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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3412445..3418990+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000453 ID=BlTCONS00000453|Name=BlTCONS00000453|organism=Branchiostoma lanceolatum|type=mRNA|length=6546bp|location=Sequence derived from alignment at Sc0000000:3412445..3418990+ (Branchiostoma lanceolatum) CTCTCGTCCATAGACCATAAAAGGGAATGTCAACTCTGACCCCGACGACA
ATAGGGCCCTAGGGAACGTGCGTGCCCCCTCGAGATATTCAAGTAGAAAG
TCTCAACTCCGACAAGTGGTTTATTGTTGTTCCCAAAACAAGGTGAGCTT
TACAGGTCTTTTGTTGGCGTTGGTTAAAGATAAACGCTTGGACGGTTTTC
AGTACTGGTAGAAAAGGATAAGTAAGTAGAGGTAGCCACTTACCAAACAC
AGGTGAGGCTTTTTACAGTATTCGCAGCGTGTAGCTATCGCTTGAACCTT
GACATAAGAATCAACCTTGTCGAGCAAGTTGTACACATTCAAGGGAGCTG
AATAATAGTTACATACTGTCTTTAACATGACATGATAACTCAATGATAAG
TTAACCTTTTTGCTAAGTGTTTTTTTTACTGTCGTTTCCTTGTAGCGCAA
ATGCTTCAACTCAAATCCCTTCACTGTCGCTAACAACTGATATACAATAT
ACAAGTTTTATTACAACAACGGTGCATGTAACTACAATTCATAAAGACCT
ACGGGCAACCAGTAAGCTTACAAGAACATGGGAGGGAGGTTTAAAAACGA
TAGGTATCAGAATTGTGTTTTACAGTCTTTTACTGAAGGCGTTGCCTCAA
ATTGCTTCGTGCTTTCTCAACCGCCACTATAAGGAAACGTTCCCAGAAAA
ACCCCACATGAGTCACATAAAGGAAGTAAACAGTGCATGACAGGGTGTGT
CACGTGACGCGTCAAGAAATGGCGGAGACTTAAGACATGTTAACACCTTC
TTTTGTACAATGACAAAAAGCATCACGTATACTTCGTAAAGCTGAGATCA
AGATGCGTAACATATTTGCAAACCAGTCTCAGATGACATAATAGGTTAGT
GGGGAGGGGCGTGGTTGAAAAATGCATCACATATTCTTTGTAAAGCTGTG
TATTTTTGAAATCAAAATGCGCAACAATTTGCGGACCATAATAGTGGGGA
GGGGGTGTGTTTGAAAAATGCATTACATATTCTCAGTAAAGCTGTATGTT
TTCGAGATCAAAATGCGCAACTTCATTTGCGGACCAGTCTATGCCATGAT
AGGTTAGTGGGGAGGGGGGCGTGGTTGAAAAATGCCCACTAAAGTTAAAG
TTCAGCTCAGGACAGGTATGACACATTGATTTCGTCTCAATTCTAGATAT
ACGCATCCTACGTCGTTAAACACTATCCACTAAGTCTTCTTTAATCATAC
GTGACAGTTTTGTCGTGGCACTACAGTCTATACAGGCCAATTTTCAAGGA
CCAGTCGTCTAAGTGTGTGTGTGAACAGTCGCCTATTTTTGAGTTCGCGC
CAATGTTGTTTCAGGAACAATGTAGCAAATGAATGGAGTGTTTACCTTTG
TGAAACACAACCACCGCCTTGTAACAAGACCCGCGGTGCTTGAAGCGTTA
TAAATAGCTATAGCACAGAGAAACCTCGCTGTAGGGTTAAGAATAAAAAC
TAGGACAGAAACTTTCAGTGAGTGATTGCTTATGAAAAGACAGATTAAAA
CACCTGCTTAGGTTATGAATGATTGAAGCCGTCGTACATGTTTCTATTGT
CATAATATATGTTGCCTACTTCTGTTGTCGCACGACATTGTGTCTTAAGA
ATGCTAACAACAAAAAGTGCTATCTGTTCGTTGAAGGGATTATGTACATG
TATACGTACGAACTTCTTAGGGCAAGCTAAAAACGTGTGTTAAACTTCAC
CTCAAGACTGACCGTTCATTGTATGTCAATCAAAAACTGTCACGCACTAT
CCCCGCCACTTTGTCGTGAAGAAAAACACTTAACAGGTCTCTTCTTGTTG
TTCAACCCGTTCAGGTTTACTTGATCGCCGACTTCCTTCCACAAAATTAC
GTCACTTCCTCACTTCCACCACGGCTTGTCCCGCCAGCACACCTGGCCAA
GGAGCGGCCATGGACACCACCAACTTACAGAAAATCCGTGAGGAGCTCTT
GTCCTGCGGGATCTGTCTTGAGACGTTCACGGATCCAAGGGTCCTGCCCT
GTCAGCACACCTTCTGTCAGAACTGTATCAAACAGATCAGCGCAGACAAG
CGAATCTTCCGATGCCCTACATGTCGAGAACAGGTCATACTCCCTAAAGA
TGGCGTCGAGGGGTTCAAGAAGAATTTCGAGATCGCCAGTTTCTGTGAGA
AGTTGGTGCCGGTTGCCAAGAAGCCGCCTCCGCCGATAGCTGCAAAGCCG
CGCACGGGAGACAGGTGCGGGACACACAAGAAGGAGGTCCGCCGCTTCTA
CTGCCAGCAGTGCAAGGTGGCCATCTGTAGCGAGTGCATTCTTGACATCC
ATCAGGGGCATTCTATATGCAGCGCGGCTCAAGCGGCAGGTGGCAGTCGC
GACCGGATTGGCGCAAATCTGAAGACGTGCAAAGAAAGAATCAAGATCCA
CGAAGACGTCTCTAGCGGCGTCTCTGACAACGAGAAGAAGCTTGACGCCG
AGAAAAAGGCGGTAGAGAGCACCATACGGTCTTACCAGCAACAGTTGATC
GACGACATCAACAAGACGGCAGCGGTTTTACTTCAGGAGCTCGAGAGTCA
CTTCATGACGAAACAAATGCGTTTGATAGAGCAGAAGGACTCGGCACAGA
GCACGCTCGACGAGGTGTCGGCCACACGAGACTGGGCGGAGAAGAGATTG
GAGTTCACCGAACCAGAGGTCATTGGGATGGAGGACGCCATTTGTAAGAA
GTTAGAGGCTGCCATAGCAATGAAGGAGTTGAGTGCGGACTACATTTCGC
TGGAAATGGACTTCCAGCCAGCTATCACTCCAACAGGGAAGGCCCTCCTA
GGACATCTGAGGGAGAAAGGCTCTAACAAGGAACGACAGAATAGCCTCAC
GTCTGCAAATGCGACACCGCCAACGGTCATGAGAGGTATCAACCCTAACC
AACCGGTACCAGGTCTAGTCTTCTTCGGACACGAAGGTTCGGGAGAGGGC
CAACTAGCGGAACCCAGAGGAATGACAGTCACCCCCGAGGGACGCATCTT
TGTCATGGACGGCTGTAGTGACATAGAAGAAGGGGAGATTAAAGAGTACG
ACAACGCCGGTCAGTTTGTGGGGAAGTCGTTCCAGCCGCACTACTTCCAT
CTCGCCGCGGACAGGTATGTGTTTATTCAGTATTACCTTCGCCAAGAAGG
TTGTATTTTCGGTAGCGTTTGTATGTATGTATGTATGTATGTATGTATGT
ATGTATGTAAGTATGCATGTAGAAGTCCGGCATAAGTCGAGAAGTCCTAG
ATGGATTGTATTGATATTTGGAAATGGAATGTGACTAGGTCTTGATGAGA
CCTGGATATGATTAGATTTTGGGTATCCTGTCGCCTTGTTACGGTACTAC
GTAAGAACTTCCTGTTTTGATATCTCGTTGCTGTGACTGACCCCCCCCCC
TTCAAACTGGACCCCTAGGAAAAATGGCCAAAGCCGACAGGGTATTCCAG
TCTAAAGATTGATTGATCGATTGGTTGATTGATTGATTGATTGATTGATT
GATTGATTGATTGATTGACAGCACGGGGCACCTGTTCTGCACGAGGCCGC
AGCAGGAGACGGTGGACGTGCTGGACAAGCTCGGGACGTGCGTACAGACC
TTCGGGAAGGGGCAGCTCTCCTACCCGATGGGCATCGCCATCCACCCGGT
GGGGGGTCAGGTACTGGTCACGGACACGCAGAAGTGCAAGGTAGGTTTTT
TTTAAAATCTTTTATTGCACCATCAATAACAACACATAATGATGCCACAC
TCGTGATGCAAAGCACACTCACTTGACACAAGAAGCAAAACATGTAAGGA
GTTTTTTTTGTCTCTATAACTCTATGACAAAAAAAAGATGATAAAGTAGA
AAGCCCGACAAAAACGCCTAAAACACGTCAAAAACCAGCCGGACCCACTC
TTCTACTTAGCAGTATGTCTATATGGCTACAATGCCATATGCTTGTCTGA
AAGTACTTACAGAGTTAACGAGGTAGTGCTTATACAGGTTCTGTCAATGT
AATTAACAAATTGATATGTTCTGGGGGAAGTGAGAGACAATGTATCATCT
GAGGTCATCAGACCCGAAGATTGAGGTACAGAAGATCGCCGTTTAATGCT
CCTTGTCCTGCTTGTATCTGTAGGTGTTCATCTACCAGCCTGACGGCCAG
CTGATCCGGCAGTTCGGCGGCAGCGGGCGCGGAGACCACGAGCTGTCTTA
CCCCATATCTGTAGCCGTCGATTCGGCGTGGAACATCTTCGTGTCCGACC
ACGACAGTCACTGTGTCAAGGTACATATGAGGCTTTCGTGATGCATCATT
GCTGGTAGCCTCTACCGGCAGGCTCTAGAGGTGGCTGGAAGGTATTCTCC
AAGCAGAGGTTTCGATCGGGGGCGCAAAAACGGGGGTCCAGAAACAAACA
AATAAACACACAATCACACAAACGGGAAGGTGACAATCGTACGACAAATG
TAACTGTGCCTTGGAACATTGATGATGTCACCGACAATGACTGCGCTCTT
GTCTAGTCATGGACGTTTGTTTTTCTTTATCTTGTTGTGATTCCAGGTGT
TCGCAATGATGGGGACGTTTCGGCTTAAGATTGCTAAGAAGGGCAGCAAG
GATGGACAGCTGAAGAATCCTAAAGGTGAGGCTGTAATGTTATGGAATTC
TAAAGGCGGTATAGGTTATAAACACGGTGAATGCCATTTCACATTTAACA
GGCATGCCAAAGTTGCTAACGGTCTAGTTTCTGCTTTGAAAATGAAATGA
ATCCACGTTGGCTGTTTATAGGAACTGAAAACTGGTACTAGAATCTTATT
ACGATATATAAGATGTACTACTGGTAACGTTATATACAATGTGGTGTCTT
GTATTACCTGCAACCAGTGCAAGGGAAGAACAATTCAACTGCAATAACAA
TATTGTCGTATCGTAGTTCTTTCTGTTTAGTTATCGTCTGAAGAAAGTTT
TCAGTACTCACACGGAGTCCCATTTTCTCGAAAGACTCATACTGTTATAC
AGTACTGTAGTCGAAGTATTGAATACAGTGAAAACTATCCCGGATACGTT
GACCTACTCGCCGACATACTCCCAACCACAGCCAGTGATCTTGCTCACGA
TAACTGTCCCAACTATATTCTGGAGAAGTTCGGGAGGTCAAGGTCGGCTA
TGCTTGACAGGAACTTTAGGGATCTCTAGGGAGAGTCTTTAAAATCTGAC
GTTTCCATGACAACGTTTCTCATACAGGAATATGCCTAGACGCTGAAGGG
AACATCATCGTGGCAGACAGTGGGAATGGACGGGTTTCCATGTTTGACTC
GCACGGCAAGTTTTCCCGCCACCTGCTGACCTCTGACCAGGGCCTTGGAC
ACCCCAGTCAAGTGACCTTAATGCCCGACGGCCGATTGGCGGTCATGGAT
ATGGAGGCCAACCGAGGGCTCATATTCCATTACAAGTCTGACCAATGAGA
GCACTTGTTTCATTACATGTACAGGGTGTTTGCACTCACGTGGCTGAGTG
ACGTAGGTATTATCCGCCATGATGGTTGGTTGAAACTGGATGACGTCATG
CACATTCAAACTTATAGGTCTCATTCTTCCAGGTTTAATCAACATGGCGA
CTGTGACGTCATAGACAAGCTTCACATTCAAACGTCATATGAACACTGCA
AAAAAAAAAATTCTTTAGCCTGCTCTTTGGGCAACCAAAAATAAAACGGT
GACTTATACGGTAAGAGAGCTCTTTGGATTCAAAAGGGCCCTAAAATTGA
ATTATATAGAAGTACTAATCCTTTAAGCTTCTCTGGTGTAATAGGACCAG
TGAATCGGTGGTCTCTTCGTTTAATAACATCATATGCCATGATCTAACAT
TTCATGTAGAACGCGTTTTATCAGGTACGATTGGTATGAAAGGTACGAAA
GAGTGTGTGTATTGTTTTATTATATCCAGCCATCTTACTAGAAGTATAGA
CAATTGCAGCAATATATGTATACGTACAAGGTATCATGTAGCGCATTAAC
AGTAACTTATATAAAGAGGCAATATTTCTCTCAGCTTGTTACTTATAAAG
CTCTCCTCAATAGATATTCACTGCACTCTTTAAAGTTTAATCTCCAAGCA
CATCTATCGGTGGCAAGGCAGTATCAAAATGGCCAACGAGTATCCAAAGC
TGGCCCTTTTGATGCTGCCTTGCCACCGATACTGTGCTTGGAGATTATGT
TCTTTTAACTGGTGTTGGTATGATAGAGTGTTTTATACGCAAATGATTTA
CACGATGTAATACGTGTCAATAGTATGATACATTTTGATACCCATCCAAA
CATTTGAAGAAGAAAAAGAGAAAATCCTGCACATAATTGACACGTTCTCT
GTGATTGTTTCTTTTCTAAGGCTTGTATCGGGTGTCGTTTTTTTAACAGA
ACTTGACTGTGCAACACTGAATACAAGAGAGAAATGTACATATCAGTTTT
CAAGTTCCTATTATTGTAATAACAAACGGTCAGTTGTAGAGTGGTA Coding sequence (CDS) from alignment at Sc0000000:3412445..3418990+ >BlTCONS00000453 ID=BlTCONS00000453|Name=BlTCONS00000453|organism=Branchiostoma lanceolatum|type=CDS|length=1821bp|location=Sequence derived from alignment at Sc0000000:3412445..3418990+ (Branchiostoma lanceolatum) ATGGACACCACCAACTTACAGAAAATCCGTGAGGAGCTCTTGTCCTGCGG GATCTGTCTTGAGACGTTCACGGATCCAAGGGTCCTGCCCTGTCAGCACA CCTTCTGTCAGAACTGTATCAAACAGATCAGCGCAGACAAGCGAATCTTC CGATGCCCTACATGTCGAGAACAGGTCATACTCCCTAAAGATGGCGTCGA GGGGTTCAAGAAGAATTTCGAGATCGCCAGTTTCTGTGAGAAGTTGGTGC CGGTTGCCAAGAAGCCGCCTCCGCCGATAGCTGCAAAGCCGCGCACGGGA GACAGGTGCGGGACACACAAGAAGGAGGTCCGCCGCTTCTACTGCCAGCA GTGCAAGGTGGCCATCTGTAGCGAGTGCATTCTTGACATCCATCAGGGGC ATTCTATATGCAGCGCGGCTCAAGCGGCAGGTGGCAGTCGCGACCGGATT GGCGCAAATCTGAAGACGTGCAAAGAAAGAATCAAGATCCACGAAGACGT CTCTAGCGGCGTCTCTGACAACGAGAAGAAGCTTGACGCCGAGAAAAAGG CGGTAGAGAGCACCATACGGTCTTACCAGCAACAGTTGATCGACGACATC AACAAGACGGCAGCGGTTTTACTTCAGGAGCTCGAGAGTCACTTCATGAC GAAACAAATGCGTTTGATAGAGCAGAAGGACTCGGCACAGAGCACGCTCG ACGAGGTGTCGGCCACACGAGACTGGGCGGAGAAGAGATTGGAGTTCACC GAACCAGAGGTCATTGGGATGGAGGACGCCATTTGTAAGAAGTTAGAGGC TGCCATAGCAATGAAGGAGTTGAGTGCGGACTACATTTCGCTGGAAATGG ACTTCCAGCCAGCTATCACTCCAACAGGGAAGGCCCTCCTAGGACATCTG AGGGAGAAAGGCTCTAACAAGGAACGACAGAATAGCCTCACGTCTGCAAA TGCGACACCGCCAACGGTCATGAGAGGTATCAACCCTAACCAACCGGTAC CAGGTCTAGTCTTCTTCGGACACGAAGGTTCGGGAGAGGGCCAACTAGCG GAACCCAGAGGAATGACAGTCACCCCCGAGGGACGCATCTTTGTCATGGA CGGCTGTAGTGACATAGAAGAAGGGGAGATTAAAGAGTACGACAACGCCG GTCAGTTTGTGGGGAAGTCGTTCCAGCCGCACTACTTCCATCTCGCCGCG GACAGCACGGGGCACCTGTTCTGCACGAGGCCGCAGCAGGAGACGGTGGA CGTGCTGGACAAGCTCGGGACGTGCGTACAGACCTTCGGGAAGGGGCAGC TCTCCTACCCGATGGGCATCGCCATCCACCCGGTGGGGGGTCAGGTACTG GTCACGGACACGCAGAAGTGCAAGGTGTTCATCTACCAGCCTGACGGCCA GCTGATCCGGCAGTTCGGCGGCAGCGGGCGCGGAGACCACGAGCTGTCTT ACCCCATATCTGTAGCCGTCGATTCGGCGTGGAACATCTTCGTGTCCGAC CACGACAGTCACTGTGTCAAGGTGTTCGCAATGATGGGGACGTTTCGGCT TAAGATTGCTAAGAAGGGCAGCAAGGATGGACAGCTGAAGAATCCTAAAG GAATATGCCTAGACGCTGAAGGGAACATCATCGTGGCAGACAGTGGGAAT GGACGGGTTTCCATGTTTGACTCGCACGGCAAGTTTTCCCGCCACCTGCT GACCTCTGACCAGGGCCTTGGACACCCCAGTCAAGTGACCTTAATGCCCG ACGGCCGATTGGCGGTCATGGATATGGAGGCCAACCGAGGGCTCATATTC CATTACAAGTCTGACCAATGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000453-exon-Sc0000000-1564993656:3412445..3412586 | BlTCONS00000453-exon-Sc0000000-1564993656:3412445..3412586 | Branchiostoma lanceolatum | exon |
BlTCONS00000453-exon-Sc0000000-1564993656:3414309..3415608 | BlTCONS00000453-exon-Sc0000000-1564993656:3414309..3415608 | Branchiostoma lanceolatum | exon |
BlTCONS00000453-exon-Sc0000000-1564993656:3416016..3416184 | BlTCONS00000453-exon-Sc0000000-1564993656:3416016..3416184 | Branchiostoma lanceolatum | exon |
BlTCONS00000453-exon-Sc0000000-1564993656:3416618..3416764 | BlTCONS00000453-exon-Sc0000000-1564993656:3416618..3416764 | Branchiostoma lanceolatum | exon |
BlTCONS00000453-exon-Sc0000000-1564993656:3417041..3417119 | BlTCONS00000453-exon-Sc0000000-1564993656:3417041..3417119 | Branchiostoma lanceolatum | exon |
BlTCONS00000453-exon-Sc0000000-1564993656:3417722..3418990 | BlTCONS00000453-exon-Sc0000000-1564993656:3417722..3418990 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:3412445..3418990 + |
Properties
Property Name | Value |
GeneID | BlCUFF000236 |
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