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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96945_cuf17 >transcript:BL96945_cuf17-protein ID=transcript:BL96945_cuf17-protein|Name=transcript:BL96945_cuf17|organism=Branchiostoma lanceolatum|type=polypeptide|length=173bp
STVIDFTALGSLKEVLPEALCQNAADVINSWLTSTTPKPTTKPTTTSRPD DPPVAEAGVDQTVQSTQTAVMLDGSGSHDDHGIVSWLWQYPDQNLPLSLG DTTSPTMAVSGLVPGEYTFTLTVTDASGQQDTDDVTIVVTKPTTPAPTTT KGTTTPTAPLDHPPVAFAGADEI Run BLAST on NCBI mRNA from alignment at Sc0000044:1015725..1018362+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96945_cuf17 ID=transcript:BL96945_cuf17|Name=transcript:BL96945_cuf17|organism=Branchiostoma lanceolatum|type=mRNA|length=2638bp|location=Sequence derived from alignment at Sc0000044:1015725..1018362+ (Branchiostoma lanceolatum) CTCGACTGTCATCGATTTCACAGCACTGGGGTCGCTCAAGGAGGTTCTAC
CAGAGGCACTGTGTCAGAGTACGTAATATTGCTTTAACCTTCTGTGTTAA
GATTATGGGTTAAGTAGCAAGGGAATGGTTAAGGTATAACTGCAGTAAGT
CGCCAGCAGTCCTGTCTACGCCTCGACTGTCATCGACTTAATTCATTTCA
CAGCGCTAGGATCGCTTAAGAAGGTCCTAGCGGAGACGCTGTGCCAGAGT
ACGTAGTATAATATCTAACCTTAAGCATGCAAAAGTCTTTGTTTAGTCAG
ATACAATTTTGCATACGTGTAGAGATAGATAGATAGATAGATAGATAAAT
AAATAGATCGATCGATAGATAGATAGATGATTTTTACGACAAAGACACCT
TGACAATTCATTCTACATATTACTTCATTGCCGCCTGTATTGATAGTCCT
ATGCCCATGCACTTCCCTACAGATGCTGCTGACGTCATCAACAGCTGGCT
GACGTCAACCACCCCCAAACCAACCACGAAACCGACCACCACATCCAGGC
CAGGTAGATAAAAAACGACGTTGAATTTTCTGTACCCTAGTCCAATTTAC
TAGCAGTAGGACTTGGTAGATAAGCTGCATACCTGGTGGCGCTGTGGCAA
GATGAAGAGCCGGTTTTACGTCAAAAACTGTACCATTTATAATATGCAAG
GTTACGATTTAATATACAATTGATACAATATGCATGGTGGGATTTGATGT
CACACAAATAATGTGTAAGGATGATCAAACGAAAACATCGGGGCTGAGTA
ACAATGTGTGATAGCAGCTAAAAAATTGAAAAGATTGCCACACACATTTC
ACAAATTCCTTTTCTATACTTGACATGGCTTTGCACCATTTTTGACAAAG
TTGTCTTTTTTCTAGGTATTCAAATTATATATCTTCAGACAGCCCTTTGT
AGGTTGAGATTGAATCACGTACTGATTTTTGTTGAATAATTTCACGGGAA
GTTGCTGAAAGGTTGGAATGTATAACATGTTATTTTTTCCGTATCTCCAG
ACGACCCCCCTGTCGCTGAAGCTGGCGTGGACCAGACCGTGCAGAGCACC
CAGACGGCCGTGATGCTGGACGGGTCCGGTAGTCATGACGACCACGGCAT
CGTCTCCTGGCTCTGGCAGTACCCCGACCAGAACCTGCCTCTCAGTCTGG
GGGTAAGGCATGATATAACTCACTGTTATTCTGCTGGTAAACTGTTAGTT
AATAGCTATAGGTATCAATGTTATCAATTGTGCCATGTGTTGATGACGAC
AACAGTTTCGTCCCCTGGCTATTGCAGTATCCTGACCAGAACCTACTTCT
TAGTCTTAGGATGAAAATCACGGCGTTTTAGAATATCCACACATATGATT
ATCCTTTTCATATAAACCAAATTGCTATAATTCTAAAGAGTTCGGAAACT
TCCGATTCACTCTGCATCCTACCTGCTCTGCTCAGCTTGCCATTTTGACC
CGAAGATGGATAGGTCACTTTTGATCATGTAAAATCATAAATTTCCATGT
ATTTTAACCATGATATATGTTGATTTAAGTAGACGTTAGTTATACTCGTA
ACTTTGATGTCAAGATCAGTTGGGAAAGCGAACTGAGGAACAAGTGCGTA
ATCATATTGTTTTTCAGTCAGTCTAGTAAAAATTCTACTAAAATTTAAAG
ATTAAGACCTTTTAACTGCGCAGGATACAAGTTCAGATTCAAATCAAAAT
GACTTTATCTAAACTGTACGTTCCATCACTTCCCAGGATACGACCTCCCC
GACCATGGCCGTGAGCGGGCTGGTTCCCGGAGAGTACACCTTCACCTTGA
CCGTGACCGACGCGTCAGGACAGCAGGACACTGATGACGTCACTATCGTG
GTGACCAAACCGACCACACCTGCCCCGACAACCACCAAGGGAACCACAAC
ACCCACTGCGCGTAAGGGGGAAATACATTTTCATTTGTAGATTCATTGTG
AGAAGGCATGTTCTGATCTCTATGTAGGGTTTTCGTGCCCCCAATTGACC
AGAGCTCAGCTTATAGTCTGACATCTTCAACAGGTCTCTGTCCACCTGTT
ACTAAGCTTGCTTTTTGGGTGCCTTTTCAGTGATATCGTGTTACAATGAA
TTGGGGGATAATCACGGATTTCGGGATCTTTTGTTGTAACGATGAGTCTT
TTCTTCATTTGCCTTTCTTCGTATTGTGAGAGTATCTAAATATATTGAGA
TCTGGTACTCTCTTTGCCTTTAGTTAACAGCCTAAACCCACTGACAGGTT
TTTTTAGAAGAGTAACAATATGCCTTTCTGATCGTCCCCAGCTTTAGAAC
ACCCCCCTGTGGCGTTTGCCAGCGCTGACTAAGCGTTAATCTGTTCTAAT
AGTCTAACAGTTATGACAGATACATGTAGCTTTACCTTAGTAACAACGTG
CCTTTCTGATCGTCCCCAGCCGTGGACCACCCTCCCGTGGCGTTTGCCGG
CACTGACGAGATCGTTCACCTACCCTTAGAGCCTAAACATACCGACATAC
ATCTTAACAAGAGTAACAAAACGCGTTTCTGGTTTTCCGCAGCCCTAGAC
CACCCTCCTGTGGCGTTTGCCGGCGCGGACGAGATCGT Coding sequence (CDS) from alignment at Sc0000044:1015725..1018362+ >transcript:BL96945_cuf17 ID=transcript:BL96945_cuf17|Name=transcript:BL96945_cuf17|organism=Branchiostoma lanceolatum|type=CDS|length=2595bp|location=Sequence derived from alignment at Sc0000044:1015725..1018362+ (Branchiostoma lanceolatum) TCGACTGTCATCGATTTCACAGCACTGGGGTCGCTCAAGGAGGTTCTACC AGAGGCACTGTGTCAGAATGCTGCTGACGTCATCAACAGCTGGCTGACGT CAACCACCCCCAAACCAACCACGAAACCGACCACCACATCCAGGCCAGAC GACCCCCCTGTCGCTGAAGCTGGCGTGGACCAGACCGTGCAGAGCACCCA GACGGCCGTGATGCTGGACGGGTCCGGTAGTCATGACGACCACGGCATCG TCTCCTGGCTCTGGCAGTACCCCGACCAGAACCTGCCTCTCAGTCTGGGG GATACGACCTCCCCGACCATGGCCGTGAGCGGGCTGGTTCCCGGAGAGTA CACCTTCACCTTGACCGTGACCGACGCGTCAGGACAGCAGGACACTGATG ACGTCACTATCGTGGTGACCAAACCGACCACACCTGCCCCGACAACCACC AAGGGAACCACAACACCCACTGCGCCCCTAGACCACCCTCCTGTGGCGTT TGCCGGCGCGGACGAGATCTCGACTGTCATCGATTTCACAGCACTGGGGT CGCTCAAGGAGGTTCTACCAGAGGCACTGTGTCAGAATGCTGCTGACGTC ATCAACAGCTGGCTGACGTCAACCACCCCCAAACCAACCACGAAACCGAC CACCACATCCAGGCCAGACGACCCCCCTGTCGCTGAAGCTGGCGTGGACC AGACCGTGCAGAGCACCCAGACGGCCGTGATGCTGGACGGGTCCGGTAGT CATGACGACCACGGCATCGTCTCCTGGCTCTGGCAGTACCCCGACCAGAA CCTGCCTCTCAGTCTGGGGGATACGACCTCCCCGACCATGGCCGTGAGCG GGCTGGTTCCCGGAGAGTACACCTTCACCTTGACCGTGACCGACGCGTCA GGACAGCAGGACACTGATGACGTCACTATCGTGGTGACCAAACCGACCAC ACCTGCCCCGACAACCACCAAGGGAACCACAACACCCACTGCGCCCCTAG ACCACCCTCCTGTGGCGTTTGCCGGCGCGGACGAGATCTCGACTGTCATC GATTTCACAGCACTGGGGTCGCTCAAGGAGGTTCTACCAGAGGCACTGTG TCAGAATGCTGCTGACGTCATCAACAGCTGGCTGACGTCAACCACCCCCA AACCAACCACGAAACCGACCACCACATCCAGGCCAGACGACCCCCCTGTC GCTGAAGCTGGCGTGGACCAGACCGTGCAGAGCACCCAGACGGCCGTGAT GCTGGACGGGTCCGGTAGTCATGACGACCACGGCATCGTCTCCTGGCTCT GGCAGTACCCCGACCAGAACCTGCCTCTCAGTCTGGGGGATACGACCTCC CCGACCATGGCCGTGAGCGGGCTGGTTCCCGGAGAGTACACCTTCACCTT GACCGTGACCGACGCGTCAGGACAGCAGGACACTGATGACGTCACTATCG TGGTGACCAAACCGACCACACCTGCCCCGACAACCACCAAGGGAACCACA ACACCCACTGCGCCCCTAGACCACCCTCCTGTGGCGTTTGCCGGCGCGGA CGAGATCTCGACTGTCATCGATTTCACAGCACTGGGGTCGCTCAAGGAGG TTCTACCAGAGGCACTGTGTCAGAATGCTGCTGACGTCATCAACAGCTGG CTGACGTCAACCACCCCCAAACCAACCACGAAACCGACCACCACATCCAG GCCAGACGACCCCCCTGTCGCTGAAGCTGGCGTGGACCAGACCGTGCAGA GCACCCAGACGGCCGTGATGCTGGACGGGTCCGGTAGTCATGACGACCAC GGCATCGTCTCCTGGCTCTGGCAGTACCCCGACCAGAACCTGCCTCTCAG TCTGGGGGATACGACCTCCCCGACCATGGCCGTGAGCGGGCTGGTTCCCG GAGAGTACACCTTCACCTTGACCGTGACCGACGCGTCAGGACAGCAGGAC ACTGATGACGTCACTATCGTGGTGACCAAACCGACCACACCTGCCCCGAC AACCACCAAGGGAACCACAACACCCACTGCGCCCCTAGACCACCCTCCTG TGGCGTTTGCCGGCGCGGACGAGATCTCGACTGTCATCGATTTCACAGCA CTGGGGTCGCTCAAGGAGGTTCTACCAGAGGCACTGTGTCAGAATGCTGC TGACGTCATCAACAGCTGGCTGACGTCAACCACCCCCAAACCAACCACGA AACCGACCACCACATCCAGGCCAGACGACCCCCCTGTCGCTGAAGCTGGC GTGGACCAGACCGTGCAGAGCACCCAGACGGCCGTGATGCTGGACGGGTC CGGTAGTCATGACGACCACGGCATCGTCTCCTGGCTCTGGCAGTACCCCG ACCAGAACCTGCCTCTCAGTCTGGGGGATACGACCTCCCCGACCATGGCC GTGAGCGGGCTGGTTCCCGGAGAGTACACCTTCACCTTGACCGTGACCGA CGCGTCAGGACAGCAGGACACTGATGACGTCACTATCGTGGTGACCAAAC CGACCACACCTGCCCCGACAACCACCAAGGGAACCACAACACCCACTGCG CCCCTAGACCACCCTCCTGTGGCGTTTGCCGGCGCGGACGAGATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000044 | genome | Sc0000044:1015725..1018362 + |
Properties
Property Name | Value |
Transcript id | BL96945_cuf17 |
Biotype | protein_coding |
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