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Sequence
The following sequences are available for this feature:
mRNA from alignment at Sc0000000:1623442..1632514+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >BlTCONS00000253 ID=BlTCONS00000253|Name=BlTCONS00000253|organism=Branchiostoma lanceolatum|type=mRNA|length=9073bp|location=Sequence derived from alignment at Sc0000000:1623442..1632514+ (Branchiostoma lanceolatum) CGAAGATCTCAGTTCATTTTATCTATTCCATATTTTTAAAGATTCTATGC
GTAAATGTGAATATTATCCAAACAGCTAGAAATCTATCTGCAAAAAATGT
ACATTGCTGACTTATTTAGCACTTTTGTGGGAGAAAATGTGATTTTAGAA
TAAAAATTTTATGTTCGGAAAGTTTCCGAAGATTTCCGGTGATAGCCGAA
GTTGAAGGTGCGCATGCGGGGTAGACTTGATTTTTTTGGCGGGCAACCAG
AGGGGGATCATTGCTACACACTGAAAGGTAAGCACGATGTCACCGCTTGT
TTTGAACAACTTTTCTCGCCAATTTAACTCTTATCAGCCCGTTTCCTTGT
CAGACTAGTTCGCGTAGACCTCTCCGAATCTCCCGGTCATTGATTTATGG
AAAGTTTTGGTCAGATAGTTGCCTTCTAAGGTGGTGTCGGAGAGAAAAAG
ATCTTCGAAAATTTCCATTTTCTTTTTTCAACATGGCCGCCTTGCGGTCA
CGATGAAGACTCCGCACAAAGTAGCTCCTTCAGTACCTAACTCCGTGCCG
TAGTTTGGGGGTGCTATGGAGTGTTAAGACGACTGTGATGCCCTGTTAAT
AGTTTTGGTGTGAGAATTGTGTAGATTTTCCCTCAGGTTAGCTCGTGGTG
TTTGTAGTTATGTATCGGAGCGCGAGCAAGTTTTCCCCTCAAAAGGCCCC
ACGCCGTCAAACTATGCGGCTCTCACCTGGCCTGTGTCTCATCTAGGGCG
ACGAACGGCATATTTTTACTAAACACGTCACATTTCTAACGCCAAACAGA
GACATTTCGAGGTACCAAATTAAGGACGACTTTATTTAAAGCTGGATAGA
TGCAGGCACGATTTGGGAAGTTCTTTGTTACTTCTTTTCAGGACAGAAGT
CATGTGCAGATGCATACCTGTTGTAAACAATGTGGCATTGAATGTGGAAT
AGCAGAAAGACAAAGGGTTCTTTTGTCTTTGGAAATCTACATCTCTTTAT
TACAGGACATCTCTCCAGAAATCACACCTTAGCAACTATTTTTTTTCCCT
TGACTCTGGGTGTAATGACTAGTTTGAGGAAAGTTGTATGTTCATAAGAT
TAGCATACAATATTAGGAATGGTTTTATTGTGAAATAATGGAATGGGGTC
AACACAACCCAAATTCACAAGGATAATTTGGGAGGGGGGGCGCAAATTCC
TATCATACAGGTACAGTATATTCATAAGTGCCCTTGACTCTTGGTATAAT
GACTGGTTTGAGGAAAGTTGTATGTTCATAAGATTAGCATACGATTAGGA
ATGGTTTTATTGTGAATTAATGGGATGGGGGTCAAAACAACACAAATTCA
CAAGGATAATTTGGGAGGGGGCGCAAATTCCTATGATACAGGTACAGTAT
GTACATAAGTGCCCTTGACTCTAGGTGTAATGGATGGTTTGAGGAAAGTT
GTATGTTCATAAGATTAGCATACAATATTAGGAATGGTTTTATTGGAAAA
TAATGGAATGGGGGTCAAAACAACACAAATTCACAAGGAAAATTTGGGAG
GGGGGTGAATTCCTATGATACAGGTACAGTATATACAAAAGTGCCCTTGA
CTCTTGGTATAATGACTGGTTTGAGGAAAGTTCATAAGATAAGCATAGGA
TTAGGAATGGTTTTATTGTAAAATAATGGGATGGGCTCAATAGATCACAA
ATTCAGAAGGATAATTTTGGAGGGGGTGCGAATTCCTATGATACAGGTAC
AGTATGTACATAAGTGCCCTTGAGTCTGGGTGTAATGACTGGTTTGAGGA
AAGTTGTATGTTCATAAGATTAGCATACAATTAGGAATGGTTTTATTGTG
AAATGATGGGATGGGGGTCAAAACAACACAAATTCACAAGGATAATTTTG
GAGGGGGTGCGAATTCCTATGATACAGGTATAGTATGTACACAAGTGCCC
TTGACTCTGGGTGTAATGACTGGTTTGAGGAAAGTTAATGTTCATAAGAT
TAGCACATGATTAGGAATGGTTTAATTGTAAAATAATGGGATGGGGGTCA
AAACAACACAAATTCACAAGGATAATCTTGGAGGGGTGTGTGAATTCCTA
TGATACAGGTACAGTAGGTACATAAGCGCCTTTAACAACCTCAACATTAC
TATTGAATTTTGACTTATTTATGATTGTGCTGATATAATTTATGTAAATT
TTATTTTGTACTCTTAATACGTGACTCCNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTAAATTTTTTTTTGTACTCTTAA
TCCGTGACCCCCCCCCCCCCCCCACCCCCCCTCCACTTCGACCTTGTTGA
AATGTGGCCTTTGTGGCCGAACAAGCTATCAAAAGGAAATAAAGGCTTTG
TTTGATTGAATAGAGGGGTAACCTAAATTTACATTTCAGCACAATGTCAA
AAAGAAATTTCACTTTCTCTACAAAGACCATCTGATCACAAATGTAACAA
AGAGTGCTACCTCAGCAGAAAACTTGGAAAGCCACCCCACCATAATGTAA
TTCAATCCCTCCTATTGAAATATATACTTCTACAAAGTTCTATGAAGGTC
ACTCTTCACAAATTGCTGACAGCCCTTTGTGACATAGGCTTACCTGTCCT
TGACGTTTGTCACCTGTGTTTTCTGCCCTCGGGCTTCGCATTCTCTCAGA
CACAGACAGCTGCTAGTTTAACAACTGAAATTTTACACTAGATATTTGAA
ACTATCCACTAGAAATGCTCCTCCCATATTTTATATATGATGATTTCCAC
ACTACAATGTCCTATAGATTCTGGCGAATTTTGCCCCTAAAGAGATCTGC
TTGTCTGTCTGTCCTTTTCATGTTACTTGCAATTAGCCTCCGGACAAGAA
TTTGCAAAAAAAATAAAAATATCCGTCTTTTTTTCAGCGGTGCTGTTGGA
TTCTACTTCTGATCGTCCTACAAAGGATGGGAAAGAAGAAGATGAAGAAA
TCCGGAGCTGAGATGGAGGAAGAAGAAGAGCCTGAAGAGTATGTTGTGGA
GGAGGTGCGGGACCGACGTGTGCGCGGCGGCAAGGTGGAGTTCCTTCTGA
AGTGGAAGGGATACTCCGAGTAAGTTCTGCAAATATTTTATTCTGACTGT
AGTGTTGCATGGCTGTCTTCAGGAACTGTCCCGTCATCCCAGGACGAAAA
TTCCCTTGTCGAATTCACCCCATAACATTCGTACCAAAGATACTTCATGA
CATGACATTGATAAAAACGTTTTTTCGTAAGCTGAGAGTCACAGATTTAT
CAACAAATAAAAACAACACTGGCTCCCAGACAATGAATGGGATGGAATAA
ATTGAAAGCAGGAGACAGCCCTGGACTTTTTTCTGCCAACACGTATAGTG
CCATAGCATAGCATTTATCATTACAGATTCTGCAACATATTATAACTATG
ATTAGGGTTTTTTCTAGAAAAATTAAACAAGAGGGAGCACACACAGGCGA
GGTAGCGAATTCTATGTATTTATGGAAGAAATATATCGCTGAGGGAAGTC
TGTATGATGGGGATTATGCTAAAATCTGAATTCGACAAGAAGGGGGCTGG
GCTGAAACAAGAGGGCGCAGCGCCCCTCTTTCCCAATGTGAATGAATCCC
TGATGATATTTCTTGCTCGTGTATCTTGGCAAGTTTTTCTTGTTGCCTTT
ATACTGAAATTAACTGGGTTACTTCGTACTTCAGTGCCCAAAATTTGCTT
TCTGCATTATTCGATCCATGATACAAAGTCTCTTAGCATGTAAAGTGTAT
TTGTTAAGCTGTTGACATATTTCTGAAGATTTCCGGAGAGTATTTCAAGC
CCCTTTTTGCCAATGTGTTTTCCATGCCCTTGGATTTAGTATTTGTTAAA
AGCACTCCAAGTACAAATAGTTGCATAAAAGCCTGAAAGGGGGTCTTCTT
ACAGGTTTATATATATATGGCCTCTGTCGGTCTGTATTTGCCATGGTAAA
ATCCTAATTCACAACAGCCCTACAGCATCGACTGGCTAAACAGCCCTTTA
TGAGAATGGCAGTCTCTGCCACAAAAATTACATCTGTGAGCTGACTCAGT
TCTGTTACAAAGCTCTTTTCTGCGGATCTGCTTTTCTTCTGCGCTGTGCA
TCAGTCTGGCTTCTCCTGATTTGAGCTTACAGGTGGTGCTTCACTAACAG
TAACAACTGGGTAATTAATTTGCTTGCAGGATCGAAAATACTTGGGAGCC
AGAGGAAAACCTGGACTGCCCCGATCTGATTGCGGAGTTCATGAGGAAGT
GGAACCAGAACAAAGCAGCCAAAACAGACGAAAAGAAGAGAAAATCCACA
TCCACCGTGAACGGCACAGAAGAGTCCAAAAGGAAACGGAAGGCAGAAGA
GGTGGGTACGGTTTGTGCGACAGGCAGACATTTTAATGGAGTGGCATCAT
GAATAAATTATAGGGGCATGTTTTTATTAGTCTTCGTGATGAATTTTTCA
GATGAAGAGTGAATGTTTGACGAAAAGTGTTGCCCTTGGCTGGCCGTGTT
GGTTTCCACGGATCTTTCTTAAACCTCCCGTGCCAGTTTGTATTTTTTTA
GTTTTTTTTCTGCAGAACTCATATTGTGATTTTGCACTGGTGTGAAGAAC
TGTTAGTGAGTTCTGAAATTTCTTGTGGAAAATCATCTCTGAAATCTACA
TGTCTCAGGTGGAAACATCTTTGACATAGTCTTAGTATTGCATGTAAACC
CCAAATGTTGTGACTCTAGAAACGTAGCAGCCCCAGGAAGGCCGGGACAC
ACATGGTGATGTACGAGGTTGGTGATTGGGTGCAATGGAATCTCTCCTCT
TCGATTCAAACCAAACCTTCCTCTGGATTGAGCCTTTTGCTATTTGTTTG
TTTCTTTACAACTGTGTGGACTGAAATGTGGAAACATTCTTCATAACATA
CTTTTTTTCAGCTTTGTCTTTGAAACTGACTTTCATTGATTTGCATACAC
CGCCTTTGACTTGCTTTAGGTAAAGAATTTAGATAAAAAATGGATGCAAT
GGAAAGAAGCAGTCATGAGTTCAAAAGTAAGCTGTAAATTAGATAAAGGT
ACAGTTTTCTTTTTAAAATACTGGCACCGCAAACATTTCTGCTTTTACAG
TACTTGAAATTGACCTTTTTTGTGCCCAACTTAGGATGATGAGGACAAAC
CCCGCGGCTTCGACAGAGGTCTTGAGCCGGAGAGAATTATCGGAGCTACA
GATTCCAGTGGAGAGCTCATGTTCCTTATGAAGTGGTGAGTGAATTATCA
TCTATCACTAAGGCCACACCAATTTACTTTCTTGGTTAATGGAATTTGAA
AAGAATGCTACATTGGAAAATCAACATGAAAACAGAATCTCAGAGGAAAG
TCTGTACTTTGGTGCACACAGTTTCATGGAGTGAACAGGGTCGGGTGCAA
GTTTTCACCCCAGCCTTCTATTTTAATGATGTCCTCATGCTAAAATTAAA
AAAAGAAATCTGTTAACCAAGAAATTAAATTGGTGTGGCCTAAGTATCAG
GCTTTACTTTTTGGTTAAATAAGGCCATGATGATTCAATTGTATGGATGA
CATCCATGCAGGCATCAATTTTTCCCCAAGAAAAAAGCTGTCAATCATAG
CACAAAGCAGCTTCAAGATATGGCCAAAAAATATTTTGGAGAACAATACT
AATGTCGTAGAATGCCAAAGAAGAAGATGTGAAACTGAAAGAACAAAAAC
CTATTATTCGGTATACCATTCTTTGTTTGCTTGAGCATTTGTTCATCCTT
CCTGGCCCATGTAGATTTCATAATAAAGGAAAGTTTTTTTTGCCGAGCTT
TTTTTATTTGCACGCTTGCATTAATTTCGGGGTTCCCAGAGGATGTCATC
CGTACAATATCTCACACGTGCAGTAGAGCATAATGTTGGTAGAATATCTC
GCCATGACTCACGAATGATTGTGTTGTATCTAAAGTCATGCAAGAATTGA
ATTTTTTCATGTTGAGTTAACGTATTGTAACGTTCGCCCTCTTAGATGCT
ACTATCTCACATGACAGTTGAGCATGATTTCGGTAGAATGTCTCCAAAAT
GACCAAAACGAAAGAACACGAACCATGTGCCAGCTCTCAGTCTTATGTAT
GTTGTACCATGTATGTGGAATAACATGTGTATAGATTTATGAGGACATTA
AATGATGTAAACTGTACTTTTGTTATAACTTTTGCTTGACCCTTACCTCA
TGGCATCAATGAAAAGCAGCCTGATTTGAGCTTCTCATGAATAAACAAAG
GTTCAAACAAAAATGTCTGTGTACGCCAAAAATAGTTACTCAAGCAACTG
GATAAAATTTTGAAACAGTCAGATGTTTCAGACAGCATCCGCTATCTTTC
GTCAGTGACTTTTTATCCAGTTTCTTGAGTAACTATTTGGGGCGTATCTA
ATTTCCTGGATGTCTAATCTTCATCAACGTAAAATGTCTGTGTGTCTGCA
GGAAGGGGAGCGAGGAGGCTGACCTGGTTCCCGCGCGGATAGCCAACGTA
AAATGCCCACAGATCGTCATCCAGTTCTATGAGGAGAGGCTAACCTGGCA
TTCGTACCCCAGCGAAGAGAACCAGAACGACTCTGGCAGCACTTCAGAAA
CCGTGAACGAAGTCTGATGACTGCCCATTTTCCAGAGTTATTTTTTTTTC
TTTCATATCAAAAGTACTTTCCTGATGAGCTAGGAAAAGGGAGCAACCAT
ATTCTCCTGTAGTGACACTCTTAAAAAGGTTGATCACTGAAACTTTCACC
GATATGTGTACGGGGGTCTTTTCCAAAGCACACTTGTTATCAGTCAAACT
TCTTAACTATGTATGTCTCTAATAGTTAGGTCTATTCAGCAAAAGGATCG
TATTTGTATGAGTAAAACCATTCCCCACCTACGAGTATATTTGTTACTTG
GAGGTTTTGGCCTTAAGGATGTAAAAAAAAATGAGGTTGGCGAGAGAGTG
GTATTATGAGGCCTAGAAACAGATAAGAAAGACTTGTGGACTTCTTGGGC
TGCAAAAGTTGTGTTGTAGGTATTAAGGTTGCTTGGAAAATGTCTTGTAT
TGCACATGTATTGCCACATTGAAAGTGGGGCTTGACTAGGACTTAAACAC
AACCATGCAAATATTGAAAGGAACCCTACAGAGTGGACTACAATAAGGTT
GTTCCAAGGGAATTATCTAAAATGGTGAAAATCTGGGGTTGCTTGTTTTG
GGAAATGGTTTACAACATTCACAGACAATGATTTATTTTTTGGATAAAAG
TGTATCTCATACTAGTAATGCTAAACCTATATCTTATCAATGTGGCCTAC
AGGGCAGCAAGGAAAGGAGTATGTCCTTGTTTTTGTAAATAGGCTCCAGC
CAAGCCAAACTGAAAATGCCATGCTGAAGAGAGGCTAATCTTTGGAGGAA
TTTTAGTTATAGCTTTTTTTATATGATGTAGGAGGATGAGCTGTTTAGCA
TTTTATGTAGATGTCTTGTAGTGAGCACCCTGCGTAGATAGTGGCTATCG
CTTGCGTTTGGCAGTCTGTGCCCTAAGTCAGGAATAGACTTGTATTGACC
CTTTCATTAATTTGTAGTACTAAGAACCTGATATTTCTGGAACATCTAAC
ATTTCACATTAACCTCATCCTCGTTAAACCAGGACCCATATCGCTCCACG
TTACATCGGTCGCGGAATGGGCCCTGGTAAAAAGCTTCGCCACATATGGT
TATGGCAGGTCGATGAGACTTGCTCATAAATTATTAATGAGCTGACCTTA
TTTGACACAAACGGCAGTTGTAGCTCATGAATAATTAATGAGCTAGCCGT
AACACGTAACCTGATTGGTCGATAGCTTCCCAGCGTTCTTTGCGCGTTGG
CTTCCCACCTGATTGGTCGATAGCTTCCCAGCGTTCTTTGCGGGTTGGCT
TCCCATGAGAGGAAGCAAACCCTCTGATTGGCTGAAGCTGTTTTGGTGCC
GACGTCGTCATAACCATATGTGGCGAAGCTTTTTACCAGGGCCCATCCCG
CGACCGATGTAACGTGGAGCGATATGGGTCCTGGTTTAACGAGGATGATT
AACCTGAGAGATTACGTGTAACAGAGGTATTTCAAATTCCCATTTTATTG
CAGTTCAGCTGAGGATACAGGGCGATTTTTTTCCTCTCAGTACAGGCACC
CTCGGGTATGAAATCACTGTAACAAACTGTTAGTATGTATGTGTACTATA
TTATGTGCGGAGTCCTTGGTCACATTACACATAGGCTTTGCTCAGTGTTG
CTTAATTTCCACTTTCTTATAAATAATAATAACAGCAAAGTACATGTACA
ACATTTCTACTTACCTAACAACTTTCAAAAACATTCAATCAGTGGTCCAA
CTTACAAATTTCATGAACATTTTTCTAATGTATGTGTTCCTATTAATGTC
CCATTATTACCTGGTAACAGTGAAACTGTATGACTAGCAGAACAGTTTAT
GGTGTATTCTGGAATACTTGCAGGCTAGGAGAGTCAGTTTTTGTCAGCTT
GTACATTTTGAACACTGGGTACTGACGTGTTGTACTGTTGCTTTGGCTCT
TTAATGACATACCTTTCTCTGGAGTATTAGTTGTGTATTTATGTTCAATA
AAAGTTCTTGTGTACAGAGTTCAATGTCTGTTACTTCCACATGACTCGAG
TCAATATGTTCACTTTTCTCAAAGATCTTATATAGTGCTCTCAAAAGAAT
GCTGAAATAATGTGACAATACATATGTGTCTCTTTGTACAGAAGACAAGA
AAATAACCTAGTCGCAACACATG Coding sequence (CDS) from alignment at Sc0000000:1623442..1632514+ >BlTCONS00000253 ID=BlTCONS00000253|Name=BlTCONS00000253|organism=Branchiostoma lanceolatum|type=CDS|length=582bp|location=Sequence derived from alignment at Sc0000000:1623442..1632514+ (Branchiostoma lanceolatum) ATGGGAAAGAAGAAGATGAAGAAATCCGGAGCTGAGATGGAGGAAGAAGA AGAGCCTGAAGAGTATGTTGTGGAGGAGGTGCGGGACCGACGTGTGCGCG GCGGCAAGGTGGAGTTCCTTCTGAAGTGGAAGGGATACTCCGAGATCGAA AATACTTGGGAGCCAGAGGAAAACCTGGACTGCCCCGATCTGATTGCGGA GTTCATGAGGAAGTGGAACCAGAACAAAGCAGCCAAAACAGACGAAAAGA AGAGAAAATCCACATCCACCGTGAACGGCACAGAAGAGTCCAAAAGGAAA CGGAAGGCAGAAGAGGATGATGAGGACAAACCCCGCGGCTTCGACAGAGG TCTTGAGCCGGAGAGAATTATCGGAGCTACAGATTCCAGTGGAGAGCTCA TGTTCCTTATGAAGTGGAAGGGGAGCGAGGAGGCTGACCTGGTTCCCGCG CGGATAGCCAACGTAAAATGCCCACAGATCGTCATCCAGTTCTATGAGGA GAGGCTAACCTGGCATTCGTACCCCAGCGAAGAGAACCAGAACGACTCTG GCAGCACTTCAGAAACCGTGAACGAAGTCTGA
Gene-mRNA-Prot
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
BlTCONS00000253-exon-Sc0000000-1564993656:1623442..1623497 | BlTCONS00000253-exon-Sc0000000-1564993656:1623442..1623497 | Branchiostoma lanceolatum | exon |
BlTCONS00000253-exon-Sc0000000-1564993656:1623614..1623718 | BlTCONS00000253-exon-Sc0000000-1564993656:1623614..1623718 | Branchiostoma lanceolatum | exon |
BlTCONS00000253-exon-Sc0000000-1564993656:1626629..1626810 | BlTCONS00000253-exon-Sc0000000-1564993656:1626629..1626810 | Branchiostoma lanceolatum | exon |
BlTCONS00000253-exon-Sc0000000-1564993656:1627921..1628092 | BlTCONS00000253-exon-Sc0000000-1564993656:1627921..1628092 | Branchiostoma lanceolatum | exon |
BlTCONS00000253-exon-Sc0000000-1564993656:1628876..1628976 | BlTCONS00000253-exon-Sc0000000-1564993656:1628876..1628976 | Branchiostoma lanceolatum | exon |
BlTCONS00000253-exon-Sc0000000-1564993656:1630193..1632514 | BlTCONS00000253-exon-Sc0000000-1564993656:1630193..1632514 | Branchiostoma lanceolatum | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:1623442..1632514 + |
Properties
Property Name | Value |
GeneID | BlCUFF000133 |
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