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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97342_cuf1 >transcript:BL97342_cuf1-protein ID=transcript:BL97342_cuf1-protein|Name=transcript:BL97342_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=435bp
WTCRHHKCDKPCGEPCDRPRCDRPCRKTRRCGKCKKKHPCIGMCGEPCPD
KCRVCGSEELTKILFGMEDKDDAHFVQLEDCGHVIEVSGLDQWMDTTDRK
IQLQTCPKCKTPIRHNLRYGNTIKKTLAMIEKVKKKWHDDVQMAKTEATA
DKLMRKLRDADKERYCAETSKDLLRQMKRNRQYSLDEAAMYANKVLFLNR
LAELKRKRREYFLSGHIVLLDFEEMKKEVEEREKWLRRRTARVGEQEWEE
FGREMIRLNFLLKLRVLQEEIRKKGISLDDLNKESLVLAARRLTDLKPFT
ATREELVKHVMKKIEALMPELSLALLNVCDEEPVQVVKANGLTQGHWRAC
RXNGLTQGHWCACRNGHVYAIEDIGRTTMESPCPECHAEIEEVRHRGCQP
QASVGQPSGTGEGRSEARRVVRPDKATLKKRKSMA Run BLAST on NCBI mRNA from alignment at Sc0000070:734291..736568+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97342_cuf1 ID=transcript:BL97342_cuf1|Name=transcript:BL97342_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2278bp|location=Sequence derived from alignment at Sc0000070:734291..736568+ (Branchiostoma lanceolatum)
AGTGGACATGCAGACATCACAAGTGTGACAAGCCCTGTGGCGAACCTTGC
GATCGTCCTCGATGTGACCGCCCCTGCCGAAAGACCCGGCGCTGTGGCAA
GTGCAAGAAAAAACATCCATGCATCGGCATGTGTGGGGAACCATGTCCGG
ACAAGTGTCGCGTTTGTGGTAGTGAAGAGTTGACAAAAATCCTCTTCGGT
ATGGAAGACAAAGATGACGCCCATTTCGTGCAGCTGGAGGATTGCGGTCA
CGTGATAGAAGTCAGCGGTCTGGACCAGTGGATGGACACCACCGACAGAA
AAATCCAACTCCAAACCTGCCCGAAATGCAAGACACCAATACGACACAAC
CTACGCTACGGTAACACCATCAAGAAGACACTGGCAATGATCGAGAAGGT
TAAGAAGAAGTGGCACGACGACGTTCAAATGGCAAAGACAGAAGCCACCG
CTGATAAGCTTATGAGAAAGCTCCGAGATGCGGACAAGGAAAGATATTGC
GCAGAGACCTCAAAGGATCTCCTTCGGCAAATGAAACGCAATCGACAGTA
CTCATTGGACGAGGCGGCCATGTATGCAAACAAAGTCCTCTTCCTGAACA
GACTTGCTGAACTTAAGAGAAAGAGGAGAGAGTATTTTCTCTCTGGCCAT
ATAGTACTTCTGGATTTCGAGGAAATGAAGAAGGAGGTCGAAGAGAGGGA
AAAGTGGCTGCGTCGCCGAACGGCCCGTGTGGGGGAACAGGTAAAGCTAG
AATTATTTGTACTACAATCGACTAAACTATCCATAATGATGTACATTCAA
GTGCAAGGTGTCCGGTTAGATTTGATAAGTTCGCAATTCGCAAAGGGGCG
CAATTCATATATTTCAATAATCTGATCATCTGAGCTTCGCAAAGTTGGTG
CAACTTAGCTCGATTTGGCACAGTCCCGTGAGATACCCGCTTAAGTCACT
CGGTACTCATCGCAAAATGGCTTCTGTTCACAGGAGTGGGAGGAGTTTGG
GAGAGAGATGATCCGACTGAACTTTCTCCTGAAGCTCCGCGTCCTGCAGG
AAGAGATTCGGAAGAAGGGAATCAGCCTGGACGACCTTAACAAGGAAAGT
CTCGTCCTAGCGGCACGCAGGCTGACTGACCTGAAACCTTTCACCGCGAC
CAGAGAGGAACTGGTAAAACACGTTATGAAGAAGATCGAAGCGCTTATGC
CTGAACTAAGCCTAGCCCTGCTCAACGTCTGCGATGAGGAGCCAGTTCAA
GTGGTGAAGGCCAATGGACTGACACAGGGACACTGGCGCGCATGTCGCAN
CAATGGACTGACCCAGGGACACTGGTGCGCATGTCGCAACGGACATGTGT
ACGCTATTGAAGACATTGGAAGAACCACGATGGTAAACATTGATTTGCAT
ATCTTTGGCATATATCTTAAGCATATCGAAATATTTGGCATCTTCTTTGG
TATAAAACATTATAACAGTATATCAGGGTTTTACTCCGTAAAAAAAGTTC
ACAATCTCTTTCAACTGTTCTCGACAGGAAAGCCCTTGCCCGGAGTGTCA
TGCTGAAATCGAAGAAGTTCGCCATAGGGGATGTCAGCCGCAGGCTTCGG
TCGGACAACCGTCTGGCACCGGAGAAGGACGGAGCGAGGCACGCCGTGTA
GTCCGACCAGATAAGGCCACTTTGAAGAAAAGAAAGTCTATGGCTTGAAT
TTCGACGGCTAGGTGACATAGGCTTGTTAATCTAAACATTACAATTAAAC
AACAAGTATGCTTGATTCCCTACCGTTTAAAACAGATTGATGGAAATATC
AACTAACCAGTGTGTTTTATGACCTAGACAGTGTTACTTATTAACTAGTG
TAATTCATCAACTAGTGTGATTTATTAATCTGACAATGGATGCCGTGAAC
GACTGATTGATACTGAATCGATTATTTGTGGTATTGATCATAATTGATGT
ACAAAGTGTTGTATCTTTTATTTTAATGTGATGGATAGTGAATTTTACGA
GTCGTCCTTTCATTACTTTCAAATAGATCAAATAATACATATGGACGTTA
ATTGACGTTTGGTGTCATTCAGTGCTGCCCAACACACCAATTATATTTGA
AGGAATGCTGCATAGTTCCTAAGTCGAGTTTTGGTGTAATGAAAACAACA
CACGACATTCTCCTCTAAAGGTAGTTAGAGATCATATGAAACCAAATTAC
AACATTTATTTTTTTCATATCCAACAATATTCAACAACAATGATGACATT
CATAAATCGGTTTTAATTTCATTCCAAG Coding sequence (CDS) from alignment at Sc0000070:734291..736568+ >transcript:BL97342_cuf1 ID=transcript:BL97342_cuf1|Name=transcript:BL97342_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=3924bp|location=Sequence derived from alignment at Sc0000070:734291..736568+ (Branchiostoma lanceolatum)
TGGACATGCAGACATCACAAGTGTGACAAGCCCTGTGGCGAACCTTGCGA
TCGTCCTCGATGTGACCGCCCCTGCCGAAAGACCCGGCGCTGTGGCAAGT
GCAAGAAAAAACATCCATGCATCGGCATGTGTGGGGAACCATGTCCGGAC
AAGTGTCGCGTTTGTGGTAGTGAAGAGTTGACAAAAATCCTCTTCGGTAT
GGAAGACAAAGATGACGCCCATTTCGTGCAGCTGGAGGATTGCGGTCACG
TGATAGAAGTCAGCGGTCTGGACCAGTGGATGGACACCACCGACAGAAAA
ATCCAACTCCAAACCTGCCCGAAATGCAAGACACCAATACGACACAACCT
ACGCTACGGTAACACCATCAAGAAGACACTGGCAATGATCGAGAAGGTTA
AGAAGAAGTGGCACGACGACGTTCAAATGGCAAAGACAGAAGCCACCGCT
GATAAGCTTATGAGAAAGCTCCGAGATGCGGACAAGGAAAGATATTGCGC
AGAGACCTCAAAGGATCTCCTTCGGCAAATGAAACGCAATCGACAGTACT
CATTGGACGAGGCGGCCATGTATGCAAACAAAGTCCTCTTCCTGAACAGA
CTTGCTGAACTTAAGAGAAAGAGGAGAGAGTATTTTCTCTCTGGCCATAT
AGTACTTCTGGATTTCGAGGAAATGAAGAAGGAGGTCGAAGAGAGGGAAA
AGTGGCTGCGTCGCCGAACGGCCCGTGTGGGGGAACAGGAGTGGGAGGAG
TTTGGGAGAGAGATGATCCGACTGAACTTTCTCCTGAAGCTCCGCGTCCT
GCAGGAAGAGATTCGGAAGAAGGGAATCAGCCTGGACGACCTTAACAAGG
AAAGTCTCGTCCTAGCGGCACGCAGGCTGACTGACCTGAAACCTTTCACC
GCGACCAGAGAGGAACTGGTAAAACACGTTATGAAGAAGATCGAAGCGCT
TATGCCTGAACTAAGCCTAGCCCTGCTCAACGTCTGCGATGAGGAGCCAG
TTCAAGTGGTGAAGGCCAATGGACTGACACAGGGACACTGGCGCGCATGT
CGCANCAATGGACTGACCCAGGGACACTGGTGCGCATGTCGCAACGGACA
TGTGTACGCTATTGAAGACATTGGAAGAACCACGATGGAAAGCCCTTGCC
CGGAGTGTCATGCTGAAATCGAAGAAGTTCGCCATAGGGGATGTCAGCCG
CAGGCTTCGGTCGGACAACCGTCTGGCACCGGAGAAGGACGGAGCGAGGC
ACGCCGTGTAGTCCGACCAGATAAGGCCACTTTGAAGAAAAGAAAGTCTA
TGGCTTGATGGACATGCAGACATCACAAGTGTGACAAGCCCTGTGGCGAA
CCTTGCGATCGTCCTCGATGTGACCGCCCCTGCCGAAAGACCCGGCGCTG
TGGCAAGTGCAAGAAAAAACATCCATGCATCGGCATGTGTGGGGAACCAT
GTCCGGACAAGTGTCGCGTTTGTGGTAGTGAAGAGTTGACAAAAATCCTC
TTCGGTATGGAAGACAAAGATGACGCCCATTTCGTGCAGCTGGAGGATTG
CGGTCACGTGATAGAAGTCAGCGGTCTGGACCAGTGGATGGACACCACCG
ACAGAAAAATCCAACTCCAAACCTGCCCGAAATGCAAGACACCAATACGA
CACAACCTACGCTACGGTAACACCATCAAGAAGACACTGGCAATGATCGA
GAAGGTTAAGAAGAAGTGGCACGACGACGTTCAAATGGCAAAGACAGAAG
CCACCGCTGATAAGCTTATGAGAAAGCTCCGAGATGCGGACAAGGAAAGA
TATTGCGCAGAGACCTCAAAGGATCTCCTTCGGCAAATGAAACGCAATCG
ACAGTACTCATTGGACGAGGCGGCCATGTATGCAAACAAAGTCCTCTTCC
TGAACAGACTTGCTGAACTTAAGAGAAAGAGGAGAGAGTATTTTCTCTCT
GGCCATATAGTACTTCTGGATTTCGAGGAAATGAAGAAGGAGGTCGAAGA
GAGGGAAAAGTGGCTGCGTCGCCGAACGGCCCGTGTGGGGGAACAGGAGT
GGGAGGAGTTTGGGAGAGAGATGATCCGACTGAACTTTCTCCTGAAGCTC
CGCGTCCTGCAGGAAGAGATTCGGAAGAAGGGAATCAGCCTGGACGACCT
TAACAAGGAAAGTCTCGTCCTAGCGGCACGCAGGCTGACTGACCTGAAAC
CTTTCACCGCGACCAGAGAGGAACTGGTAAAACACGTTATGAAGAAGATC
GAAGCGCTTATGCCTGAACTAAGCCTAGCCCTGCTCAACGTCTGCGATGA
GGAGCCAGTTCAAGTGGTGAAGGCCAATGGACTGACACAGGGACACTGGC
GCGCATGTCGCANCAATGGACTGACCCAGGGACACTGGTGCGCATGTCGC
AACGGACATGTGTACGCTATTGAAGACATTGGAAGAACCACGATGGAAAG
CCCTTGCCCGGAGTGTCATGCTGAAATCGAAGAAGTTCGCCATAGGGGAT
GTCAGCCGCAGGCTTCGGTCGGACAACCGTCTGGCACCGGAGAAGGACGG
AGCGAGGCACGCCGTGTAGTCCGACCAGATAAGGCCACTTTGAAGAAAAG
AAAGTCTATGGCTTGATGGACATGCAGACATCACAAGTGTGACAAGCCCT
GTGGCGAACCTTGCGATCGTCCTCGATGTGACCGCCCCTGCCGAAAGACC
CGGCGCTGTGGCAAGTGCAAGAAAAAACATCCATGCATCGGCATGTGTGG
GGAACCATGTCCGGACAAGTGTCGCGTTTGTGGTAGTGAAGAGTTGACAA
AAATCCTCTTCGGTATGGAAGACAAAGATGACGCCCATTTCGTGCAGCTG
GAGGATTGCGGTCACGTGATAGAAGTCAGCGGTCTGGACCAGTGGATGGA
CACCACCGACAGAAAAATCCAACTCCAAACCTGCCCGAAATGCAAGACAC
CAATACGACACAACCTACGCTACGGTAACACCATCAAGAAGACACTGGCA
ATGATCGAGAAGGTTAAGAAGAAGTGGCACGACGACGTTCAAATGGCAAA
GACAGAAGCCACCGCTGATAAGCTTATGAGAAAGCTCCGAGATGCGGACA
AGGAAAGATATTGCGCAGAGACCTCAAAGGATCTCCTTCGGCAAATGAAA
CGCAATCGACAGTACTCATTGGACGAGGCGGCCATGTATGCAAACAAAGT
CCTCTTCCTGAACAGACTTGCTGAACTTAAGAGAAAGAGGAGAGAGTATT
TTCTCTCTGGCCATATAGTACTTCTGGATTTCGAGGAAATGAAGAAGGAG
GTCGAAGAGAGGGAAAAGTGGCTGCGTCGCCGAACGGCCCGTGTGGGGGA
ACAGGAGTGGGAGGAGTTTGGGAGAGAGATGATCCGACTGAACTTTCTCC
TGAAGCTCCGCGTCCTGCAGGAAGAGATTCGGAAGAAGGGAATCAGCCTG
GACGACCTTAACAAGGAAAGTCTCGTCCTAGCGGCACGCAGGCTGACTGA
CCTGAAACCTTTCACCGCGACCAGAGAGGAACTGGTAAAACACGTTATGA
AGAAGATCGAAGCGCTTATGCCTGAACTAAGCCTAGCCCTGCTCAACGTC
TGCGATGAGGAGCCAGTTCAAGTGGTGAAGGCCAATGGACTGACACAGGG
ACACTGGCGCGCATGTCGCANCAATGGACTGACCCAGGGACACTGGTGCG
CATGTCGCAACGGACATGTGTACGCTATTGAAGACATTGGAAGAACCACG
ATGGAAAGCCCTTGCCCGGAGTGTCATGCTGAAATCGAAGAAGTTCGCCA
TAGGGGATGTCAGCCGCAGGCTTCGGTCGGACAACCGTCTGGCACCGGAG
AAGGACGGAGCGAGGCACGCCGTGTAGTCCGACCAGATAAGGCCACTTTG
AAGAAAAGAAAGTCTATGGCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000070 | genome | Sc0000070:734291..736568 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97342_cuf1 |
| Biotype | protein_coding |
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