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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97147_cuf2 >transcript:BL97147_cuf2-protein ID=transcript:BL97147_cuf2-protein|Name=transcript:BL97147_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
VTFNDVEVEQNWFYALAVRHTADNSTTVSSANVQVFTVGSSGVNGSSVGN DSIQMNDSIPTNLTVDGNSTEQVSSLCPYETGLAYSQNITLIAGAGQVSV TDPVQLDRRCRYQVSVHLDGASAPVTVDSLLLIPDVTKSIV Run BLAST on NCBI mRNA from alignment at Sc0000147:159190..162390+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97147_cuf2 ID=transcript:BL97147_cuf2|Name=transcript:BL97147_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=3201bp|location=Sequence derived from alignment at Sc0000147:159190..162390+ (Branchiostoma lanceolatum) GGTGACATTCAATGATGTTGAGGTGGAACAAAACTGGTAAGTTCAGTCAT
TGAGACTATATATGATCAGATAACAGATAGACGCCATGTTGGAGCAGTCA
TTATAGTGTGTTTGGCCAAGAAACCAGCGGTTTCTGTTCCCTGTTGGCAA
CGACAGCATCCAAATGAATGACAGCATCCCAACAAACCTGACTGTAGATG
TCTTCCAATACTGTGCCCCAGTCACAGTGGATATCAACCCACTGCTTGTA
AGGCCTCAAGAAGGCTATTGGACTATCATTACCCTTCACTTTACTTTACA
TAACAGATACTGTTGTTCCAAGCTGTGATTGAAAACTTGGAGAGACACAG
TAGTTAGACAAGAAAGAGCATTCAACTTTGTCGGAACTAGCTGTTATGTG
CTTATAAGTTTATAATGTATTTTGAATACATTCTATTACTTAATGGTTTG
CTTTGATGTTTTTTTACTTTATTTTCATATGAAACATACTCTGCTCTAAT
TTGGGAATTTCCCTTGATAAAGTCTTTCACTTGATATTTCTCGCTGGCAA
GATTGGAGAATGCCAACAAGAATCTTTTTGTAAATTTCTGTTTACATGAT
ATCATGATATACATGGGGGAAATATTATCAGATTCATATGTGTGTGACAG
TTTAAATGTACATTTTTTTAAAGATTTATATTGATCTTTAGTGTCTTGAT
TATGGTAGTGTATCATATGAAAGTGGCAAAGTATACAGTATGTATAAAAC
CTTCATTGTCTTATATTAAATCAAATCTTTCAAATCTTTATTTGCTTAAA
CCTTCATACAAAAACATGCACTTCTGAATCACATCTCATTGTCGCCTTGT
ACAGGTTCTATANCAATTTACATGACTTTCCTCACTCAACCCAGATTTAA
GAATGGGTACCTGATTTCAGTTGAGGATATAACATTTTTGCAAATAACTG
CAATGTACTTACAGGTTTATAATGTCTTTTGAATAGTCTATTTTTTTTAT
TATAATGAATTGCTTTGATGTTTTCACTTCATTTTTGTATTAAACATAGT
TACCTTGCTCTGATTTAGGAATTTCCCTTGATAAGGTTCGTCACTTAATA
TTTCTCTCAAGATTGGAGAGTGCTTTATTTTGTAAAACTCTTTTTACATG
GTATAGTCCGATTCATATGTGTGTAACAGTTGAAATGTTTGTTTTGAAAA
GATTTATATCAGTGTCTTGATTATAATCATTATAGTGTACCAGGTTGAAG
TGGTGAAGCATGCACTGTGCAGAAAACCTTCATCGTCTTATATTAAATCA
AATCTTTAAAATCTTTATTTGTTTAAACCAACATTGCAGAAGTACATATA
TTCCATACAAAAACATGCACTTCTGAATCACATCTCATTGTTGCCTTGTA
CAGGTTCTACGCTCTTGCAGTGAGGCACACAGCTGACAACAGCACAACAG
TGTCATCAGCCAATGTACAGGTCTTCACCGTAGGGAGTTCAGGGGTCAAT
GGGTCATCTGTTGGCAATGACAGCATCCAAATGAATGACAGCATCCCAAC
AAACCTAACTGTAGATGGAAACAGTACAGAACAGGTGCAATCAGTTGAAT
GTTTTACAGTAACGAAGATAAGTGTTATGTAACACTAGGACAAAATAGAA
AGCAGAATTTCCTACTATTTCTTTACATTGTAGATTAGATACACACTATA
GAGTTACCCTGGTATATCAATATTCAGGAAAACTTAAAGCAAACCTTGTA
CAACTTGGTTTTTTTGCACAGTTCATAAATGCCAGAAATATGAAATAATC
ATGTAAATATCCTGAAAATTTTTTCTACATGTCTTCCAGATTAAGTTTTC
TTTTTCTCTAAAGATATTTTCAATTTTGGACCAAAATCTTTCATACTGGA
TCTTTAAAAGAAGAAAAACTATACCTCTCCTTGGTGCTGGAAATGCTGTT
ATTCCGCATGGTTATGCCATCAGATGAACTGGGCTGTCATCAGGGAGTCG
GCCTTGTCTTTTGTGTGCTCAGTCCCTGCACATGTTCAATTCTTAGGATT
GTGGACTTAATTTATTAGGTTTTTAACCTTCTCCCTGCTGCCTAAACCCA
TAACCAATGCAGATCTAATGCCCAGCTGAAAATTTAAAAAGGCAAATTGT
ACAAACATTTTACAGCAGCCGGTGCTTAGAGCGTGGACCACATTGGCGTG
ACAAGTCAACACTATTTTTCCTGAAATAAGAATGTGAGCTCGCTGAAGGG
CTATTCTTCCACTGATCGTGACAGAGAAGACAGACGTTATGTACAGTAGG
GAAACTCCCCTAGCCTTTTTTTGTCAAGTAGAACAAACAGTGAACCACAG
CTTTACGTCCTGTCATAAACACTGTGACCCTTTCCATTAGCATGTCGTGT
GAGTGACATGTTGAGTGAGTGACATCTGCCAGGATTTGAACTCCCAACCT
CTTGGTCCAAAGGCAGAGTTGCTAACCACTGGACTATGCACACTACTACT
TGCAAAGTTGAGTTTGTCTAACACTTGGCACGCTGTACATGAAACCTTGA
TCTCCAACAACTATTCTCATCTAAATCAACATCGTTGTTACCCTCATATA
GCCCCATCAGGGGCAAAGTAGGGGGGGGGGTGGAGTTAAGGTCCCGGGCT
AAGGCGGCCAGGCCTCCAGCCTGGCACAGAATGACTCAACGGTGTCAGCC
GTCACAACCGTGCCAGGCAGGGCATTTCACTGGGGAATAGTACGGGTGAA
GTATGAGTGTTCGTATGTGTCGGTTCTAGCATAGATAGTTTGAAACTTGA
GATGGTGGCTCCCCCGGGTGCGCCTCTGAGTTTCAGTAAATTGTCAGTGT
CTATATTAATATGGTTGTTAACTACATTGTAGAAGAAGGTGAGGCCTCCT
TTCAGAGGTCCTGCAGGTCATTGAGCATTTGTGTCATGCTGCTAGTCCGC
CGGATATCTAACTTTATGTCTACCTCCTGTTTTTCTTGTTTAGGTTTCCA
GCTTGTGTCCGTATGAAACAGGCCTTGCCTACTCTCAGAACATCACCCTA
ATAGCAGGAGCTGGACAGGTGTCTGTGACTGACCCTGTACAGCTGGACAG
GCGCTGCAGGTACCAGGTGTCAGTACATCTGGATGGAGCAAGTGCACCTG
TGACAGTTGACTCTTTGTTGTTGATACCTGATGTGACAAAGTCAATAGTC
T Coding sequence (CDS) from alignment at Sc0000147:159190..162390+ >transcript:BL97147_cuf2 ID=transcript:BL97147_cuf2|Name=transcript:BL97147_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1269bp|location=Sequence derived from alignment at Sc0000147:159190..162390+ (Branchiostoma lanceolatum) GTGACATTCAATGATGTTGAGGTGGAACAAAACTGGTTCTACGCTCTTGC AGTGAGGCACACAGCTGACAACAGCACAACAGTGTCATCAGCCAATGTAC AGGTCTTCACCGTAGGGAGTTCAGGGGTCAATGGGTCATCTGTTGGCAAT GACAGCATCCAAATGAATGACAGCATCCCAACAAACCTAACTGTAGATGG AAACAGTACAGAACAGGTTTCCAGCTTGTGTCCGTATGAAACAGGCCTTG CCTACTCTCAGAACATCACCCTAATAGCAGGAGCTGGACAGGTGTCTGTG ACTGACCCTGTACAGCTGGACAGGCGCTGCAGGTACCAGGTGTCAGTACA TCTGGATGGAGCAAGTGCACCTGTGACAGTTGACTCTTTGTTGTTGATAC CTGATGTGACAAAGTCAATAGTCGTGACATTCAATGATGTTGAGGTGGAA CAAAACTGGTTCTACGCTCTTGCAGTGAGGCACACAGCTGACAACAGCAC AACAGTGTCATCAGCCAATGTACAGGTCTTCACCGTAGGGAGTTCAGGGG TCAATGGGTCATCTGTTGGCAATGACAGCATCCAAATGAATGACAGCATC CCAACAAACCTAACTGTAGATGGAAACAGTACAGAACAGGTTTCCAGCTT GTGTCCGTATGAAACAGGCCTTGCCTACTCTCAGAACATCACCCTAATAG CAGGAGCTGGACAGGTGTCTGTGACTGACCCTGTACAGCTGGACAGGCGC TGCAGGTACCAGGTGTCAGTACATCTGGATGGAGCAAGTGCACCTGTGAC AGTTGACTCTTTGTTGTTGATACCTGATGTGACAAAGTCAATAGTCGTGA CATTCAATGATGTTGAGGTGGAACAAAACTGGTTCTACGCTCTTGCAGTG AGGCACACAGCTGACAACAGCACAACAGTGTCATCAGCCAATGTACAGGT CTTCACCGTAGGGAGTTCAGGGGTCAATGGGTCATCTGTTGGCAATGACA GCATCCAAATGAATGACAGCATCCCAACAAACCTAACTGTAGATGGAAAC AGTACAGAACAGGTTTCCAGCTTGTGTCCGTATGAAACAGGCCTTGCCTA CTCTCAGAACATCACCCTAATAGCAGGAGCTGGACAGGTGTCTGTGACTG ACCCTGTACAGCTGGACAGGCGCTGCAGGTACCAGGTGTCAGTACATCTG GATGGAGCAAGTGCACCTGTGACAGTTGACTCTTTGTTGTTGATACCTGA TGTGACAAAGTCAATAGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000147 | genome | Sc0000147:159190..162390 + |
Properties
Property Name | Value |
Transcript id | BL97147_cuf2 |
Biotype | protein_coding |
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