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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97306_cuf7 >transcript:BL97306_cuf7-protein ID=transcript:BL97306_cuf7-protein|Name=transcript:BL97306_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=134bp
MSRSTQSWFPVLDCLLAMFVSIAAQSSGCSFHEDIHGRVQPVSPVVLVGS TVILNCTIHPDVDGITARGVFWRHDTETIPAEGYRVLSDTVSQLVIENVS PDSAGRYECFVPEPTNRDCGSLVGGGELEVGCKY Run BLAST on NCBI mRNA from alignment at Sc0000379:198014..200535- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97306_cuf7 ID=transcript:BL97306_cuf7|Name=transcript:BL97306_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2522bp|location=Sequence derived from alignment at Sc0000379:198014..200535- (Branchiostoma lanceolatum) CACTTCCCAGAAGCCGGCCCCCTGTGCCTCACTTCCGCCGAGCTTCCAGT
TTCGCACAGCGTCAAACCTGATTAAACCTCCTTGGTCAAACGCAGCAAAC
ATCACATAGCTCCACACGACTCTTGGCTGATCTCTTGTTCGATGTTTGTG
TTCTACGAAGACTGGGGATCTTCAATATAATCGTGTACAAGGTAAGGCGT
TTGTTTGTTTCCAAGGACCATTCAGGATCGTGGCGACCATTAATGCGGAA
GTGGAAAAGTTGTGGGACTGTGGGCACAGTGCTGACACTGTAGTCTCTAC
CAGACTTCACATGGCGCTAGGAGTTAGCTAAATATAAACAGATAACATGC
CTGAGGAGTTAGGTCACAAACTGTACTCCTATATGGCATTTATCTGTCTA
TTTCACCAACGTATACTATTTTTCAGCGATCTATGGAGCTAGTCCCTGCA
GGTATTGAGCTACTCAGACTACTGTGTCACTGTAACATCGCGAGTCCGGG
ACATAATAGTAGTAACTATAAGTATCGGCAATGTAGATTGGTCTGTAGTT
TCGCAAGTTGTTGGACTTTACATAAACGTTTTTTTAGAAGGTTCAAAATT
TTGAGAGATGGACTCGGGAGAGTCAATAAATTATCAGAATATTTTTCTTC
ATTCTTTCAGTCCAGTTTATTTACTCGCAATCCCTGTTCAGATTTATGAT
GTCTTGTTTTTCTTTGTACAATATGTCGTTTTACAGCCGATTATCATAGC
AGCCTGTGTACAGAAATGCCCCCATAGCTCAAAACCTGACGTCCTTTATC
ACAGTTAAATGTGCACATGTTGTCAGGCCCTCCCTTCAAGTTGTAAATGT
AATTTGATCCCGACCACGAGAGCTGCTCTGTCCATGAAAGTTGCTCGATG
TTTACGTTATTGGTAAATAGGTAATGCGATGTATCGTTCTTTAGAAATGT
TCAATACTATCAAATTAAGGCTGGTTTAACCAGAATTGTTTTACATAACC
CTAGCAATCGTTGAATGAAATGAACCTTCACAGTGATGACAATGTAGTAA
GTAAGGCTGTGTTTTAATCCATAGTTACCAATAATGTTACCATGAATGAA
AGGTAATACTGGCCCATTAATTCTACCGAGATTGCACTGTGTTATAGTCA
AACCATTGTACAGGTATTAAAGAAAGATTTACAGAGAACCCTAAACATAC
AGGCGGAAGCCCCTAGGGAATATTACTACAGGGCTGAAATAACCGGGGTC
ATTGACCCCGAGTTGTGTCGGTCGCGTCACTGAGACTAGCACATTTCCTG
TGTGGATTTGCAATATTTCCTTTGGTGCTAATTAGGCGGGGAGGGGGGCA
CAGGATTCTACAGTTCACGAAGGAAACTGCTCCACATCAACTGTTTCCAG
ATATATAAACACAGAAAACACAAAAATTCTGTTCTGTTTTTGTCATCTCT
GTCTTCTGATACTCGGAATACTCCTGACACACATTTCAATATATTAAGTC
GATGTCTCTTTAATCTATTTTTACTTCCAAGGTCCAGCACAGTGCCAAGA
AGTGGGGCTGTTCACTCCAAGAGTTTCAGCTGGCTGACAAGAATGTCAAG
AAGCACACAATCATGGTTCCCTGTACTCGACTGCCTCCTAGCGATGTTCG
TCAGCATTGCAGCACAGTCCAGTGGTTGCTCCTTTCATGGTCAGTGTTGG
TTATTTACTGTTAATACTTCTGTTTGGTGTTTCATTTGTACCTCACCACC
GCCGGATATTCTTAAAGGTGATATTTCCACCTACTTAAAACTCCAAACAT
GAATGATCTGAAATGAAGAAGCTTGCCTATGCCTTACAGAATAGGAGCAT
GGAGACAATGCTATAATAGTGGTGTATAAGATGTCCTGTACTTAACCCAC
AGAAGACATACACGGTAGAGTGCAGCCTGTGAGTCCGGTAGTACTTGTCG
GGTCCACGGTCATCCTCAACTGCACGATACATCCCGATGTCGACGGCATC
ACGGCACGCGGGGTGTTCTGGAGACACGACACTGAGACGATACCAGCCGA
AGGCTACCGTGTTCTGAGCGACACAGTCAGTCAGCTGGTTATTGAGAATG
TCTCGCCGGACTCAGCAGGGCGCTACGAGTGTTTTGTCCCCGAGCCGACC
AATCGAGACTGTGGGTCATTAGTTGGCGGGGGGGAACTGGAGGTCGGATG
TAAGTATTGATATACAGAGTTAATGTCAACTCCCAGGGTCTGATATCAAG
AACATTAACATTAGCCTGACTAAATCATGCTTCTAACATCCCTTCCACTC
GTCAGGCCACTAGAAACTTGATAGACTCCAAGTCAGGAGACTCCCAGGAA
CATCTCACTCCTGTTGAATTGTTAATATGCACATGTGCTAAGATGGACCA
GGCATGGGAAAAGGAGGCCTGGAAGACCCGCAGCAACATACATTGACACC
CTGAAGAAAGACACTGGCCTTGAAGTTGATAGTCTGCTCCAAGCGATGAG
GGATAGAACCACATGGACTGCC Coding sequence (CDS) from alignment at Sc0000379:198014..200535- >transcript:BL97306_cuf7 ID=transcript:BL97306_cuf7|Name=transcript:BL97306_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=810bp|location=Sequence derived from alignment at Sc0000379:198014..200535- (Branchiostoma lanceolatum) ATGTCAAGAAGCACACAATCATGGTTCCCTGTACTCGACTGCCTCCTAGC GATGTTCGTCAGCATTGCAGCACAGTCCAGTGGTTGCTCCTTTCATGAAG ACATACACGGTAGAGTGCAGCCTGTGAGTCCGGTAGTACTTGTCGGGTCC ACGGTCATCCTCAACTGCACGATACATCCCGATGTCGACGGCATCACGGC ACGCGGGGTGTTCTGGAGACACGACACTGAGACGATACCAGCCGAAGGCT ACCGTGTTCTGAGCGACACAGTCAGTCAGCTGGTTATTGAGAATGTCTCG CCGGACTCAGCAGGGCGCTACGAGTGTTTTGTCCCCGAGCCGACCAATCG AGACTGTGGGTCATTAGTTGGCGGGGGGGAACTGGAGGTCGGATGTAAGT ATTGAATGTCAAGAAGCACACAATCATGGTTCCCTGTACTCGACTGCCTC CTAGCGATGTTCGTCAGCATTGCAGCACAGTCCAGTGGTTGCTCCTTTCA TGAAGACATACACGGTAGAGTGCAGCCTGTGAGTCCGGTAGTACTTGTCG GGTCCACGGTCATCCTCAACTGCACGATACATCCCGATGTCGACGGCATC ACGGCACGCGGGGTGTTCTGGAGACACGACACTGAGACGATACCAGCCGA AGGCTACCGTGTTCTGAGCGACACAGTCAGTCAGCTGGTTATTGAGAATG TCTCGCCGGACTCAGCAGGGCGCTACGAGTGTTTTGTCCCCGAGCCGACC AATCGAGACTGTGGGTCATTAGTTGGCGGGGGGGAACTGGAGGTCGGATG TAAGTATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000379 | genome | Sc0000379:198014..200535 - |
Properties
Property Name | Value |
Transcript id | BL97306_cuf7 |
Biotype | protein_coding |
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