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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97201_cuf0 >transcript:BL97201_cuf0-protein ID=transcript:BL97201_cuf0-protein|Name=transcript:BL97201_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=116bp
MPPKSDKISDDPRVYIYGDTKLMMELRSAPYDPKKNVWAPDDKDVYIAVE IKEEKGDKITVQLPKGQTKEVKKDKIVMMNPPKFVCCEDMANMTYLNDAS VLATLRDRYANGMIYV Run BLAST on NCBI mRNA from alignment at Sc0000733:6208..7987+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97201_cuf0 ID=transcript:BL97201_cuf0|Name=transcript:BL97201_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1780bp|location=Sequence derived from alignment at Sc0000733:6208..7987+ (Branchiostoma lanceolatum) GCCGTTATAAAGGCTCCCGCCCCTCAGTTTGTACTCCGACAGCTTCTAAC
CGAAAGGTAGAGAGCACCTTATCTGTACTTTCACAGTACGGTGGACGGTT
AGAGTAGAGTAACGTTTTTCTGGAATGATGATTAATTTCATGCATGTTGC
TTGATTTTCCATTGAGAATGGGATGTGTAAAGCTAGATGGTGCAGTTGGT
AGCGTGTTCTGTGTGGGAAAATGACTCGACCAGAGCCGGGAGACCCAGGA
CAGGGCTTGGGCAATAACGTTACTAGAAACGATTAGTTTGTTTGAAAGTT
TGACATGTTTGGATTCCAGGAAACCATCTTCCTGGAATGGAAACATGTAT
TGATGTTTGTTTCTTCTATCTTTTCAGGGCCGTAGCTGTAGCTCGTCGGA
CTCATCTTCTGTCTCTCCCGTTCAGCCCAGTCGGCGTGCCACTCCTTCCT
TCTGTGTCCGTAGCCAAGAGGAACCAGAGCCAAGATGCCGCCCAAATCCG
ACAAGATTTCCGACGACCCTCGGGTCTACATCTACGGTGACACCAAGTTG
ATGATGGAGCTCCGCTCCGCACCGTACGATCCCAAGAAGAACGTCTGGGC
TCCGGACGACAAAGACGTGTACATCGCTGTGGAGATCAAGGAAGAGAAGG
GCGATAAGATCACGGTTCAGTTGCCAAAGGGACAAGTAAGTACATAATCG
CTACAAGACCTTTGCGACATCCAGGTCAATGATGCACATCTCTAAGCTGA
CGGAATCTAGATTGGTGTATTTGGCCTCTCTCATTGGTCTCTCAGAGAAA
ATGACAAAGGTGCACAGCTACTAGAGAAAAACGGCAGACATGGAAGGCTT
AAGACTAATAACCAATCTGATCAGCACACAAGCTACCAGGTATTGAAATA
CGCGAACTAGACCAATGTTAACTACATGAGCATCTGCCGGGCCAAAGTCA
ATGAAAAGGGACAAGATCACATACCAGACATTACTCCTGACCATATCATT
TTCATTATTTCTGCTGNGATATCCAAACAATATCACATGAAACCTCATTC
CATTTTCTAGTAACAGACTATGATGGTAAACGAGATAAAATTTACAAAGT
TTAAAAAAAATGTTCAACCCTTGTTCATCCAACATTACAAGTCAATGAAA
GCGAATCAATACCATTTTCTTCCAGGAACAATATTTCTAGGAAAATGTTA
AAGATTATTTTCAATTGATTTTGGCTTTACTGGAGGTGATACAAGGCACT
GGAATCAACTTGGAATCAACTTGCAATCCTTGAACAGGACCTATTTTCGT
TTTCAAACTTTTGTTCAAATCACCAATGTATACACAGTATTTCTTAGATA
TCCTAACATCGCTAGCCTANATGAATCGTTGTTGAAACATTGTTCAAACG
AAGTTTGATATTTATTGCCACTGCACCATTAACATGTCTTAATATGATGT
ATGAAAAAGAACAAAAGGATCCTCAGAACGACGGAAAAAGAAGAAGTTTG
TATTTGCAAATTAGCTCTATTTATTTTCCTTAACTTATTTGCCTTTTTTG
GTTTTAATCGACACAACGATAAAGTTTTGCAGAAGACTGTACTAATCATA
CTAACTACGTTGGGCTCTTCATATGTTCTGTAGACCAAGGAGGTGAAGAA
GGACAAGATAGTCATGATGAACCCGCCCAAGTTCGTCTGCTGCGAGGACA
TGGCCAACATGACCTACCTGAACGACGCCTCTGTGCTGGCGACCCTCAGG
GACCGTTACGCCAACGGCATGATCTACGTA Coding sequence (CDS) from alignment at Sc0000733:6208..7987+ >transcript:BL97201_cuf0 ID=transcript:BL97201_cuf0|Name=transcript:BL97201_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=696bp|location=Sequence derived from alignment at Sc0000733:6208..7987+ (Branchiostoma lanceolatum) ATGCCGCCCAAATCCGACAAGATTTCCGACGACCCTCGGGTCTACATCTA CGGTGACACCAAGTTGATGATGGAGCTCCGCTCCGCACCGTACGATCCCA AGAAGAACGTCTGGGCTCCGGACGACAAAGACGTGTACATCGCTGTGGAG ATCAAGGAAGAGAAGGGCGATAAGATCACGGTTCAGTTGCCAAAGGGACA AACCAAGGAGGTGAAGAAGGACAAGATAGTCATGATGAACCCGCCCAAGT TCGTCTGCTGCGAGGACATGGCCAACATGACCTACCTGAACGACGCCTCT GTGCTGGCGACCCTCAGGGACCGTTACGCCAACGGCATGATCTACGTAAT GCCGCCCAAATCCGACAAGATTTCCGACGACCCTCGGGTCTACATCTACG GTGACACCAAGTTGATGATGGAGCTCCGCTCCGCACCGTACGATCCCAAG AAGAACGTCTGGGCTCCGGACGACAAAGACGTGTACATCGCTGTGGAGAT CAAGGAAGAGAAGGGCGATAAGATCACGGTTCAGTTGCCAAAGGGACAAA CCAAGGAGGTGAAGAAGGACAAGATAGTCATGATGAACCCGCCCAAGTTC GTCTGCTGCGAGGACATGGCCAACATGACCTACCTGAACGACGCCTCTGT GCTGGCGACCCTCAGGGACCGTTACGCCAACGGCATGATCTACGTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000733 | genome | Sc0000733:6208..7987 + |
Properties
Property Name | Value |
Transcript id | BL97201_cuf0 |
Biotype | protein_coding |
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