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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97124_cuf0 >transcript:BL97124_cuf0-protein ID=transcript:BL97124_cuf0-protein|Name=transcript:BL97124_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=280bp
FTATLIIVCMGLMGLFLFFTLAVIFIHDKEGRLSPVARVLFLRYMARMLL LGDLTKKIEASMDTAAGEDPLTIHPAVELSNIAIDHDDDDVTADDGESVA ENEMGTAVDEDSLTVHPAVEPTNIAIDDDDVTADDGESIASAEILLWSGV DPAMTSKSPTGLESAGSPGFLHLISSVDELTQAVKKGNEEMTKAVKKGNE EMTKAVTNGMERITERLTEELTEGMAKLKNEIEELTKAVKNEEVVPDYTL LTKVLDRLCLVLYVIGIAAAIPMTMFLSKY Run BLAST on NCBI mRNA from alignment at Sc0000297:276573..279839- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97124_cuf0 ID=transcript:BL97124_cuf0|Name=transcript:BL97124_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=3267bp|location=Sequence derived from alignment at Sc0000297:276573..279839- (Branchiostoma lanceolatum) TTTCACAGCCACGCTGATCATCGTGTGCATGGGCCTGATGGGACTCTTCC
TCTTCTTCACCTTGGCCGTCATCTTTATTCACGACAAAGAGGGACGGCTG
TCTCCAGTGGCGAGGGTTCTCTTTCTCCGCTACATGGCAAGGTACTGAAT
ATTTGTCTCCATATCATTTCTGTCCATGATCATATCGGTTTTACGACTTC
TTAACTTTCTACGACGTCAAGAAAGAACGATTATAGTACAAACAAAAAGT
ATTTCTTTCTAAGACGTCAAGAAAGAACTTAATGTTTTACCACGGGGAAC
GTACCGCCCTATTCTATTCATCACATCCACCAAAGAGTACTTCAATCATC
GCTGTTTCATTGATCCTCCATTCTTTAACTTAGCCTACAATTTTGAATGG
CTGTTTAATGAGTCAATGCCTTGGTCTCTGAGAAAAGACGGAGAAGATTT
TGGCAATATCTTGATAATCATGTCTTATACATATATATATGACAATGCTA
GCTATAGTCCTCCACACTTTCTTGTAAACTGCAGATTTCTTACCAACTGC
AGATTACAGGTTTACAAGTGCCATGTTGCTTTGTAGACACAGCTTCACAC
ATATGCAACAAATTCATTTTGTTTATTGTACCATCTATAAAGGATGCTCC
TTCTGGGAGATCTCACAAAGAAGATAGAAGCCAGCATGGATACCGCGGCC
GGTGAGGATCCCCTGACCATCCACCCTGCCGTAGAGCTGTCAAACATTGC
CATTGATCATGACGACGATGACGTAACAGCGGACGATGGAGAAAGTGTCG
CTGAAAATGAAATGGGCACCGCGGTCGATGAGGATTCCCTGACCGTCCAC
CCTGCCGTAGAGCCGACAAACATCGCCATTGACGACGATGACGTGACGGC
AGACGATGGAGAAAGTATCGCTAGCGCTGAAATATTGCTGTGGAGTGGCG
TTGACCCTGCGATGACATCAAAGTCTCCTACAGGTCTCGAGTCCGCTGGA
TCTCCGGGCTTTCTTCACCTGATCTCCAGCGTGGATGAGCTGACTCAGGC
GGTAAAGAAAGGGAACAAGGAGATAACCAATGCGGTAATGAAAGGAAACG
AGGAAATGACCAAGGCTGTAAAGAAAGGGAACGAAGAGCTGACCAAGGCG
GTAAAGAAAGGGAACGAGGAGATGACCAAGGCGGTAAAGAAAGGGAACGA
GGAGATGACCAAGGCGGTAACCAACGGGATGGAGAGGATCACCGAGAGGC
TGACTGAGGAGCTGACAGAGGGGATGGCCAAGCTAAAGAACGAGATAGAG
GAGCTGACCAAGGCGGTAAAGAACGAGGAGGTGGTTCCCGACTACACCCT
GTTGACTAAGGTCTTGGACAGGCTGTGCCTTGTCTTGTACGTCATCGGCA
TCGCCGCAGCCATTCCGATGACCATGTTTTTGAGCAAGTATTAAAAGAGC
GGTATCTAGCTCATAAGGCAATAAGATATGGAGGCTGTGATACCCATACC
TTAATCCTTTTGTCAAACTATCTGTGCACAATTGTCAGCAAAATAGTAGC
CCTGTGCTTGTAAAACAACTGTTATTTTAGCATGATTTTTCTAATGAAAT
TGTAATTTTTCAACAGTCGTCTTGTAAGATATGCTAGCCTGACATTGTTG
TGTGATAAGATATGTGTAAAACCTTTCTTTACCATACTTCTATCATGAGC
TTAACAACGTGGTTTTACGATTCTTTTCCATTCTGTATTAATATTTGGCA
TTTGTCATTGACAGATATTGTGTTTGGGTTTTCGATAAAAAGCATTTGTG
TTACTTGAAGAGTGTGTATGATGATGTGAAAAATGCAGCAAACACTGCGC
CGCCAATTTGAAATTATCAATGACCAAGAAGATTATTGATGAGTGTTTTG
TAGTATTTTACCTAATGTTTTATGTGTTTGAAACGTGGTATTATGATAGC
CAATTGCCCATCTGAGAAATAATAAATGTCATGATGGTCAACTCTGCTAC
TGCAATGTAAAATACTTATATTTGTAAATAATTTTTAACATCTGATCTAA
CTTCTGTTTGAATCACACATAACTTATAACCTGCCTGTTTACTTGTGATT
TTAGAATATGTGTGTTGTTAAATAGGAACGATAATATTATTGTAAATTGC
CTAGGTCAACAGTTTTTAAGTAACATACTGTATGTAAAAAAGTGCAATTC
AGGCTATGGCTGCGATGTACTTTTCATATTGGATCAAAATTATCAAATAC
TCATTCATTCATTCACACATAAGCACAAGTAACCATGTACTTGAAGTAAA
CAGCTTATTTAATGTTTGCCATATACATTGTAGGGTGGGATGTCCACAAC
TCAACTTAGATGTAACCTACTCTGGAAAACGTCCATCCCCGAAAATGTAA
GTCTAACCTTACAGTCTGAAAAACCGTACACGAAAAAGCAACTAATGTAG
TTGCTAGAAGAACATCAAGAAGAGTTCACTAAATGAAACTATTGTGCCTT
TCTTATAAACATTATCTATTAAATGAGTATACATCTTGAGTACACAAAAG
ATATTGTCATAGACTTAGACCAAATCATTTGAACATAACATACTATGCAC
ATCTGGACAATACAATGCATTACACCAGGACAATGTGTATTTTGGTGGGT
CATCTTCATCCTGCTAGAGTTTACTGCAATGTAGCTTGATATCCTACATT
TAATCTGTACAACACTCTATGTTTGATATGCTGCTAGGTAACAGTTTTTG
CATGCAACTAGTGGAGGGACTTTGCTAGTCGAGCATACATTATAATGTTT
CACCGTCATGTAATATTACACTTCAACACAACTCTGTAAAACCTGCCGAC
TTCATTTACAGCAACATCATATTGTTTAAGATAACAAGATTTTTGTATGA
ATATCTGCGCTGCAAGATAATTAATATCTTTCAGCTTTTAGTATTGTTAG
TGTGTGAAGTTTTGATTTGGTTGACAATAAATGATATGAACCTCGTACCC
TATGGTCTATGGTGTCTTAAGAGTCATTGCACGAGAAAACCAGGCAAAAC
CAGGCAGAGGTGGGAATATGGGGGTCGGCCAAATCGACTCATACTCTGTA
TGTGTGATAGGTATGTGGAACTATGAACAGCCATATAATTAAAACCCTCC
AGCTATTTTTCGTTATGGCGTTCTGGGACCCCCCTCCGAGTCCCTCCAAA
ATCCAACAATTTATGGTTAAAAATTACTGAAATTGCGATGGCCACTCTGA
TAATTAAAAGGAAGATA Coding sequence (CDS) from alignment at Sc0000297:276573..279839- >transcript:BL97124_cuf0 ID=transcript:BL97124_cuf0|Name=transcript:BL97124_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2529bp|location=Sequence derived from alignment at Sc0000297:276573..279839- (Branchiostoma lanceolatum) TTCACAGCCACGCTGATCATCGTGTGCATGGGCCTGATGGGACTCTTCCT CTTCTTCACCTTGGCCGTCATCTTTATTCACGACAAAGAGGGACGGCTGT CTCCAGTGGCGAGGGTTCTCTTTCTCCGCTACATGGCAAGGATGCTCCTT CTGGGAGATCTCACAAAGAAGATAGAAGCCAGCATGGATACCGCGGCCGG TGAGGATCCCCTGACCATCCACCCTGCCGTAGAGCTGTCAAACATTGCCA TTGATCATGACGACGATGACGTAACAGCGGACGATGGAGAAAGTGTCGCT GAAAATGAAATGGGCACCGCGGTCGATGAGGATTCCCTGACCGTCCACCC TGCCGTAGAGCCGACAAACATCGCCATTGACGACGATGACGTGACGGCAG ACGATGGAGAAAGTATCGCTAGCGCTGAAATATTGCTGTGGAGTGGCGTT GACCCTGCGATGACATCAAAGTCTCCTACAGGTCTCGAGTCCGCTGGATC TCCGGGCTTTCTTCACCTGATCTCCAGCGTGGATGAGCTGACTCAGGCGG TAAAGAAAGGGAACGAGGAGATGACCAAGGCGGTAAAGAAAGGGAACGAG GAGATGACCAAGGCGGTAACCAACGGGATGGAGAGGATCACCGAGAGGCT GACTGAGGAGCTGACAGAGGGGATGGCCAAGCTAAAGAACGAGATAGAGG AGCTGACCAAGGCGGTAAAGAACGAGGAGGTGGTTCCCGACTACACCCTG TTGACTAAGGTCTTGGACAGGCTGTGCCTTGTCTTGTACGTCATCGGCAT CGCCGCAGCCATTCCGATGACCATGTTTTTGAGCAAGTATTAATTCACAG CCACGCTGATCATCGTGTGCATGGGCCTGATGGGACTCTTCCTCTTCTTC ACCTTGGCCGTCATCTTTATTCACGACAAAGAGGGACGGCTGTCTCCAGT GGCGAGGGTTCTCTTTCTCCGCTACATGGCAAGGATGCTCCTTCTGGGAG ATCTCACAAAGAAGATAGAAGCCAGCATGGATACCGCGGCCGGTGAGGAT CCCCTGACCATCCACCCTGCCGTAGAGCTGTCAAACATTGCCATTGATCA TGACGACGATGACGTAACAGCGGACGATGGAGAAAGTGTCGCTGAAAATG AAATGGGCACCGCGGTCGATGAGGATTCCCTGACCGTCCACCCTGCCGTA GAGCCGACAAACATCGCCATTGACGACGATGACGTGACGGCAGACGATGG AGAAAGTATCGCTAGCGCTGAAATATTGCTGTGGAGTGGCGTTGACCCTG CGATGACATCAAAGTCTCCTACAGGTCTCGAGTCCGCTGGATCTCCGGGC TTTCTTCACCTGATCTCCAGCGTGGATGAGCTGACTCAGGCGGTAAAGAA AGGGAACGAGGAGATGACCAAGGCGGTAAAGAAAGGGAACGAGGAGATGA CCAAGGCGGTAACCAACGGGATGGAGAGGATCACCGAGAGGCTGACTGAG GAGCTGACAGAGGGGATGGCCAAGCTAAAGAACGAGATAGAGGAGCTGAC CAAGGCGGTAAAGAACGAGGAGGTGGTTCCCGACTACACCCTGTTGACTA AGGTCTTGGACAGGCTGTGCCTTGTCTTGTACGTCATCGGCATCGCCGCA GCCATTCCGATGACCATGTTTTTGAGCAAGTATTAATTCACAGCCACGCT GATCATCGTGTGCATGGGCCTGATGGGACTCTTCCTCTTCTTCACCTTGG CCGTCATCTTTATTCACGACAAAGAGGGACGGCTGTCTCCAGTGGCGAGG GTTCTCTTTCTCCGCTACATGGCAAGGATGCTCCTTCTGGGAGATCTCAC AAAGAAGATAGAAGCCAGCATGGATACCGCGGCCGGTGAGGATCCCCTGA CCATCCACCCTGCCGTAGAGCTGTCAAACATTGCCATTGATCATGACGAC GATGACGTAACAGCGGACGATGGAGAAAGTGTCGCTGAAAATGAAATGGG CACCGCGGTCGATGAGGATTCCCTGACCGTCCACCCTGCCGTAGAGCCGA CAAACATCGCCATTGACGACGATGACGTGACGGCAGACGATGGAGAAAGT ATCGCTAGCGCTGAAATATTGCTGTGGAGTGGCGTTGACCCTGCGATGAC ATCAAAGTCTCCTACAGGTCTCGAGTCCGCTGGATCTCCGGGCTTTCTTC ACCTGATCTCCAGCGTGGATGAGCTGACTCAGGCGGTAAAGAAAGGGAAC GAGGAGATGACCAAGGCGGTAAAGAAAGGGAACGAGGAGATGACCAAGGC GGTAACCAACGGGATGGAGAGGATCACCGAGAGGCTGACTGAGGAGCTGA CAGAGGGGATGGCCAAGCTAAAGAACGAGATAGAGGAGCTGACCAAGGCG GTAAAGAACGAGGAGGTGGTTCCCGACTACACCCTGTTGACTAAGGTCTT GGACAGGCTGTGCCTTGTCTTGTACGTCATCGGCATCGCCGCAGCCATTC CGATGACCATGTTTTTGAGCAAGTATTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000297 | genome | Sc0000297:276573..279839 - |
Properties
Property Name | Value |
Transcript id | BL97124_cuf0 |
Biotype | protein_coding |
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