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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:3335844..3341659+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000442 ID=BlTCONS00000442|Name=BlTCONS00000442|organism=Branchiostoma lanceolatum|type=mRNA|length=5816bp|location=Sequence derived from alignment at Sc0000000:3335844..3341659+ (Branchiostoma lanceolatum) CATCTCATCCAACCAACCAAGCAGGGTCTTAGGTTAGTGGCAGCCAATCT
GTGTTTACGTTGCATTAAGCCAAGAGAAATGACTTACTAAAAAAACGAAG
GAGAAATCACTAAGACGAACTAAATTCTTCTTACTGTGATGCTTGGATTT
AAGTTGTAACTTGTCTGTTTATGCTTTCATCCTCAGGAAATCTTAGAAGT
CCCCATTTTCACATTGGATTTTCTAAAACTCTGTACTTTCCTCACGGTTA
CCTTCGCTCCCTTATATCACCCTCATACCTTTTTGAGAAAAAAACTGTAG
CCAATGACAGATCATGCTCATAAGATCTGATTAGATATAGAAGTCAACGA
ATAATGTATCTGTTGCAGATTATGACTACTCCAGTGAGAGTGACCAGGAC
CCTATCCAGGTGGACCAGGCGTGGAGGGGGGATGGAGACAGTGATGCTGA
GAGCATCGACAGTGAACAGGAGGACCCTCTCAAGTAAGTACACAACTTTT
ATGAACCCACTGTGAACCAACCCACTTGACCACTGCCACTTAGAACCCTA
TTTTAGAAGTAGACTTAGTAAGTAGTTTGGTTGCCTCACTGGTGCTAAGA
GTCCAGGTCCTGGAGGTGACAGACCAAATATGAAGCTCCCTTTATAGCAT
AGAAAAAGCAAGAACGTCACCACAACTCAAGCTCAGTTCACATGTCAATG
AAAATTCAGTTTACATAAATCAATGAAAATTGTAAAAAATAATTCTGCTG
TGAGATCCTAGAAGTTTTTTTTAATGGGTGTGGTGTGTAAAGGAAACTCA
GTTTGTGGTATAACATTGCTTTTCTCGATTTTATAAACAACTGTTTTCTC
CCCAGGCATCGTAGTACTAGTAATCACTCAGTCATCAGAAATATTGTAGA
GCCGCAAGGATATTTGGGTTTTCTTTCACAGAACCATGTTCTTTTTACAT
ACCAGCCACAATCTTCCTTAGGCCTTTAATGACTTAACCTAGAAACACCA
AGGGAATAACAAAAAGTGGCAACATTGGCCTGGTGGTCTTTACGTAGAAG
TGGTCACTTGTAGAGGTTTGACTGTATATCTGTTTTCTCCCCAGACATGC
TGGAGTGTACACGGCAGAGGAGGTTGCCCTGATCACAAGGGAGAAGTTGA
TCAGGCTGCAGTCCCTGTACATCGACCAGTTCAAGAGGTTGCAGCACCTT
TTGAAGGAAAAGAGACGCAAGTACCTCACCGCCAAGAAAATGGAGCAGGA
CATCCTTGGTAAGTCTTAAACACCCCTATTTGTTACTTGGGGTGATCTGA
TAACTGATGATGCTGTACTGGGCGAGTGGGATGTGCCAATGAATATGGGG
GTGTTAATGTCAGAAAATATTGGATGGCATCCAGCAACTTTGTTTTTGGA
AAAAAATTCCAAACCCGTTTATGTTTAAGTATATGTGAGTATTACTGTAA
ATTCGTTAATTTTCACGTTAGAAGGGGAAAGAGGTTTTTCACGGTGTGGT
AAGTTCTCAGTTGAAACAATTCTATGGTACAGTAGTAATACATGCTTATT
CACAATGGGGAGCTGAAAATAAAACCGCCCCAAATGTTTCAAGATTTACA
GTAATAGCGACAACATTGTATAACTCCAATAACTGTTTAATACTAATATC
TATCATAACAACCTTTATCTAAATGGATTTTTAAAAAAGGCTGATTTTTA
CAAGTATCATTGATGTTTTTTCTAGGCTCTGTCATTCCTTCTACTGACGA
AGACTTGGACAGCTCTGACAAGGAGAAACTCCGCACCCTCCGCGCTACCA
AGCGATATCGTAAACGCCACGGAGCCGAGGCGCTTCTCCAGAGCAGGTCC
AACGAGAGGAGGATCGCTGCGTCCGAGAGCCATCTGGTCAGCAAACCCAC
CCCTCCGCCGCGCTGTAACATCATTATAGACGGAGAGAGATGCAGCCACA
ACGTGGTGCCCATGTCCAGATTCTGTCTCCAGCGTATCCTTTTGGGTTGA
AGTTATTAGTTCAAATCCTCCCCACACCTTTCTGTGTGTAGAGGCAGTGC
CCATCTATGTTTCTATAGCCCTCAGGCCACAATATTAGTGGACTAGTCCA
CTGGTAGCCTGAATTCAATCAAGCCTCCTGTGACCGCTCGCCGTCCTGTA
ATCGGCTCCCAACCCAAGAGGGGAGAGAAACCCTCGGATAGCTGGAGTTT
GCGTTATACAGACTAAGTCCACTGGTAGCGGCATTTCTTTCATCTCCCAT
ACTGTTATCCACGAGGGCTGTGTACCTACTTGTGAACACCGGGCCTGAAC
TGAACTGGTCCAAGAAAGCCTAAACGTCTGGAAACAAGTCCGGACTTGCA
AAAAAAATATGATTTTAAACCTTCTATAGATCATGAAATATGCACTGGAA
AAAGACGAAAACATTGCTTTTTTTTTGTTTATTGCTGAACTTTAGAGCAG
CTAACTCATACATTGATAGATAAGGCTGTCCAGATGGTGGGTTGACCTTT
GATATGTGAACCTTAGCCTTTGTGTGAACCTTAACCCCTAACCCCCAGAC
GTCCTCCATGACCCACACCAGGTCCTCTTCCAGCACTGCTCCCACTCGAC
AGGAGGGATCGAGATCTGTGACAAGCCGGTTGCCATGGGGATGGACCGAA
CCACCTGTGTTCTACACTCACCCCTCCCTCCGCAGAGGTTCAAAATGCCA
GAGAAAGAGGAGGAAATGATAGTGGAGGTAGGGGTTGTTGATAACATGAT
ATCTTTAGACACTCCCTCACTCTCTCCCATAGCTTAGTCAGCTGTCGGGG
CAGCATAGCTTTCACTGAAGGCACTCCACTGCTGGTGGTCTTCCACCAGT
CTGGTCATCTGGTTGGCCGAATGACCGGTCCACTCCTTTAGATCTGTGAT
CCACGACCGACGGGGACGTCCCCGCGGCCGTGCACCTTCCGCTTTTCCCT
GAAGGATTGTGTGTGAGAGAGTGCCTTTTGCCCTAGTCACATGCCCAAAC
CACTTTTTTTTTAGACACCTTTCTGTTTAATTTGTTATTTTGAATACTAA
ATGTACTTCAATAGTGTAGAATACCAAACTTTGCAAGTAATCATTAATGA
GACATTCTTTATCCAAGGAGGTAAAGTCAGACATTATGCAGATTGATGTG
TCAAATTTTCATCTTTGTTTTCCTAAAACGAGTAGTTCAGGTACAAGTAC
AGGTCCAGACTTATACCTAAATCCATGTACCTGTAACTGTACCATAAAAT
TTAGTATGTACACAGCTTTAACGACGAGTTATTGCAACATCATTAATGAG
ACTCCTTTACTCAATCAAGGAGGTGAAGCCAGACGTTATGCAGATCGATG
TAGAAGAAGATGACAGCAAGCCTGTGGTGGTCACTGCTTCAGAGGGCAAG
GGTCAAACACGGGACCTAACAGAAGCTGCCACCATAAGTGGTGCAGAGGG
GACCAAGGAAGAATCATTGGGGAACCAGGAAACAGCAACTGTGGGAGATG
AAACACCAGCTACCTCCAACCAACCTACCACTCAGGCATCTCAACAAGTG
AGTATATCTCTCTATATTATGCAAATAGACAATGTATTTGCATAGGAACT
TTTCTTTCATAAACAACATATTCTGCTTTATACAAAGTAAACTACTGAAA
CAGGGTTCTCCCCAGAAATTTAGAGTATACCGGAGGAGGGTGCGAAGCAC
CCGAGGCGACGCGCCTTTGCGCGTCGCTGGGGGGTGGCCCGGAGGGGGGT
TTCCCCCCCTCCGGAGGAGGAAGCTTTGGCATTTGGGTTGTTTCAAGTTC
AAATGGAGGCCATTTCCTACAACTTCAGGTTGACTTCTTCCCAACAATCA
CAAACAAAAGAGGCAGGAAAAATCTTCAAAGTTCAAGCCAACACTATTTT
GAAAACACATATACTTTATTACATATGTTTCTGACATCATCTTGATGGCT
TTTGCTTAATCTTCGATTCATCCCTGTCACATAAACAGAAAAAAGCAAGC
TAACCCTCAATCTATGATACAAACTGACACAAAAATTCTGAATTTTTGGG
AAAAATTGGGCATAGGTTCCCCGCTATGACCCCTTACCGGGGGCCAACGG
TGCCATCAAGTTCAACAAGAAGAATAGTATACACAACTCCTAGTCATGTA
TTTTCTACTTGGAACTTGAGGCAAATCACAATGGGAAAAAGATGTGGAGA
ACATTGGGCAAAACCTTCTCATTTTGATATTAGTATTAATAATTTTTTCT
TCAAATTGATATGAATAACACATCAAAAACTATAAAAAAAAGAAGACAAC
AGAAACTTGTGCATTTTCTGATATACAGTCTGTAGAATGTAATGAATTTT
CCTGAAGAATTTCACACATCAAAATCCCAACATACACAAAAGTTTGCTGT
AACAGTGTAAGTGTAAAATCTCCAGCTACAAGTCTTTGCAATGGCCCCTT
TAGTCTGAGAATGGAATGTTCCATTCCTCCTGTAGAATTTAAGTGGATTT
GCATTTGTAGCCGCAGATTCAAACTAGATACAAATTGTATTTGACGTTCA
AAAAACCCATNAAAAAAAAGGGCAGAATTTTCGTCAGCTAGGAGACCATG
TGCTCCCAACAAACTGAACAAAGTTCTGCATTTTTCATTGCTTTTGGGAC
TAAAAACACACACCGAATGTTAAACAAAACCCCACACGATGTTTTCAAAT
GTAGTAGTGCTACAATGAACCAGGCATTTTCCTGCTGCTTGCCGATCTTG
ACTGAATTTTGAGGCACGCACTGGCGGTAAGGTGATTTTCTCAAACGTGT
ACTAGTACTACTACAGCTCCAAATAAATTTCTCATTTCTTTCTGACCCCG
TTGGCTGTGATTCATGAAGTAAATACAGACAATTAGCATTGTTTGCATGG
ATTTAGGGGAGTCGGATGCTAAACCAATAATGAGATTCTTTTGTCATCGG
CGTTGTAGCGAAGTGGTCCATTGTTTTTCGAGTATCCGATCCATTCACAT
GTACAAGTTTTTACAGACAATGCCGACGGAAAAAGTGACGCCGCTCGGCC
CAGAAATCTGCGTATTTTCATGAATTTTTGCCAGATTATCCAGGAAAATA
GGGAAGAAACACCCTAGATTTGAAAATGAGTATACCGGCGCAGAGCTAGG
AGTATACCGGCGGCGCGCCGTTGTTCCGTTGTCTGGGGAGAACCCTGACT
GAAACCTTGAAATGGTCGCAGTGGTGTTTTCGTGGTGACCTCTACTGGGC
AAATATGCCTTTCCAATGTACCATAAATCCATGTATTTTATGCGGGGAAT
TGATTTAACGGTAGAAGGGGAAAGGAGTTTTTCGCTGTGATTGAATTTTA
CAGTTAAAACAATTTTGTATCACAATATGAATACGAAACTCTTGTCATTA
TTCCATGGTAAGAGGTCTCTGCTAAAACAGCAAAAATAAAACCACTGTGA
ACATTTCAAGATTTACAGTATGTGTTTGCTAGCAGTCTTTATTTCATATG
TTTACTGTTTTTTGTCTGATTTCAGGATTCCATGGATACAAATGGCGAAA
CATAAACAGCGACATTCTCATCAGTTTGGAGAAGATGATAGCAAATCCAT
GATGTGTATACATATAAAATATATGGACCTACTTTGGCAAAGAAACTAAA
TAGAACCTTTGTTACTACAGTAGATTCCGTATATCTGTATAGCCTGTATA
TTATTTTGTTACCATACGAAGACCATATGCTTGTGTCGAATATATTATGT
TAATGAATACATGTATATTGTGTTCTCAATAACAAGGTTACAAATAAAGA
TTTTGTTTGAATGATA Coding sequence (CDS) from alignment at Sc0000000:3335844..3341659+ >BlTCONS00000442 ID=BlTCONS00000442|Name=BlTCONS00000442|organism=Branchiostoma lanceolatum|type=CDS|length=1005bp|location=Sequence derived from alignment at Sc0000000:3335844..3341659+ (Branchiostoma lanceolatum) ATCTCATCCAACCAACCAAGCAGGGTCTTAGATTATGACTACTCCAGTGA GAGTGACCAGGACCCTATCCAGGTGGACCAGGCGTGGAGGGGGGATGGAG ACAGTGATGCTGAGAGCATCGACAGTGAACAGGAGGACCCTCTCAAACAT GCTGGAGTGTACACGGCAGAGGAGGTTGCCCTGATCACAAGGGAGAAGTT GATCAGGCTGCAGTCCCTGTACATCGACCAGTTCAAGAGGTTGCAGCACC TTTTGAAGGAAAAGAGACGCAAGTACCTCACCGCCAAGAAAATGGAGCAG GACATCCTTGGCTCTGTCATTCCTTCTACTGACGAAGACTTGGACAGCTC TGACAAGGAGAAACTCCGCACCCTCCGCGCTACCAAGCGATATCGTAAAC GCCACGGAGCCGAGGCGCTTCTCCAGAGCAGGTCCAACGAGAGGAGGATC GCTGCGTCCGAGAGCCATCTGGTCAGCAAACCCACCCCTCCGCCGCGCTG TAACATCATTATAGACGGAGAGAGATGCAGCCACAACGTGGTGCCCATGT CCAGATTCTGTCTCCAGCACGTCCTCCATGACCCACACCAGGTCCTCTTC CAGCACTGCTCCCACTCGACAGGAGGGATCGAGATCTGTGACAAGCCGGT TGCCATGGGGATGGACCGAACCACCTGTGTTCTACACTCACCCCTCCCTC CGCAGAGGTTCAAAATGCCAGAGAAAGAGGAGGAAATGATAGTGGAGGAG GTGAAGCCAGACGTTATGCAGATCGATGTAGAAGAAGATGACAGCAAGCC TGTGGTGGTCACTGCTTCAGAGGGCAAGGGTCAAACACGGGACCTAACAG AAGCTGCCACCATAAGTGGTGCAGAGGGGACCAAGGAAGAATCATTGGGG AACCAGGAAACAGCAACTGTGGGAGATGAAACACCAGCTACCTCCAACCA ACCTACCACTCAGGCATCTCAACAAGATTCCATGGATACAAATGGCGAAA CATAA
Gene-mRNA-Prot
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000442-exon-Sc0000000-1564993656:3335844..3335875 | BlTCONS00000442-exon-Sc0000000-1564993656:3335844..3335875 | Branchiostoma lanceolatum | exon |
BlTCONS00000442-exon-Sc0000000-1564993656:3336212..3336326 | BlTCONS00000442-exon-Sc0000000-1564993656:3336212..3336326 | Branchiostoma lanceolatum | exon |
BlTCONS00000442-exon-Sc0000000-1564993656:3336938..3337101 | BlTCONS00000442-exon-Sc0000000-1564993656:3336938..3337101 | Branchiostoma lanceolatum | exon |
BlTCONS00000442-exon-Sc0000000-1564993656:3337569..3337826 | BlTCONS00000442-exon-Sc0000000-1564993656:3337569..3337826 | Branchiostoma lanceolatum | exon |
BlTCONS00000442-exon-Sc0000000-1564993656:3338392..3338570 | BlTCONS00000442-exon-Sc0000000-1564993656:3338392..3338570 | Branchiostoma lanceolatum | exon |
BlTCONS00000442-exon-Sc0000000-1564993656:3339163..3339390 | BlTCONS00000442-exon-Sc0000000-1564993656:3339163..3339390 | Branchiostoma lanceolatum | exon |
BlTCONS00000442-exon-Sc0000000-1564993656:3341369..3341659 | BlTCONS00000442-exon-Sc0000000-1564993656:3341369..3341659 | Branchiostoma lanceolatum | exon |
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:3335844..3341659 + |
Properties
Property Name | Value |
GeneID | BlCUFF000232 |
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