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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97332_cuf7 >transcript:BL97332_cuf7-protein ID=transcript:BL97332_cuf7-protein|Name=transcript:BL97332_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=291bp
MTLAMAHWSCQRRCVANYSSTVVDGANFADESTEVVSIPYPQNLLMPHRP
EQYSWVAVGFTYIPDMDFYGHDQVRVYAHDQSGKRSDVLTFDFFVLENRC
MNGGLCTGPNHDPNCTDVQRSISFSGYECACPDGYFGRYCESDFNECSSD
PCPKNYTCVDLPNDFLCDCGSSDWPCASQSMPPWQIALITLMCLGVTIII
VAWGLRRKANKKKAYKIGPHHISGEDIELSNIRNERPSTFAELKRNPWIQ
PELPTEAPQAPHFPLKALKGTDANKTEESGSRRARQLPPLN Run BLAST on NCBI mRNA from alignment at Sc0000207:411657..413839+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97332_cuf7 ID=transcript:BL97332_cuf7|Name=transcript:BL97332_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2183bp|location=Sequence derived from alignment at Sc0000207:411657..413839+ (Branchiostoma lanceolatum)
CGTCAAAAACGTTCGCAGCAAGAGGAAGAATTCCTTCAAAAGGAAACATT
CTTTATCGTTGCTCTCGTAGACACATCTTTCCAAAACAGTGCACCACGTC
TCACCATTTCACCCAACCTGTGGACATATGAGGACCGCCCGATTGTTGCA
TACCTGGAAGCGATAGATGACGACGATGATGACGTAACGTTCAGCGTAGA
TAGGTCTACTGAGACGTCGCTCATTGGAGACGTTGAAATTGACCCGAGTG
GGAAACTCCACTATAGGCCATGCAAAGATTGCTTTGGTCAGGACTACGTA
ACCGTTGTAGTGAGTGAGAATAGGAACGATGGTGAAACGCCACTTGTCAC
AAGAGAGACACTCTCCATTGAGGTCCTTCCCCTCGAAGACAACCCCGATA
TCTTTGCAGTGAAGGATGGGTCGAAAGAAAACAGCACAGGTGATTCCATC
ACGGTTGCACTGGAGGAGAACACAGCGCAAAGAGCGGACCAATCGAAGTA
CGATGTCCTTGTCTTTGGAGCGGACGTAGACACGTATGATGTACCGTCCC
TAGTATTCCATGACCCTAGCAATGGCACATTGGTCGTGTCAAAGACGGTG
CGTAGCCAATTACAGTTCCACGGTAGTCGATGGCGCTAACTTTGCAGATG
AGTCGACGGAGGTAGTGTCTATCCCCTATCCACAGAATCTCCTGATGCCT
CACCGACCAGAGCAGTACTCCTGGGTAGCTGTTGGCTTCACCTACATTCC
GGACATGGACTTCTATGGACATGATCAGGTTCGTGTGTACGCTCATGACC
AGAGTGGCAAGAGGTCCGACGTACTGACCTTCGACTTCTTCGTCCTCGAA
AACCGCTGTATGAATGGTGGGTTGTGTACCGGCCCCAACCACGATCCCAA
CTGCACAGACGTACAGCGGAGCATCTCCTTCAGTGGGTACGAATGCGCAT
GCCCAGACGGCTACTTCGGAAGGTACTGCGAGAGCGACTTTAACGAATGC
TCCTCCGACCCCTGTCCGAAGAACTACACTTGTGTCGACCTTCCCAATGA
CTTCCTCTGTGATTGTGGCTCATCAGACTGGCCATGCGCGTCGCAGTCCA
TGCCACCATGGCAGATCGCACTTATTACACTCATGTGTCTTGGTGTCACC
ATCATTATCGTTGCTTGGGGCCTGCGTAGGAAAGCCAATAAGAAGAAAGC
CTACAAGATAGGGTAAGTAATACTTATGATTAAGCTATAAATGTCTTCAC
TTAGAGAATCTTGGAGAAACTGTTAACTATTCTGCTAACTAATCTGGTAG
CTAATCTGCATTTGTAAAGCACTCGCTTCCAATTACCTTTTGAAGGCATG
ACTTGTTCATAAAGAGACTTGATTATCGTACCAAACAAACTAATCATGAA
ATTGGTTTTATTTCATCTGAAGGCCACACCACATTTCTGGAGAAGACATC
GAGCTTTCCAACATACGCAATGAACGTCCGAGCACTTTCGCAGAGCTGAA
GCGGAACCCGTGGATTCAGCCTGAGCTCCCGACGGAGGCGCCACAAGCAC
CACACTTTCCCCTGAAGGCTCTGAAAGGGACAGATGCCAACAAGGTTGGA
ACCTTCCCAGATTTTCTTGGCGTAAGATTGCGGTTGATACTACGTAGGGG
ATAAACTGTGTATGCATCTTAAAAAAAAAGAAGCAATTGCTTAAATGTAC
TGATCATGCGTAACAATAGCGTTATCTTAAAGGCGTATTGTTAGTCGATT
TCTAGAATCAAGAATACTTCAGTGTCGTTAATATACCATCCATTTGCAGA
CCGTTTATACAGAATATATATCTTCCCACAGACCGAGGAGAGTGGCAGTC
GCAGAGCCCGTCAGCTGCCTCCTTTGAACTGAAGACATCCACTCACCAAC
CCGACCACGATGACATATAAACACTGACATGTGTAGCTTTGAGATTTCTG
CTTTTATTTGATTCCTTTTTACACAAGGTCACTTGATCTGGTTTACTAGT
TGAAATTGAGAGAAAATTCCTTCAACGAACATACACCATGTGAGTGAGTT
AATTTTCCAACTGGTAGAGTTGATAGTATTGAAATGGCTAAAAAGATTTA
AGTGAAATTGCTAATGTTCAAAATTGTCTGAATATGTAAGTAAGTACTGT
TTGCATCATTTATGCAAGAAGCAAAGCAAGAAG Coding sequence (CDS) from alignment at Sc0000207:411657..413839+ >transcript:BL97332_cuf7 ID=transcript:BL97332_cuf7|Name=transcript:BL97332_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=2628bp|location=Sequence derived from alignment at Sc0000207:411657..413839+ (Branchiostoma lanceolatum)
ATGACCCTAGCAATGGCACATTGGTCGTGTCAAAGACGGTGCGTAGCCAA
TTACAGTTCCACGGTAGTCGATGGCGCTAACTTTGCAGATGAGTCGACGG
AGGTAGTGTCTATCCCCTATCCACAGAATCTCCTGATGCCTCACCGACCA
GAGCAGTACTCCTGGGTAGCTGTTGGCTTCACCTACATTCCGGACATGGA
CTTCTATGGACATGATCAGGTTCGTGTGTACGCTCATGACCAGAGTGGCA
AGAGGTCCGACGTACTGACCTTCGACTTCTTCGTCCTCGAAAACCGCTGT
ATGAATGGTGGGTTGTGTACCGGCCCCAACCACGATCCCAACTGCACAGA
CGTACAGCGGAGCATCTCCTTCAGTGGGTACGAATGCGCATGCCCAGACG
GCTACTTCGGAAGGTACTGCGAGAGCGACTTTAACGAATGCTCCTCCGAC
CCCTGTCCGAAGAACTACACTTGTGTCGACCTTCCCAATGACTTCCTCTG
TGATTGTGGCTCATCAGACTGGCCATGCGCGTCGCAGTCCATGCCACCAT
GGCAGATCGCACTTATTACACTCATGTGTCTTGGTGTCACCATCATTATC
GTTGCTTGGGGCCTGCGTAGGAAAGCCAATAAGAAGAAAGCCTACAAGAT
AGGGCCACACCACATTTCTGGAGAAGACATCGAGCTTTCCAACATACGCA
ATGAACGTCCGAGCACTTTCGCAGAGCTGAAGCGGAACCCGTGGATTCAG
CCTGAGCTCCCGACGGAGGCGCCACAAGCACCACACTTTCCCCTGAAGGC
TCTGAAAGGGACAGATGCCAACAAGACCGAGGAGAGTGGCAGTCGCAGAG
CCCGTCAGCTGCCTCCTTTGAACTGAATGACCCTAGCAATGGCACATTGG
TCGTGTCAAAGACGGTGCGTAGCCAATTACAGTTCCACGGTAGTCGATGG
CGCTAACTTTGCAGATGAGTCGACGGAGGTAGTGTCTATCCCCTATCCAC
AGAATCTCCTGATGCCTCACCGACCAGAGCAGTACTCCTGGGTAGCTGTT
GGCTTCACCTACATTCCGGACATGGACTTCTATGGACATGATCAGGTTCG
TGTGTACGCTCATGACCAGAGTGGCAAGAGGTCCGACGTACTGACCTTCG
ACTTCTTCGTCCTCGAAAACCGCTGTATGAATGGTGGGTTGTGTACCGGC
CCCAACCACGATCCCAACTGCACAGACGTACAGCGGAGCATCTCCTTCAG
TGGGTACGAATGCGCATGCCCAGACGGCTACTTCGGAAGGTACTGCGAGA
GCGACTTTAACGAATGCTCCTCCGACCCCTGTCCGAAGAACTACACTTGT
GTCGACCTTCCCAATGACTTCCTCTGTGATTGTGGCTCATCAGACTGGCC
ATGCGCGTCGCAGTCCATGCCACCATGGCAGATCGCACTTATTACACTCA
TGTGTCTTGGTGTCACCATCATTATCGTTGCTTGGGGCCTGCGTAGGAAA
GCCAATAAGAAGAAAGCCTACAAGATAGGGCCACACCACATTTCTGGAGA
AGACATCGAGCTTTCCAACATACGCAATGAACGTCCGAGCACTTTCGCAG
AGCTGAAGCGGAACCCGTGGATTCAGCCTGAGCTCCCGACGGAGGCGCCA
CAAGCACCACACTTTCCCCTGAAGGCTCTGAAAGGGACAGATGCCAACAA
GACCGAGGAGAGTGGCAGTCGCAGAGCCCGTCAGCTGCCTCCTTTGAACT
GAATGACCCTAGCAATGGCACATTGGTCGTGTCAAAGACGGTGCGTAGCC
AATTACAGTTCCACGGTAGTCGATGGCGCTAACTTTGCAGATGAGTCGAC
GGAGGTAGTGTCTATCCCCTATCCACAGAATCTCCTGATGCCTCACCGAC
CAGAGCAGTACTCCTGGGTAGCTGTTGGCTTCACCTACATTCCGGACATG
GACTTCTATGGACATGATCAGGTTCGTGTGTACGCTCATGACCAGAGTGG
CAAGAGGTCCGACGTACTGACCTTCGACTTCTTCGTCCTCGAAAACCGCT
GTATGAATGGTGGGTTGTGTACCGGCCCCAACCACGATCCCAACTGCACA
GACGTACAGCGGAGCATCTCCTTCAGTGGGTACGAATGCGCATGCCCAGA
CGGCTACTTCGGAAGGTACTGCGAGAGCGACTTTAACGAATGCTCCTCCG
ACCCCTGTCCGAAGAACTACACTTGTGTCGACCTTCCCAATGACTTCCTC
TGTGATTGTGGCTCATCAGACTGGCCATGCGCGTCGCAGTCCATGCCACC
ATGGCAGATCGCACTTATTACACTCATGTGTCTTGGTGTCACCATCATTA
TCGTTGCTTGGGGCCTGCGTAGGAAAGCCAATAAGAAGAAAGCCTACAAG
ATAGGGCCACACCACATTTCTGGAGAAGACATCGAGCTTTCCAACATACG
CAATGAACGTCCGAGCACTTTCGCAGAGCTGAAGCGGAACCCGTGGATTC
AGCCTGAGCTCCCGACGGAGGCGCCACAAGCACCACACTTTCCCCTGAAG
GCTCTGAAAGGGACAGATGCCAACAAGACCGAGGAGAGTGGCAGTCGCAG
AGCCCGTCAGCTGCCTCCTTTGAACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000207 | genome | Sc0000207:411657..413839 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97332_cuf7 |
| Biotype | protein_coding |
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