACAGAAAAGAAGATGAATATTTTCACCAAGATCG
TCGTGCTCATCGTCCTTATGGTCCTTATCGCAGTGGCTGATACGGCAGGT
ACGTAAAAGACACTAAATTTTAACCCTTCTTTCAAATTTGGTGAAACGTC
GCCAATATGAGACTGAGAATTAGAGACAACCCATAACCGAGGCAATATTC
CTTCCTCGTCGTCGTGAAAAGACATCATAGATACACATTTTTAGCGGTAG
AATTTTTAGAGGTAGAAGAAAATAGTGTTAGATTCCGTCTTTTTCATTCT
GTGAACTTATTTGAATGACATGTTAAGAATGTTACACACCACTAATACGC
ACCAAATTATGCTCCATGGCCGGGGGGCCTACTGGCACAGGTTCTGCGAG
TAGGTGTTAATCATAAGTGGGACAGACTCAGTCGGTATGTTAGTGTCGTT
GTTGTAAACACTGTGGCAGTTAAGGTGCCCCTTTTATGCAATCAGGCCAT
AACTAATGGCGTTTATCAACTTAAGTCAAAGATCACGTTGAAAAACAGAA
ACGTTTCACCTCGTACGAACCTTAGTATATTTCTTGTATATTCATGTTCT
ATGGACTCAATGTTATCTTAACAAATCTCAGAGTTGAATGTTGCCTTTCA
CTGTACACCATACGGTCTTTGTACAAGTCATTATACTTCATTAGTTTACT
GAGTGAGAACTTTAAGCCCTTGTTGCACATTCAGGACCTTCCCTTGTCCT
TGCCCCGACCACATCCAAACCAAGGTCGGCGGTAGCGTGGGGCAGTCTGA
CGAGTTTTAGACCACGCCTATATTTCACTACAGCCATGTCAAAACTTTTC
ACAGCCATTTTACAATCAGAACATGACTTACTCCCAATCTTTCCCGAATC
GCAAGGTCTCGACCACCCCGATTTCTAGCTGCAGACTTCCGATTCCCTCC
TGACTGATTCACGAATTAAAATGGACATAAGCGCTGACTTTTAAAAGAGA
GTGCACTTTGTTTTAATCTCGTAAACTTACATATTTAACGTTTTGGTGCA
AGTGAAGATTTAAAGCACTGTGACCTCTTTGTAAAGTTTGTGTTTGAGCA
GGCAAAATGTTTTGGTGCGAGTATTTTTGCCATGTGTATCAGCACGACTT
ACTCGTACGATTTGCAGTATGGTTACAAACTTTTGTTTTTAATTGGACGA
AAATTGATGCACAGAGCATGTCATCCATATAATCGAATCAGAAGATGTCA
TCCATATATCAATATGATTAGGGTGGCGTATGGCACTGAACTATACAGCC
TTCAGAATTTTCAGATATATGATAACCTTTCATGTTTGATGTTACGTTCA
TCTTTAGGACGGAGACGTAATGGGGGTCACAAGAAGAGAATCCAGGAGAT
TCGGAGAGCAAAAGGTCGTAAGAAATGAAACATCTATCCCGTTTTAGTTC
ATTCTGAGATTCAACCAAGCATGTAAATTTGAAACAGACGCATATATGCG
TTAAACCAAACATACAGTCATGTACACAACTTTCGAGCAATGATCTAAAA
TGTTACAGAATATATGTACGGATCTTTGTACTGCTTTTGTATTTCCACTT
TGAGGAATCCCCATTTAACAAAGGTATAAGGTCGCGGGAATATTGTTTAG
AAAATACAAAGAATGACGTATTTTCGACTAGTCCTTCCGTCCGCACGTTT
AAGAATAGACTATTTGATGTAAATTCAATGTTATGTGTAAATGTCTGTAT
ACTGTCCATGCTGTTCTTAACATGGGCTATGGGCCTGATACAAAGAATGA
AATAGAATTAATAAGATACATTATTGTTATAAAACTGTTAATGTAACAAC
ACTCTTCCTCCCAATTAAACTATTTCAGCTTCCGCTGCCCTTCAGAGGGC
AATAGAAAGACTGCGTAGCAGGGGGAAACACACTCTGGCTGACAGACTTG
AGAGACGCCGGGGTGACATCTTGGGATTGGGTAAGAGTTTGATATAAGTT
TTGCAATGGTTACAATACGTTACAAGACATCGCAGTTATTGCTATTGGCC
AAGTGCGCATTATATCAACAATACTGGGAGAGTATGCTAACATTATTGTA
CTTTCCATCTGAAATATATGCCTCATGTGAAACCTTATTTGTTTAGTAGA
TTAGACTTTGCAGTGCTCCTGTTTATTGCTACGCAGTGCGTACACCTACA
GCTTTATGGAATATCACTTGGCGATGCCCCTATCAAACCGTTATGAATTG
TGATTCGCACGAGGTGCACATGTCCAATAAGGAGGTTCACTATTCTATGC
GCGCATGCACTGCGCAATGCATTGTGGGTGAAATGTCAAAGGTGAAGGCC
CATAACTTGTAAACACTTTTTGTCTTGACCATTGCATAACAATGTCCATA
CGTCTTTTTTTGACATATTGCCTTTAATGCATTTTTCTGCATGTGCGTTC
TCCTTATTGGAACCTCCTTATTCTTCTCCTCTCTTCAGACTGCCCGAAAG
ACCAGCCTGCCGTTCATTGTCCTGTCAACCCCTGCGATACGGCTGATTGT
AGGGCCAACCAGGACGCCAAATGCGAGCCCAACTACTGCGGAGGCTGCCA
CGCATTTTTCTACGACGCGGATGGAAACCGCGTGGACTGTGACGGTTAGT
TCAAATTTGAATTTGAATCAGTTTCTACGGGTGGGAAGAATAAGCTACTG
GATAATGTATCGAGAGAAATAGGCACGCAATTTGTACGTACAACGTTAAC
TAGGCTAACCAATCACATTTTCCATATTCTTCGATGAAGGTAAGACATCC
AAGTATACTTCGAACACTACATAATGCAAAATAAATCAAGCAACAGGATG
CTAAAATTCTGTCATACGTTTCTGATAGCATCCACTAAAATTCATCATAG
ACTGACACATACGTTTTCCTACATGACGTTATTCAAAATGGAACTAAGAT
AACCAATTAAAGGATGCTATTCTCCCATATGACATACCCCTAGGATGCCC
GGATGACCAGCCACTGGTGAACTGCTTTGCTGACCCCTGTACTGTGACCA
CCTGCCCCGCCAATCCCGATGCTACATGTGTGTCCAACTACTGTGGCGGC
TGCAATGCCGACTTCTTCAACAGAGACGGCGAACCAGTCTGTAAGAATGA
TTTCTTTAACTTACGCCAAAAATAGTTACTCAAGCAACTGAATGACATTT
TGAAACAGTGCAGACCTCTTTAACCTTGTTTAAGCAGCGTTGTGGACATC
AACGTGGACCGGATAAAACTGTTTTGACCTTGATTGCACTAAAAAGGACA
CGTAAATTATGGAGCCAAAGACTTCGACATAGGAATCTTAGGGGAAGTAC
ACACATCGCTATTGTTGGAGAAATCTGTAGTTATGGTCCTACCAATGATA
TGTTAAGATTTAAGAATGAAACAACTTTTCAGTAATTGTGCTGATAAAAA
AAATCCATTGGTGACAAATGTGATAAAATACGACCGGAAACAAAATTCAA
TGTGGCAGCACCTTGGACACCGATAACAATAGTATATTTTTTTCTGCGTG
ATGTTTATTTTTCACTAGTCTTCTCTGTTTATGGTTTACATAGATTGGCT
TTTGGTATTTCAGTTGACCAAGGAGTTGACAGCATGTATCTGCCAAGAAT
ACTTCATTCAGTAAAATCTACCATGCAACGTTCCTGTAGTAAATTCAACG
ACGTGAAACGAACAATAAAATGACGTTGACCTTTGACCAATCAGGTTGTG
ATGGCGTGGGACAACCATGTGACACCGGCAGTCCACATGCAACAGAGGAC
GACCGCACCTGTCCATGCGGCTTGCTGTGTTTTCCCAACCAGGATGACTT
CACCACGGGGACGTGTCAGACCCAGCAGTGGGTGGACGACAACGGAGGAA
TGCCTATCTTACCTATTGGTTAAGACAACGAAACGCCATGGAGGTTCTAA
CAATGATAGAACTTTCC Coding sequence (CDS) from alignment at Sc0000000:4227563..4231679+ >BlTCONS00000584 ID=BlTCONS00000584|Name=BlTCONS00000584|organism=Branchiostoma lanceolatum|type=CDS|length=711bp|location=Sequence derived from alignment at Sc0000000:4227563..4231679+ (Branchiostoma lanceolatum) ATGAATATTTTCACCAAGATCGTCGTGCTCATCGTCCTTATGGTCCTTAT CGCAGTGGCTGATACGGCAGGACGGAGACGTAATGGGGGTCACAAGAAGA GAATCCAGGAGATTCGGAGAGCAAAAGCTTCCGCTGCCCTTCAGAGGGCA ATAGAAAGACTGCGTAGCAGGGGGAAACACACTCTGGCTGACAGACTTGA GAGACGCCGGGGTGACATCTTGGGATTGGACTGCCCGAAAGACCAGCCTG CCGTTCATTGTCCTGTCAACCCCTGCGATACGGCTGATTGTAGGGCCAAC CAGGACGCCAAATGCGAGCCCAACTACTGCGGAGGCTGCCACGCATTTTT CTACGACGCGGATGGAAACCGCGTGGACTGTGACGGATGCCCGGATGACC AGCCACTGGTGAACTGCTTTGCTGACCCCTGTACTGTGACCACCTGCCCC GCCAATCCCGATGCTACATGTGTGTCCAACTACTGTGGCGGCTGCAATGC CGACTTCTTCAACAGAGACGGCGAACCAGTCTGTTGTGATGGCGTGGGAC AACCATGTGACACCGGCAGTCCACATGCAACAGAGGACGACCGCACCTGT CCATGCGGCTTGCTGTGTTTTCCCAACCAGGATGACTTCACCACGGGGAC GTGTCAGACCCAGCAGTGGGTGGACGACAACGGAGGAATGCCTATCTTAC CTATTGGTTAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000584-exon-Sc0000000-1564993656:4227563..4227810 | BlTCONS00000584-exon-Sc0000000-1564993656:4227563..4227810 | Branchiostoma lanceolatum | exon |
BlTCONS00000584-exon-Sc0000000-1564993656:4229070..4229126 | BlTCONS00000584-exon-Sc0000000-1564993656:4229070..4229126 | Branchiostoma lanceolatum | exon |
BlTCONS00000584-exon-Sc0000000-1564993656:4229591..4229692 | BlTCONS00000584-exon-Sc0000000-1564993656:4229591..4229692 | Branchiostoma lanceolatum | exon |
BlTCONS00000584-exon-Sc0000000-1564993656:4230201..4230356 | BlTCONS00000584-exon-Sc0000000-1564993656:4230201..4230356 | Branchiostoma lanceolatum | exon |
BlTCONS00000584-exon-Sc0000000-1564993656:4230706..4230852 | BlTCONS00000584-exon-Sc0000000-1564993656:4230706..4230852 | Branchiostoma lanceolatum | exon |
BlTCONS00000584-exon-Sc0000000-1564993656:4231457..4231679 | BlTCONS00000584-exon-Sc0000000-1564993656:4231457..4231679 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:4227563..4231679 + |
Properties
Property Name | Value |
GeneID | BlCUFF000316 |
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