|
Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:4144137..4151224+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000581 ID=BlTCONS00000581|Name=BlTCONS00000581|organism=Branchiostoma lanceolatum|type=mRNA|length=7088bp|location=Sequence derived from alignment at Sc0000000:4144137..4151224+ (Branchiostoma lanceolatum) CACCATTTGTATTATTTTGTAAACTTCAAGGAGAACTGGTTTCTGAGGCG
TCTTTAAGAAAGTAAGAGAATCTAAAGTTGACAAGGAAAGTGTCACATCT
TGCTGGTCTAAAAAAAGGAAGCAAGGTAAGTTCTTCTAATTTCAGAATCT
TCCTAGCAATCAACCTCGCGTATCGCTATAAAGGTGTTTCTTTGTTTGAC
GGTCGCTGCAGTAGAATACTAGTACATGCGCCCATGTACCTATACTATAG
ATATTTTTGCCTGACCAAAAATGTTATCTAGTGTTTGTGAATCACTTCGT
TTGTAGACACGTGGTTAGTAACATTTGTAATTTATGCATTTCGAAAACCT
GGTTGGAAAACCGTTGCCAACTGCAAGTTGCGCACAAAATTACAATGAAC
TCTTTGCGTTACTTGATATGCGCTTTATCTTAGTGGTGACATACAAATTT
AGCGAACGCTTGAGAGCGTCTTCGCTACACATGAACGTGTTGTCACAAAT
GTATGTTGAAATGATAACTATTTGCGTCGCCTGTGCATTATACTGTTGTT
CACTTGGGCCTACATTTGAGGACTGGAGTAAGTAAAGTGCAAGATGTAAC
ATGATAATTGAATTAGATTTCATTTCAGAGAGAGACGGCGGCTCTTACAG
AATGAGTCGGCAGGCGCCCGTCAGTAGCTCGAGCACGAGCGCCCCCAGCC
GAGTCGTGGCGGCACCGCACTACGCCCGCCTGCAGCACGCCAGTGGTCAC
ATTCGCCCCAGTATGGGATACTGTGTACCAGGGCCACAGTGGCAGTATGT
ACCCAGTAAGTTTTTTGCTATTAAATCTATTTACCTCCATTTTCATAGAG
GTATTTTTGGGGTGTTCTGTGTCTATTGTCTGTCTGCAGCACACAAATAC
CATGGAAACGCAAACTGAGTTTGTGTTTCCATGGTATTTGTGTTCGGCAT
AATCTAAGAATCTCTGGATGGATTGTAATATTTAGAGGATAGGTTTTTCT
TGGAGGACAAAAATTAAGGTCAAGTCTGGTGATACACATCTTGTCCTAAA
ATGACACCTTAATGCCATGTATAGAAATTAGAATGTCATGGGATAGTTAT
ACAGATCTCGTGCGTAAGTCGATAAAAAAACCTCACTAGTATTTCGGTTC
CACAATGTTCTATCTTTGCGAGGCTCACTACATTGAGCAGGATACACGAC
TGGTGACCTCTCTCGACCCACATAGCGACAGAATGATCAATAAGATGATA
GCGGTCGCTAAAACAGGAAGAGGAAGAGGCATTGTAGCTGGTTCTTTGCT
GACTTTCATCCTCTTGAATCTTCATCGGCGCAAATATTCTTCTGTCCACA
GATCACCCGTCCGTCTATCCCAGCGTCCAGCCCTACGCACAGCCATACGT
GGTACAGCACCCCCTTGCCCACCCTCACCATCATCCTCACCCTAACCCCC
ATGCAGAGCCTTATGTGGTCCGTCAGCCGATTTTCCAGCCTCACTACCAC
CCCTCAGTGATGCCTCAGGTAACTCTTTCACAGTTTCATCAGGATAATGT
ACATTGTGACTGAATTCACAAATAATAAGGCAGTTCAACGCTTGAAGTGT
GCATGAGCAACAAGCCCATTTATAGATTCGAGTGCGCATGTGCAGTGTCA
AAGGTGAAGGCCGCTGGCTTGTAAACAGTTCTCGTATCAAAATTGTCTCA
TTTTGCATAACACTGCCCAGACGGGTATTGCTTAGGTCTCAGGGACCTTC
ACCGTTGACACTGCACATGCGTACTCGAATCTACGAATGGGCTTATATCA
TGCATCTGGGCTATCATTGTCTGTTTCGAATTTTAGTGTGACGTTTTATA
TCTTAGCTGCTACTGGATTCTGTAGCCACTAGAAAAGTTTTGCAATGTAG
GAAGTGGTAGGAAGAAGGCTGATAGAGTTTTCGTTAACCAAAGCAAAAAT
GAAATACAGTTTTTCGAGAAACTTGACCTTTCTGGATACGATTCTGAGTA
GTTCCAGCGGTTCTCTTCTGTGTAGGGATGTGTCATTGCTGCTCCTACGT
ACGTAAAACCGACAACGGCAGTACACCGACCCAGCCAACAGAGCATCCAG
GCTGTAGCCTCATCTACCACGGAAGTAGCAGACGTCTCCGGTAAACAGAA
GACCATGGCGTCCCCCAAGGTCGACGACGACCCCGCGGTTATAAAGATCC
TGCGACGGGAAGAGGCGAAACCGCCACAGGAGGCCAAGACGAGTGATCCC
GCTCTGCCTCCACAGATAATCATTACAGACAAGGAGCCCTTACGGTAAGT
ATAAGTTAGTTCACGGTTTTAAATGCGCAAGTGCATTGTGGGTAATATGT
CAAGATTGGTTATCCCTGGCCATTCTTTATGTGTTGCCAGGGCCTTCAAC
TTTGACATATTACCCACTATCCACCACACTGGGCATGCGCACTTCAAACC
GTTAACAAGCTTATTTAGCTTATTTAGAACAAAAAAAGGGAAAATAAAGC
ACTGCAGGTCGAATTTTTAGATCTGCTTTGCGCAGTCCTTCATTTTTTTT
TTTTTTTTTTTATTAAACAACAGAAGAATAAACAGGACACAGAGGTGATG
TACTCTAGCTGAAGCTAATATTAAACATCACCTCTGGAAAAAAANTTTTT
ATTTTTTTTTTTTTTTTATTAAACAACAGAAGAATATACAGGACACAGAG
GTGATGTACTCTAGCTGAAGCTAATATTAAACATCACCTCTGGAAAAAAA
AATACAAGTTACATAGACAAGTACAATAGCAATGAGAAACAGCAATTGGG
TCGTCCAATACAAACAAGCTAACAAACAAACAAACAATGAATATATCAAT
ATACCTGAACTAAGTTTTAAAACGTCTGCTTGTCAAAATATAGTGCTGAG
TCAAGCCTAAAATGTTACAGTTGAAATCATACGAAACAAAGGATGAACCT
CTTAATAATAAATAAATGAAGGCTTGATCAGACAAAGTATCAATATCAAG
AATAGGGGCTAAAAGGTTCCGTAGGTTGCCCAGAAGGTTGAGTCTTTGTT
GATTGTATATAGGGCAGTACAAAAGATAATGAGCAACGCTTTCGCTTCGA
CATCCGCAAGTGCAGGCTGGACTTGTTGCTAAGTTGCGTGTAAATAAACT
TAGGTTAAGACTGCACGTGCCGGTGCGAAGGCGTGTGAGGAGGGCGCAAG
TGTACCGGGGGCCATGACTAAAATGTGAATAGAAAGAGGGACGTACTAAT
TTCACTAGATGTTTTTTAAACAACGAAAGATTTAAGGATCGAACAGCTAT
ACCAAGACCGTTCCAATGATGCGTTGCATAAGGAATAAAAGACTTTTGAT
ATCGAGTTGTAGAGCAGAGCGGTATCCTTAGATTAAGTTTGTTGCGAAGA
TTATAAGAAGTAGAAATGGAGACTTCAGGAGGGATCAAATCCTTAAGATA
CTGGCGAGTATGGCCATGGACAATTTTGTAGAACATGATCAGAGAGTGAA
CGTGACGACGATCCGAAAGTTTTTCCCAACCTAATTCAGAAAGTAGCGAA
GAATACGAAGACCCTCTTACAGCCCCTGAGACTGCAAGCGCGCATTCGTA
TTGGACACGTTCTAATCGCTGGGAATCATATAAAGTACATCCATGCCAAA
TAATGTCAGCATATTCAAGGAGAGGACGAATAAAGGAGTCCTTCATTGCA
AATGCCAAGCTAGTTTAGAAATTTGCACTCACTATGACGTAAGTATTGCC
GGCCATGTTGGATGGTTTAAAGTTGGAAGTATCCAGTTTACGTTGAATTG
TGTAAATATGTAATCACAGGCACGTAATTATGACAAAAAATGCATATTTA
TATGTCGAAGCCTTCCAAGCTAGTTCTGCAAACAGGTTGTGACGCAGCGC
ATAAATAATCTGTTAGTTTTTGTGTGTGTAACTATATAGTTTCTTGTTCC
TACAGCTTGGATGACGCCTCCAAACGCACATCGACCCCTTCAATCATATC
AGACGACACAGGATTTGACTCAGCTAGTCAGAAGACGTCCGAAAGTGGGG
AGGACAGAAACGGAGACTACCTGGACATCGTCCACAACCTCATAGAGAAG
ATTGAACTCGACCAGGGGGCAAGGAAGGCACAAGGCAGCGCAGAATACGA
CGCCGAGGGTGTACCTATCTCCATCGATAACTCCTACTCTAATATACAGT
TCTCACCGAATAAAGCTCCGAGTCTCTTGGGACGCGCGTTCCGTCTGTCG
GGGCGCTGCAAGCCCAAGAAAAAGTCTCCCGTCAAACGGACCAAGGGATT
CGGTGCTCCTCCGAAAACGACCGACGCCTCGACGAAGAATCCCGACAGCG
ACGCGAAGCCTTCCGAGGACGACAGTTGGGTTGAGGGCGGTGACAACCCC
GTCTTGGCGTATCAGATTACAGAACCGACGTTCGACTTCGACAGGGCGAG
GCAGGAAGCGGAAAGGCGGGCAGTAGAACGTGAGATGGCGGAGAACGACG
AGGCGGCGCCTTACCATGGGAAGCGATGGAGGAGGAAATCCAGGCAGCCA
AACAGACAGCCACCTATGTATAAGGTAAGGACAGATTTCGTGCTGAAATC
AGCTTGTAACGTACGCGTAAGTCTGTCGTGGTGTATTTATTAATGCTGAC
AATATGTGGCATCAAATTGGTTGGGTGATGCAAATCAAATCTTAACATGC
GATGTGCCAGGTACTAAACCTCATTTGTTCTAAATTGTTAAGAAGCAGCT
TATGCAGTAGTCCTGTAAATCGCTAGGTGGTGCACTTGCAGAAAGGGACC
TCACGTGATGACACTTTTCCCCATACATTTCCAGGCCTGGCAAGCTTTCA
AGAAGCCTTTCAAGAACAGGAACCAGAGCCAGAGGGGCGAGGGCGATGGT
TACTATGGCAACCAAAATGGCAACAAAAACAGTAGCGGTTTTTGGCAGCG
GGGCCGAACCCGACGGCGGCACAACACCTTCGGATCACAGGTGAGTGAGA
CAAGTTACCGCGAACACGAGGCGAACAGCAGAAATGTACCAAACGTAATT
TTGCGGTCATGAATACCGGTATCATACGATCAAATATCTTTACTCTGCCA
CATAACGTTTGCTTATATAAATCTATCTAAGGGTAATGTGACATTCATGC
CTTACAATATGCAGCCCCTTGTACGAGATATCTTAATATCTCAACATCTT
NACGAGACATTTTAATACCTTTAATGCGAGCTGGGCAACTAAGGGTGTGT
TCTGTCTTTGACAGAGACACCTGACGGACCAACTCAAACTGCACCAAGAC
GGGCGTGTCCGAGGAACCTATTCAATCGACCCTCGCGGCGCATGCGTCAA
CTTGAACTTAAACATCTCAATCCCATACAAGAAAAAGTCGACTGAGGTAG
GAACGGGATCGGACCCTTTATGACGAGATAAATCGACCACAGCGCAAAAT
TACATTCTAAGGAGTTGAAAAGATTGAAAGATTGTCAGCAATGTTCTGTC
ATAAACTTTCTTTGTCTATCTAGCGAATAGAAGAAGAAGAAAAAACACAC
CAGGCTGTTATTTGTGAGTACACGTACAGAGGGGCTGCAGGCATGATGCT
TACTAGTCTGGCATATGGTTAAAATCCGATTCAGTCAGAACTAGCTACTG
TATAAGCTAGTTCACAGCTTGTAGTGCGTATGCCCAGTGTCATGAATTCT
GGTTAGATGCTAGAGGTTGAAAGGGACAAGGGCCTTAAACTCTGACATTG
AACCACAATGCATCACACCGTGTTAAGTTGCTTATTCCGTTTTGTATTCT
AACGATCATCATTTAAATAGCTTATCACTCTTATTTCACTTCTTTTACTT
TTCTCTGTTCTAACATTGCTTTTAAAACCATTTTAAAGGCTGACCTTGAC
GAGTCCCGAGCAACGATATTCGACGACGACGAAGCCGAGCCCGAGGCGCC
CCCGATGATGCACGAGAACATGCCGAGCGCCAAACGACGCTCCCGACGCA
CGACCTCCGAGCCGAGGCGACGTAAAAACTCGTATCTCCGACCAAACGGT
TGCGAAGGTGCCAGACAGCCCGGTAAGAACCATAATCAGCCATTAAAACA
ACGCCCTACTTTCTTAATGTTAGCTGGCTAGTATACATATCTTGCCACTG
GCAATGGAGATAATCAAAATATCAAAACACAGCTATGTTATACATACTGT
CGCTAATAGCGGTTTGAGAGCCATGTAAAGCAATGCTATGATAACGGTTA
ATCTAAATGCTATGAAATTTCTAAAAAGAAATGTAAAAGTCAGCCGGTTC
CTTACACCACTGTTCCTGTTCCTGAAGCTGTCTTGATTTTACTGATGCCC
GTCGGGATAATTGATTGACGTTTTATTTCAGGACACGATGACTGGGATGA
GTGGGTTCACGCAGGAGGGATGGTGTCAGGAAAGTGGGGAGTCGTGCCGA
GGCGAGGTAAGACAACAAACCTTAACTTGACCCTGGTAGTCCAATGAGCT
TAAAATGATATCAAACCTCATTGAATAGACTGATCATAACTGTCCATCAC
AGTTATTAGTTCAACCAATGATAGAATGGCAATTAGCTGTTCGACTTTTG
AGAGAGTGGCTACGTGTCCGTCAAATACATGCACTTGAAATGTGTGTGGT
TTTGCAATACGGACTTTTCTTGTAATTTGGTTAGAAAGCATGTTTATCAA
GTTTTTCCTATCTATCTTACGGAAATGTCAAGTATAACATAAGATTTCAT
TTCGTAAATCACATTTCTTATCACAGATATAAGCTCCTCTCATTTGTTGT
TCCTGCTATTTTCATGTAGAGCGCCTGCGCAGGACAAGCAGCCGCAATGA
CTTGTGGGTCGATGACAACCCCTCCGCCTATGACGTAGCCTGTGTGGGTG
CACGTCAGGACGCACTGCGCAAGCGTCAGGCAACAGGCTCATGTACACGT
CAGCGTCTGGGCTCGAATCATGCATAAATTATCATAAACAGACCTAGACG
ACATGGATGAAATGTGACCTACGCATGCGCAGTTGTGAAAAGAATGATAT
CACAGGCGTGTATTTAATGTATCTTAATGAATAATGAT Coding sequence (CDS) from alignment at Sc0000000:4144137..4151224+ >BlTCONS00000581 ID=BlTCONS00000581|Name=BlTCONS00000581|organism=Branchiostoma lanceolatum|type=CDS|length=1782bp|location=Sequence derived from alignment at Sc0000000:4144137..4151224+ (Branchiostoma lanceolatum) ATGAGTCGGCAGGCGCCCGTCAGTAGCTCGAGCACGAGCGCCCCCAGCCG AGTCGTGGCGGCACCGCACTACGCCCGCCTGCAGCACGCCAGTGGTCACA TTCGCCCCAGTATGGGATACTGTGTACCAGGGCCACAGTGGCAGTATGTA CCCAATCACCCGTCCGTCTATCCCAGCGTCCAGCCCTACGCACAGCCATA CGTGGTACAGCACCCCCTTGCCCACCCTCACCATCATCCTCACCCTAACC CCCATGCAGAGCCTTATGTGGTCCGTCAGCCGATTTTCCAGCCTCACTAC CACCCCTCAGTGATGCCTCAGGGATGTGTCATTGCTGCTCCTACGTACGT AAAACCGACAACGGCAGTACACCGACCCAGCCAACAGAGCATCCAGGCTG TAGCCTCATCTACCACGGAAGTAGCAGACGTCTCCGGTAAACAGAAGACC ATGGCGTCCCCCAAGGTCGACGACGACCCCGCGGTTATAAAGATCCTGCG ACGGGAAGAGGCGAAACCGCCACAGGAGGCCAAGACGAGTGATCCCGCTC TGCCTCCACAGATAATCATTACAGACAAGGAGCCCTTACGCTTGGATGAC GCCTCCAAACGCACATCGACCCCTTCAATCATATCAGACGACACAGGATT TGACTCAGCTAGTCAGAAGACGTCCGAAAGTGGGGAGGACAGAAACGGAG ACTACCTGGACATCGTCCACAACCTCATAGAGAAGATTGAACTCGACCAG GGGGCAAGGAAGGCACAAGGCAGCGCAGAATACGACGCCGAGGGTGTACC TATCTCCATCGATAACTCCTACTCTAATATACAGTTCTCACCGAATAAAG CTCCGAGTCTCTTGGGACGCGCGTTCCGTCTGTCGGGGCGCTGCAAGCCC AAGAAAAAGTCTCCCGTCAAACGGACCAAGGGATTCGGTGCTCCTCCGAA AACGACCGACGCCTCGACGAAGAATCCCGACAGCGACGCGAAGCCTTCCG AGGACGACAGTTGGGTTGAGGGCGGTGACAACCCCGTCTTGGCGTATCAG ATTACAGAACCGACGTTCGACTTCGACAGGGCGAGGCAGGAAGCGGAAAG GCGGGCAGTAGAACGTGAGATGGCGGAGAACGACGAGGCGGCGCCTTACC ATGGGAAGCGATGGAGGAGGAAATCCAGGCAGCCAAACAGACAGCCACCT ATGTATAAGGCCTGGCAAGCTTTCAAGAAGCCTTTCAAGAACAGGAACCA GAGCCAGAGGGGCGAGGGCGATGGTTACTATGGCAACCAAAATGGCAACA AAAACAGTAGCGGTTTTTGGCAGCGGGGCCGAACCCGACGGCGGCACAAC ACCTTCGGATCACAGGCTGACCTTGACGAGTCCCGAGCAACGATATTCGA CGACGACGAAGCCGAGCCCGAGGCGCCCCCGATGATGCACGAGAACATGC CGAGCGCCAAACGACGCTCCCGACGCACGACCTCCGAGCCGAGGCGACGT AAAAACTCGTATCTCCGACCAAACGGTTGCGAAGGTGCCAGACAGCCCGG ACACGATGACTGGGATGAGTGGGTTCACGCAGGAGGGATGGTGTCAGGAA AGTGGGGAGTCGTGCCGAGGCGAGAGCGCCTGCGCAGGACAAGCAGCCGC AATGACTTGTGGGTCGATGACAACCCCTCCGCCTATGACGTAGCCTGTGT GGGTGCACGTCAGGACGCACTGCGCAAGCGTCAGGCAACAGGCTCATGTA CACGTCAGCGTCTGGGCTCGAATCATGCATAA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000581-exon-Sc0000000-1564993656:4144137..4144261 | BlTCONS00000581-exon-Sc0000000-1564993656:4144137..4144261 | Branchiostoma lanceolatum | exon |
BlTCONS00000581-exon-Sc0000000-1564993656:4144767..4144941 | BlTCONS00000581-exon-Sc0000000-1564993656:4144767..4144941 | Branchiostoma lanceolatum | exon |
BlTCONS00000581-exon-Sc0000000-1564993656:4145488..4145654 | BlTCONS00000581-exon-Sc0000000-1564993656:4145488..4145654 | Branchiostoma lanceolatum | exon |
BlTCONS00000581-exon-Sc0000000-1564993656:4146162..4146430 | BlTCONS00000581-exon-Sc0000000-1564993656:4146162..4146430 | Branchiostoma lanceolatum | exon |
BlTCONS00000581-exon-Sc0000000-1564993656:4148092..4148710 | BlTCONS00000581-exon-Sc0000000-1564993656:4148092..4148710 | Branchiostoma lanceolatum | exon |
BlTCONS00000581-exon-Sc0000000-1564993656:4148971..4149126 | BlTCONS00000581-exon-Sc0000000-1564993656:4148971..4149126 | Branchiostoma lanceolatum | exon |
BlTCONS00000581-exon-Sc0000000-1564993656:4150025..4150208 | BlTCONS00000581-exon-Sc0000000-1564993656:4150025..4150208 | Branchiostoma lanceolatum | exon |
BlTCONS00000581-exon-Sc0000000-1564993656:4150518..4150592 | BlTCONS00000581-exon-Sc0000000-1564993656:4150518..4150592 | Branchiostoma lanceolatum | exon |
BlTCONS00000581-exon-Sc0000000-1564993656:4150956..4151224 | BlTCONS00000581-exon-Sc0000000-1564993656:4150956..4151224 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:4144137..4151224 + |
Properties
Property Name | Value |
GeneID | BlCUFF000313 |
|