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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3960232..3966153+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000562 ID=BlTCONS00000562|Name=BlTCONS00000562|organism=Branchiostoma lanceolatum|type=mRNA|length=5922bp|location=Sequence derived from alignment at Sc0000000:3960232..3966153+ (Branchiostoma lanceolatum) GACGCCAACAATCCTTGCCATGTGCGTCACAGGTGCCCTCGGGACAGTAA
ATACCACAGACAGATAATATCCACCACCAATCTCCTCCCAGGCTTCGGGT
TATTTTATCCGCTATATGAAACCCTCTCGACTGTAACGACGTCACGAAAA
CAATCGCCCCCACGTTTCCTGCGGTATGCGTGACATGGAAGGCACACCGT
AAACTTTATCCGGCGGGCCCTGGTGTCATGAAGGACAGTGGTACGTCCGA
CCATGCACGCTTGGTCACAAACTGCAGTTTCAAATCAAAGAAAGAAACAG
AGACAGCGTTCACCCGGAAGGCGTGCACATGCTGACAACAGCGTAGGGAG
AGTTTGGGAGCTTCTTTTGGGAGGAGGAAGTATGCTGTCTCGAGGGCCTG
GAGCGGCCCGAGGGGTGGTCACCAGGGCGCGACCGCGCAGGTTTGATACG
GACCCTGACGCCACCCACGCCCGCGGGTCTACGCTACCCAGCCCGTCGGA
GAGGGTGGTGATCAACGTTAGCGGCCTGCGGTTCGTCTCGACGCTGCAGA
CGTTAGAAAGGTACCCGGACTCGCTGCTAGGCGACCCGCGCAGACGACGG
TGGTATCACGATCCGAGTCGGAACGAATTCTTCTTCGACAGGTAAATGCA
TGTATATGACACACTCATGCACCTGTTCCGAACACCAGGGAATTATGTGT
GAATAAGCTAGATAAGAAATACACCTTTCCTTATTGAAACTGTAGGTTCA
AATGTTACTTTCTTTGTAGACGAACAAGAAATGTTGTTTGTCATATCATC
TAGATACAGTTACAGAAAAATCGTTCTCATAATAGTGTTAACATTTTGCC
TTGTACTTTTGTTTCAAATGATCTGTTTTCAGTAATGCTAGCGGGCCTAC
TTGTTTTACAGGTGTTCATGAAAAATTGATTTTTAATCTCACTAATGAAT
ATTTAAATGCTAGTACTGTGTACAAGGGGATGCACTGTACTTGTAAATCT
TCTGCGGCGTTATTGGCACAAATAAATTCCAGGCATGTATCTTAATGATT
TTTAACAAAAGCATCGAACTTCGTTATCTGCATTGGACGTTGGACAGTTT
ACATTCCACTGCCGCTGCAGAAAATACATTGGACAAAACAATAGCTGAAG
CAGAAACACCTTTGATGTAGTTGTCACTCAACTCCTATTCGTTTCTCTCT
ATATATAAGTATTTACATGTATTACATTTTTGTCTACCGTCTGTTAGGCC
ACACTGACTTGATAATTTGGATGGCATCCGCGCGCTTCAAACTTCGTCCG
TTTTTTAAAACAATGTTTGCAACTACACTATAACTCATAAAAGAAGCTGC
AAAATGATCACATTCATGCCGTAAATGGCACAAGAATATCGGAAAACGGA
TACTGAGGTATAATGCCATTTATAAAGTCAATTCCAAAGTAAAAGAATAA
TATATGAAAAAAGATAAAGAATTCTATTGTTTGGTATAACATTAAGTTAA
TACATGTATGTATCATAAATGGACCCATAAAGAAGGATCGCAGGTGTGTG
TGCCTGTGCGTTGTGTAGGGGGGGTGGGGGTGTTAACAGGTAAATATAGG
AAGGCTGTTGACTGCATTCATGAAAAACTATATTCAAGCTGCTGAGAAAG
GGGAAAAAGTAACAGTCACTTATCGGTTTCTGAATGAATAATCAATAATA
TGTCAGTTATCGGTTTCTTCTGAAAGCATAGTCAATACTAGTATATTTAG
ATCGTTCACTGTTCTTTGCTGTTTTCGGTGAAAAGTGCTCTCTCTACATC
ATGTTCTAGTGTCATACAGTACAGCTGTCAAGTACATTTTCAATGCTTTC
CTCTCCTAGACATCGCCCGAGTTTCGAAGCCATCTTACAGTTCTACCAGA
CCGGCGGAGAACTCAAGTGTCCTCAAGAAGTGCCCTCGGACGTCTTCGTG
GCCGAGATGGAGTTCTACGACCTCGGGGAAGAAATGATCAAGGCGTAAGA
TGGATAGGTAGTCAAAATGGGGAGGGTTACGATCGTCCCTCCATGCATCT
GCTTGGAGATTGCTAGATTTGTCAGATTTGTCATTTTTATAGCAGGCAAG
GTCACGAGGGTTAACATGGGTCAGAAAAATACTGTAGATCTTTGAATGTT
CGCGTGGGGTTTATTTTAGCGGTTTTGCTATTTTAGCGGCTTATATATTT
TCCATTCTTTACTATCATGTTTAAACCGCGAACTTAAAATACAGCAAAAA
GACTCTCCGCGAAAGTAATTGAATGAACACGTAAACGAGCTTTACGAGCT
TTGATGATAAACAAGCTTACTTCTGTAGTGCATGGGGTTAAAGATAATGT
TTTGAACAATGAACAAAATAGGACTGTAAAAGATGGACATGACATTGAAT
ATCGATAATAGGCTTTTAATTCATTCAATTTATCGATGAATTGATCGTAG
CATGCGGAAACAGAACATGATTAACATGTGTCTGTCCAGTGATACATCAC
GCAACTACCGATGACTTGTTCCCAGGTTCCGAGAGGAAATGGGCATGGAA
CTGCCAATGCCAGACGAGATTCCGCCCCCTGAGGACGAGATGCTGCTGAA
AATTTGGCGCCTTTTCAGGGACCCGAGTTCATCCTTCTTGGCCAAACTGG
TCACAGGTCGGTTGAGCATGGCTCTGATTGGGGCAATAGTCTGTCTGTGC
TATTGGTTGTGAACACATGACGTCATAGACACCATGCAAGTTGATTGGTT
GTTAATACATGACGTCAGAGACACCATGCATGTTGATTGGTTGATTGGCT
GAGTCTAGAAGTTCAAATCAAACTTTGCCAGGCCCCTTTCAGGTTTAAGC
ATCCAATATGGCGGCAATTGCTTACGTCATAGTCACGTGAGTGTAACCCC
CCATATCTAACCACAGCAATAAGGAAATGGCAACGTGTGATTGGCCAACG
TTGACCAATCGGATGGCTTCATATTAAGCCGCTACACTCTCGCCCATTTT
TGGTTGTCTTTTCTTTGACCAACCATAACCACATGTGTGACATGTAAACT
GGGGCTTTAGAGTAAAGTAAAAGAAGAACAACAAAATAACATTCGTAAAA
GTCTGTTTGGAATTCCCGCCCTTTAACGGTGAACTTTTGTAGCGCAAGGG
GTTAAAAGAAAGCGTTTCGAACAATTAGAAAGGACCGAACAAAAACAAAA
GGAACGTAAAGAAGAACACAGAAATTGAATACCATGTTAGCGTTAGGCTC
TTTGTTTGAAAGAGTGATGAAACGCCGTGAGTTCGAGCGCGTGAAATTAA
AATGCGTCTTTTAAAGTTCAGGACAGCCCCCGTTAGTGATCACCGCATTC
ACGACTAACTCCCATCCATGGTCTGGAGAACGTTGGGAGGTCATAGTCGG
CTATGCGGTACAGGGGCTTTAGTATGGATAATACTGTTACTCTACCCCCA
CCACGATGCAGTGACCTCTGTGCTGATGATTATCATGAGCGTGTTGGTGA
CGTGTATGGAGACCGTGCCGGACGTGCAGACCTGGGTTCACGCCTACAAG
TACAGGAACGACACCAACGGAACCCTGGTCAGGCTACCCCGCACTAGGAA
CCCGTTCTTCGTGGCAGAGACCATCTACGTGGCTTGGTTCACACTGGAGT
TGGTCTTAGGTGATTTAATTTAAACATACATGCATTATAAATGTGTCATT
TACCGTAGTGCTTAGAGAGAGAGAGAGCAGGGGAAAGAGAGAGAAAGAGG
GAGTGAGAGAAAGGGAGAGAGAAAGAGAGGAGGAGAAAGAGAGGGAGAGA
GAGAAAGAGAGGGGGAGGTAGAAAGAGAGAGAGAGGGGGGTGATGGGTTA
TGTAGAGAGCACCTTGTATCTTGTTCAAAAAATTAAGAATGATGAGGAGA
AACGATTTTGATGACAGTTGCTAAAATGATAAGAAAATCAACCAATTTCT
TACCACCCAGTTCGTTCTTTCTAAATGCAACATCTCTACAAAGGTATGTT
TTTCGTTGGTGGTTTGAACGTAGGTTAAGTCTCTTTACACATTATTCTTT
TTCCTCACCTCAGGTTTTCTGGCATGCTCGGATCGAGTCAGGTACAGCAA
AGACTACATGAACATCCTGGATTTGGTGGGCATCATTCTGTACCTGGTGG
ATGTGTGCATAGAGATCAGGTAAGGATGGCGACTGTCTTTGACGTTTGTA
AATGCAGCTAGGTCACTTCATGCATTTATTGGCCAAGTAGCTGCTTTGCT
TCGCCCTTATCTTTTGGGCGGCGCTCTTGGGAAAGATCCTTTCGGCGAGA
AAAACTTCTATGAAAAACTCTTTGGGTCTCTTGCAAAAATTTGTTACATC
GGCAGAGTACACTGGATAAAACAACCCTTGCCAATCACTAGCCTGAACTC
AATCAAGCTCCTGTAACGGCTTGCTGCCCTGTAACCGCATAGCCGCGGGG
AGGGGACAGAAATCCCCGGACAGCTGGAGTTTGCGTTATACAGACTAGCC
AATCACATGTACAAAATTGTAATATCAAGTACAGCGTTTTCCTTTACAAA
GTTCTTTCCTTTTTTAAATGCCGACACGAAAACAAACAAACCGAGGCTTG
AGTGCGCCAGCCCACCGCTACCTGTTGTCATAACATGTGGAAATAAATGT
TTCAAAAAAGCTTACATTCCGTTTTCTGCTAGCACGGTGAACACAGATGG
TCAGATTGACCGCGTGGTCAGCGCTTTGTGGACAGCGCGTCTCATCCGAA
TCCTGCGGGTGGTCAAACTGACGCGCTACTCTGTCGACATGCAGCTGTTC
TGGAAGGCCATGGTAGGGGGCGCTCTTTCAATAGAGTCATTACCGTGTAT
AGCCTCTACCAGGTTTCAGAGGCGACTGGAAAGAGTAGAAATATTCGGCC
AATTTGTACTCTTTCTAACCACCTCTCTTGAAGCCTGGTAGAGGCTATAC
CATGTGCACTGAGCACCATATAAACCTTAAGACTAAGAACTAACATCTGT
TTGGAGAGATATTAATCCTTTACTATTGCCAATAAGAGAAGAAAAGTTTT
GATTCATTATCATTGCCAAGGTCATGTTTTCGGGTTTGTGTGTGTATGTC
TGTGTGTGTGCATGTACATGTGTGTGTATGTATGTGCTTGCGTATGTTCG
TGTGTGTACATGTATGTGCGTGTATGTGTGCGTGTGTGTATTTTCATCTG
TATTTGTGTGTGTGTAAATGTACTAAGTATGTGCATGAATGTACATGTAC
ATGTGCATGTGAATGTGTGTGTGCCAGGTCAGCGGCCAGATGTCACTGTA
AACATCTTGTGGCAGGTCATAAACCCTTGATCAACTATTTGCACCACGAC
TCTTCTTGGGATAGTAAGCATTTGAAGATTTCCCGTTGAATGGCATCTCT
CATTGGCTAAATATAACTCCTCTCCTCCAGACCAACAGCTTGCCCGCTAT
GGTCCTCTTCACTTTCACCACCATGGTGCTGATGGTGGTGTTCTCTGGCA
TCGTGTTCTTCTGGGAGTCCGAGTATCCCGACACCAAGTTCACCAGCATC
CCCGACACTTTCTGGTGGGCCATCATCACCATGATCAACATCGGCTACGG
CGACCACATCCCCCAAACACTGGTGGGAAAGATAGTTGCGAGCGTCGCTA
CCATCGCTGGGATCGTTTCGCTGTGCCTGGGGATACCCGAGTTTATGGAG
TGTTATATACAGCTGTATGAGGCAGCCAGGTATAGTGCAAAGAGACAGGC
CAGGCGTAGGTATGGAATGATGTCCAAATATGGGATGCTAGGAGGGAATA
AGTCACCTTTTTCGAGGAAGAGGAGAAGGGATGGGAAGTTCACTCTCATC
ATATAATTGCAGATAGACCAGCGACACAGCTGAAAGATGTTTATTGAATA
TGTTAATCTGTCTAAAAATCCC Coding sequence (CDS) from alignment at Sc0000000:3960232..3966153+ >BlTCONS00000562 ID=BlTCONS00000562|Name=BlTCONS00000562|organism=Branchiostoma lanceolatum|type=CDS|length=1515bp|location=Sequence derived from alignment at Sc0000000:3960232..3966153+ (Branchiostoma lanceolatum) ATGCACGCTTGGTCACAAACTGCAGTTTCAAATCAAAGAAAGAAACAGAG ACAGCGTTCACCCGGAAGGCGTGCACATGCTGACAACAGCGTAGGGAGAG TTTGGGAGCTTCTTTTGGGAGGAGGAAGTATGCTGTCTCGAGGGCCTGGA GCGGCCCGAGGGGTGGTCACCAGGGCGCGACCGCGCAGGTTTGATACGGA CCCTGACGCCACCCACGCCCGCGGGTCTACGCTACCCAGCCCGTCGGAGA GGGTGGTGATCAACGTTAGCGGCCTGCGGTTCGTCTCGACGCTGCAGACG TTAGAAAGGTACCCGGACTCGCTGCTAGGCGACCCGCGCAGACGACGGTG GTATCACGATCCGAGTCGGAACGAATTCTTCTTCGACAGACATCGCCCGA GTTTCGAAGCCATCTTACAGTTCTACCAGACCGGCGGAGAACTCAAGTGT CCTCAAGAAGTGCCCTCGGACGTCTTCGTGGCCGAGATGGAGTTCTACGA CCTCGGGGAAGAAATGATCAAGGCGTTCCGAGAGGAAATGGGCATGGAAC TGCCAATGCCAGACGAGATTCCGCCCCCTGAGGACGAGATGCTGCTGAAA ATTTGGCGCCTTTTCAGGGACCCGAGTTCATCCTTCTTGGCCAAACTGGT CACAGTGACCTCTGTGCTGATGATTATCATGAGCGTGTTGGTGACGTGTA TGGAGACCGTGCCGGACGTGCAGACCTGGGTTCACGCCTACAAGTACAGG AACGACACCAACGGAACCCTGGTCAGGCTACCCCGCACTAGGAACCCGTT CTTCGTGGCAGAGACCATCTACGTGGCTTGGTTCACACTGGAGTTGGTCT TAGGTTTTCTGGCATGCTCGGATCGAGTCAGGTACAGCAAAGACTACATG AACATCCTGGATTTGGTGGGCATCATTCTGTACCTGGTGGATGTGTGCAT AGAGATCAGCACGGTGAACACAGATGGTCAGATTGACCGCGTGGTCAGCG CTTTGTGGACAGCGCGTCTCATCCGAATCCTGCGGGTGGTCAAACTGACG CGCTACTCTGTCGACATGCAGCTGTTCTGGAAGGCCATGACCAACAGCTT GCCCGCTATGGTCCTCTTCACTTTCACCACCATGGTGCTGATGGTGGTGT TCTCTGGCATCGTGTTCTTCTGGGAGTCCGAGTATCCCGACACCAAGTTC ACCAGCATCCCCGACACTTTCTGGTGGGCCATCATCACCATGATCAACAT CGGCTACGGCGACCACATCCCCCAAACACTGGTGGGAAAGATAGTTGCGA GCGTCGCTACCATCGCTGGGATCGTTTCGCTGTGCCTGGGGATACCCGAG TTTATGGAGTGTTATATACAGCTGTATGAGGCAGCCAGGTATAGTGCAAA GAGACAGGCCAGGCGTAGGTATGGAATGATGTCCAAATATGGGATGCTAG GAGGGAATAAGTCACCTTTTTCGAGGAAGAGGAGAAGGGATGGGAAGTTC ACTCTCATCATATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000562-exon-Sc0000000-1564993656:3960232..3960872 | BlTCONS00000562-exon-Sc0000000-1564993656:3960232..3960872 | Branchiostoma lanceolatum | exon |
BlTCONS00000562-exon-Sc0000000-1564993656:3962091..3962225 | BlTCONS00000562-exon-Sc0000000-1564993656:3962091..3962225 | Branchiostoma lanceolatum | exon |
BlTCONS00000562-exon-Sc0000000-1564993656:3962757..3962887 | BlTCONS00000562-exon-Sc0000000-1564993656:3962757..3962887 | Branchiostoma lanceolatum | exon |
BlTCONS00000562-exon-Sc0000000-1564993656:3963693..3963890 | BlTCONS00000562-exon-Sc0000000-1564993656:3963693..3963890 | Branchiostoma lanceolatum | exon |
BlTCONS00000562-exon-Sc0000000-1564993656:3964295..3964400 | BlTCONS00000562-exon-Sc0000000-1564993656:3964295..3964400 | Branchiostoma lanceolatum | exon |
BlTCONS00000562-exon-Sc0000000-1564993656:3964914..3965043 | BlTCONS00000562-exon-Sc0000000-1564993656:3964914..3965043 | Branchiostoma lanceolatum | exon |
BlTCONS00000562-exon-Sc0000000-1564993656:3965662..3966153 | BlTCONS00000562-exon-Sc0000000-1564993656:3965662..3966153 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:3960232..3966153 + |
Properties
Property Name | Value |
GeneID | BlCUFF000298 |
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