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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96647_cuf1 >transcript:BL96647_cuf1-protein ID=transcript:BL96647_cuf1-protein|Name=transcript:BL96647_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=176bp
DLGLHENLLGLIGCCTLVGDHLYLITEFMPHGDLKGFLGKCKEARKSETY
YEPTSSVYNFEEKEVYKISWQIAKGMNHISQADYVHGDLAARNVLVGDNL
HVKISDFGLADHMYSRGYRRQDRLQRIPWKWMAPERLADGERYTTQSDVW
SFGIVLYEIATLGGSPYPGMPTAGLV Run BLAST on NCBI mRNA from alignment at Sc0000190:116940..119057+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96647_cuf1 ID=transcript:BL96647_cuf1|Name=transcript:BL96647_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2118bp|location=Sequence derived from alignment at Sc0000190:116940..119057+ (Branchiostoma lanceolatum)
GACCTGGGGCTGCACGAGAACCTGCTGGGTCTGATCGGCTGCTGCACGCT
GGTGGGAGACCACCTGTATCTCATCACGGAGTTCATGCCGCACGGAGATC
TAAAGGGCTTCCTCGGGAAGTGCAAGGAAGCGCGAAAGGTTGGTTGCAAA
CAAGATTTCTGTTAGGAGTGTCAGAAAATGGTTAATTAACAAGTGTTGCA
TTTATGTTATATGGAAATATGGAAATGTGGGATCCATTGGAAATATTGAT
AATACTTCACAATCGTCACTCAGTGGTAAAAGTTCATACAATAAAGAAAG
AATTATGCAACACCTTTGTAATGAAAGTTACTCTAGACGTGCCATTAATA
ATCATCGATAGGTAAACAGTTAGATGCTTTGTTGCAAATTGGGCTCCTTT
TTTTTACGGTTCCGTCGTGGTTTTTGGTTGTTGGATGCAATCAGGTTTCA
TCACAATACCGCCTCGCAGTCACCGTGCTTGTTCGGAAGAACATCACGGA
ATTGTATTTATTAATTTAGGCTCCCGTAGTCCGGTAAATTTTTTTTGCGT
TTTCATTTCTTCCAGAGTGAGACGTATTACGAGCCAACCAGCTCTGTGTA
CAACTTCGAAGAGAAAGAAGTGTACAAAATTTCCTGGCAGATTGCCAAAG
GAATGGTAAGCAGTGACTAAGGTTCCGTCCATGAACGGGCAATATGAAAA
CTACCGGGATGTTTAAGACATAACGAATGCCAGTGACATACACACTTTCT
TCCCGTAATTGTGAAATATTAAAATCACAATTGTCGAACTTTCAAGTAAA
TTGCTGAATTGACGCAGCGCTCTGCCTGTTGCTAAGGAATGGTAAGCAGC
AACTAATTAAGGTTTTGTCCATCAATGGGCAATGTGAAAATTATCGAGAT
GTTCAATTGATTATGAGCTAAATACTTCCGGGAGTATGACATATCCAGAT
TTATTGTAGTAATTAGTTTGTTTCGCGCTTATTTACGGATTGCATTCGTC
ATTTCGGATGGTGATGTAAAGCCGGCGGCCCCATGTATGAGGTAGCTTTA
GGCATTAGCTTTAAGCGTCAAACCTCTACACGTAAAAGAACCCAACACCT
CTATCGAGAAGAGTGGGGGTGACCCGGTGTGCTTGGCCCGAAACGCCAGC
CGTAGCGAAGCCGCATTGCACCACCATTATCTTCTTGAAGAAGCATCATG
CTTCACCTCAAATGAGGATGACTTGAAACGAAACAAAACGAAAAGTGGAG
CGTCCGTAAATAATGTTCCATGCTCGTCTGTTTTACAGAACCACATCTCC
CAAGCTGATTACGTCCACGGTGACCTGGCCGCCCGGAACGTGCTGGTCGG
TGACAACTTACATGTAAAGATTTCCGACTTCGGGCTGGCAGACCACATGT
ACAGCCGAGGTTACCGTCGACAGGACAGGCTTCAGAGAATCCCTTGGAAA
TGGATGGCACCAGAGCGGCTGGCGGACGGGGAACGTTACACCACACAGAG
CGATGTGTCAGTATAACCCCCCCTCTCTCTCTCTCTCTTTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTATATATATATATATATACATATCCCTCTCTCTCTCTCT
CGTTTCTGCTTTATTTTTAATACCTATCGTGTTCGTTCCAACGTTGTTCT
TTCTATCCCTAATGTTAAGATCAATATGAAGTTCAAATACCAGAATCCGA
GTGCATTCTGTCCTCTGTCCTCTGTCTCTGTTCTTTCTCTGTCTCAGTTC
TTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTCACTCACTCTC
ACTCTCTCTCTAGCTCTCTCTAGCTCTCTCCCCCTCTCTCCCCCATCTCT
TTGCGCTTGTGCTAAACCTTTAGTTCGTTATATCTTTAGCAGTCTTTCTC
TGTCCCGACTCATCCCTTTCGAATTCCCTTTAAATGCAAACCCAATGCAC
TAGTGGGAAGTATGAAATCGTACCTTTCGCCCTCAGGTGGTCGTTTGGGA
TCGTGCTGTACGAGATAGCCACGCTAGGGGGCAGCCCGTATCCCGGCATG
CCCACAGCTGGCTTGGTG Coding sequence (CDS) from alignment at Sc0000190:116940..119057+ >transcript:BL96647_cuf1 ID=transcript:BL96647_cuf1|Name=transcript:BL96647_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2112bp|location=Sequence derived from alignment at Sc0000190:116940..119057+ (Branchiostoma lanceolatum)
GACCTGGGGCTGCACGAGAACCTGCTGGGTCTGATCGGCTGCTGCACGCT
GGTGGGAGACCACCTGTATCTCATCACGGAGTTCATGCCGCACGGAGATC
TAAAGGGCTTCCTCGGGAAGTGCAAGGAAGCGCGAAAGAGTGAGACGTAT
TACGAGCCAACCAGCTCTGTGTACAACTTCGAAGAGAAAGAAGTGTACAA
AATTTCCTGGCAGATTGCCAAAGGAATGAACCACATCTCCCAAGCTGATT
ACGTCCACGGTGACCTGGCCGCCCGGAACGTGCTGGTCGGTGACAACTTA
CATGTAAAGATTTCCGACTTCGGGCTGGCAGACCACATGTACAGCCGAGG
TTACCGTCGACAGGACAGGCTTCAGAGAATCCCTTGGAAATGGATGGCAC
CAGAGCGGCTGGCGGACGGGGAACGTTACACCACACAGAGCGATGTGTGG
TCGTTTGGGATCGTGCTGTACGAGATAGCCACGCTAGGGGGCAGCCCGTA
TCCCGGCATGCCCACAGCTGGCTTGGTGGACCTGGGGCTGCACGAGAACC
TGCTGGGTCTGATCGGCTGCTGCACGCTGGTGGGAGACCACCTGTATCTC
ATCACGGAGTTCATGCCGCACGGAGATCTAAAGGGCTTCCTCGGGAAGTG
CAAGGAAGCGCGAAAGAGTGAGACGTATTACGAGCCAACCAGCTCTGTGT
ACAACTTCGAAGAGAAAGAAGTGTACAAAATTTCCTGGCAGATTGCCAAA
GGAATGAACCACATCTCCCAAGCTGATTACGTCCACGGTGACCTGGCCGC
CCGGAACGTGCTGGTCGGTGACAACTTACATGTAAAGATTTCCGACTTCG
GGCTGGCAGACCACATGTACAGCCGAGGTTACCGTCGACAGGACAGGCTT
CAGAGAATCCCTTGGAAATGGATGGCACCAGAGCGGCTGGCGGACGGGGA
ACGTTACACCACACAGAGCGATGTGTGGTCGTTTGGGATCGTGCTGTACG
AGATAGCCACGCTAGGGGGCAGCCCGTATCCCGGCATGCCCACAGCTGGC
TTGGTGGACCTGGGGCTGCACGAGAACCTGCTGGGTCTGATCGGCTGCTG
CACGCTGGTGGGAGACCACCTGTATCTCATCACGGAGTTCATGCCGCACG
GAGATCTAAAGGGCTTCCTCGGGAAGTGCAAGGAAGCGCGAAAGAGTGAG
ACGTATTACGAGCCAACCAGCTCTGTGTACAACTTCGAAGAGAAAGAAGT
GTACAAAATTTCCTGGCAGATTGCCAAAGGAATGAACCACATCTCCCAAG
CTGATTACGTCCACGGTGACCTGGCCGCCCGGAACGTGCTGGTCGGTGAC
AACTTACATGTAAAGATTTCCGACTTCGGGCTGGCAGACCACATGTACAG
CCGAGGTTACCGTCGACAGGACAGGCTTCAGAGAATCCCTTGGAAATGGA
TGGCACCAGAGCGGCTGGCGGACGGGGAACGTTACACCACACAGAGCGAT
GTGTGGTCGTTTGGGATCGTGCTGTACGAGATAGCCACGCTAGGGGGCAG
CCCGTATCCCGGCATGCCCACAGCTGGCTTGGTGGACCTGGGGCTGCACG
AGAACCTGCTGGGTCTGATCGGCTGCTGCACGCTGGTGGGAGACCACCTG
TATCTCATCACGGAGTTCATGCCGCACGGAGATCTAAAGGGCTTCCTCGG
GAAGTGCAAGGAAGCGCGAAAGAGTGAGACGTATTACGAGCCAACCAGCT
CTGTGTACAACTTCGAAGAGAAAGAAGTGTACAAAATTTCCTGGCAGATT
GCCAAAGGAATGAACCACATCTCCCAAGCTGATTACGTCCACGGTGACCT
GGCCGCCCGGAACGTGCTGGTCGGTGACAACTTACATGTAAAGATTTCCG
ACTTCGGGCTGGCAGACCACATGTACAGCCGAGGTTACCGTCGACAGGAC
AGGCTTCAGAGAATCCCTTGGAAATGGATGGCACCAGAGCGGCTGGCGGA
CGGGGAACGTTACACCACACAGAGCGATGTGTGGTCGTTTGGGATCGTGC
TGTACGAGATAGCCACGCTAGGGGGCAGCCCGTATCCCGGCATGCCCACA
GCTGGCTTGGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000190 | genome | Sc0000190:116940..119057 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96647_cuf1 |
| Biotype | protein_coding |
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