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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97132_cuf0 >transcript:BL97132_cuf0-protein ID=transcript:BL97132_cuf0-protein|Name=transcript:BL97132_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=332bp
CDADPFFFPADTMDCNVCFAATSAIEQTLQCHRRSSTSDVHVNNHPCDSY SLATHEGEWYRRDKIFAKDDREACFSLHLSRIPTFHIATTVGPCIILVVL MTITFIMPVDKGDRISYGVTIQLSMVVSLVFVTEVLPVKGALPFFATLII VCMGLMGIFLFVTMGVIYIHGKEGRLSPMARAVLLRYMARVLLLGDLTKE KQASNGTGEAGLTDHQDVVLTNIAFATSCEDPEMTREASEPPKGPESTGS PGFRQLIASMDEMTKAVKRGTERMTEGMTELKNEMEELTKAVKSEEVVSD YTLLAKVLDRLCLVLYVISIAAAIPMTMYLSK Run BLAST on NCBI mRNA from alignment at Sc0000040:1770507..1773171- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97132_cuf0 ID=transcript:BL97132_cuf0|Name=transcript:BL97132_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2665bp|location=Sequence derived from alignment at Sc0000040:1770507..1773171- (Branchiostoma lanceolatum) GTGTGATGCTGACCCGTTCTTCTTCCCTGCAGACACCATGGATTGCAACG
TCTGTTTTGCAGCAACCTCAGCAATCGAGCAAACCCTACGTAAGGTTTTT
AGATATTTTGATGTACATCTATATGACAGAGCATTTACTAACACTTTTAC
TATTGCATTACCTGAAGGGAAAGGTATTCCCAATATTACACAATATCCAG
GAATCGGCAGATCTTTTAAGGGACTGTAATGATCATGATGTATTTACTAC
AGAATGCCATCGGAGAAGCTCCACATCAGATGTACATGTAAACAACCATC
CTTGTGACTCTTACTCCCTTGCAACACATGAGGGAGAATGGTATCGGAGG
GATAAGATCTTTGCAAAAGACGACAGGGAGGCGTGTTTTTCTCTCCATCT
GTCGAGGATCCCCACGTTCCACATCGCCACGACTGTTGGACCCTGCATCA
TCCTGGTTGTACTGATGACCATCACCTTCATCATGCCCGTAGACAAGGGA
GACCGGATCTCGTATGGAGTGACCATTCAACTCTCCATGGTCGTGTCTCT
TGTATTTGTTACGGAGGTTCTTCCTGTCAAGGGGGCTCTACCATTTTTCG
GTGAGCACTGACACTTCAGTTGATAATAATGATTTAACTGTAACATTTTC
CAGGAAACTATTGAAATGCGCTGCCAAACAATTTGTGCTGCCAATTTCCT
AATAATTCTAGTAACCATTGAAATTATTTGCTATCTTCGAATTTCACAGC
CACGCTGATCATTGTGTGCATGGGCCTGATGGGAATCTTTCTCTTCGTCA
CCATGGGCGTCATCTATATCCACGGCAAAGAGGGCCGCCTGTCTCCGATG
GCGAGGGCTGTTCTTCTCCGCTACATGGCAAGGTACTGAATATTAGTCTT
TATATCATTCCCGGGCCGCGATAACCTTCGACACGTGTGTTCGGACCGGT
CCGCACTTTACGGGACAGGCCGTGCTTCCCTCGTTCGATTCGAACGATTC
GAATTCGCAATTCGAATACCCAAGGACATTATATAGGAATGTCCTTGGAA
TACCCAATTCGAACGTTGAAATCAATGTTGATACATTGTTTTGTTTGAGG
TCACAAACCTTTCTCAACTTCTGGCGAATTTCGCATTGAAGTGTGTTTGT
TTTCGTGTGGGTATGACACCGATAGAACTCCGGCAACACGGTGTATTTTG
CATCACCCTCGGTCTCTGCCCTCCTGTGGATCGGCACCTCGGGAGATAAG
GAATACACAGTGTTGTAATCTATATTCATATCATTGGTGTCCGGTATCAT
ATAGAGAGGTCGTTCATTTAGGAATTCTTGACCATGTATTCCTTTCTGAG
ACCTCAACGGAGAACAATATGTTGTTATGGAATATGTACCATGTACGTAT
TCTATCCACCAAATGCTTGCCGGTGCTAGTTTACTCATCTTCGGTTAGTT
GGCAATTTTTAAAGATAGAATCATGAATGGCTTAATGAGTCAATGCCTTG
TTGACTCAAAGGAAAGTCTACGAAGCTTTGGGGAATGATTCAAGGCATCT
ATGCAGCTTGCTTACGAACTGTAGATCAGATGTGCTATCGTGTCAATTTG
CAGACACTTGCACGTAGAGGGGCATCAACTTCATTTTGTATATCATATCA
TTTGTAAAGGGTGCTACTTCTGGGAGATCTCACAAAGGAGAAGCAAGCAA
GCAATGGTACCGGCGAAGCTGGCCTGACTGACCACCAAGACGTAGTGCTG
ACAAACATCGCCTTCGCCACGAGTTGTGAAGACCCCGAGATGACCAGAGA
GGCATCAGAGCCTCCTAAAGGTCCCGAGTCCACTGGATCCCCAGGGTTTC
GTCAGCTGATCGCAAGTATGGATGAGATGACCAAGGCGGTAAAGAGAGGG
ACGGAGAGGATGACAGAGGGAATGACCGAGTTGAAGAACGAAATGGAGGA
GCTGACCAAGGCGGTAAAGAGCGAGGAGGTGGTGTCCGACTACACCCTGC
TGGCTAAGGTCCTGGACAGGCTGTGTCTTGTCCTGTACGTCATCAGTATC
GCAGCAGCCATTCCGATGACCATGTATTTGAGCAAGTAAAAGAATATAGA
TGCAAAGGTAATAAGATGTAGTAGCTGTGTGCGGCAGACTATGTCAAAAA
GTCTGCACGTTTCGGTAAATAACAGCCCTGTAGTATAGATATTTTTAGCA
CAATTTGTCCAATGAGCAGATCTTGTGAAGGTTAGTAATTTTTGCATGTT
TTGCATAAACGATTTTTCAAAGATGGCTTATGACTTATCTATTGTAGGGC
TTTAGAAATGCCTGAGGTTTTAAGAAGTTTCCACCTGACTCTCTCTAGAG
TTTCTGTCACTAAGTTGAACTCGATACGTATGATATTGAGATTTCAGTCG
TCTTGTGAAGTAGCTTAGCTGAATGTATTGTGTGATAAGCTTTTTGGTTG
AAAGATATTTGCATGACGAAGTTTCATATACCTGTAGTAATAAAACTTTA
AAGTATCAACAGCTGAACAACGTGACTTATCTTTTCTTTATTACCATTTT
GCATTGTTAAGATATCGAGCCTTTGCCATTCACCGACACGTGTTTGGTCT
TTCGATAAAGATATTTGTATAACTTTATGATTGTGCATGATGATGTGAAA
AAAAATGCCGGAGAC Coding sequence (CDS) from alignment at Sc0000040:1770507..1773171- >transcript:BL97132_cuf0 ID=transcript:BL97132_cuf0|Name=transcript:BL97132_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=3996bp|location=Sequence derived from alignment at Sc0000040:1770507..1773171- (Branchiostoma lanceolatum) TGTGATGCTGACCCGTTCTTCTTCCCTGCAGACACCATGGATTGCAACGT CTGTTTTGCAGCAACCTCAGCAATCGAGCAAACCCTACAATGCCATCGGA GAAGCTCCACATCAGATGTACATGTAAACAACCATCCTTGTGACTCTTAC TCCCTTGCAACACATGAGGGAGAATGGTATCGGAGGGATAAGATCTTTGC AAAAGACGACAGGGAGGCGTGTTTTTCTCTCCATCTGTCGAGGATCCCCA CGTTCCACATCGCCACGACTGTTGGACCCTGCATCATCCTGGTTGTACTG ATGACCATCACCTTCATCATGCCCGTAGACAAGGGAGACCGGATCTCGTA TGGAGTGACCATTCAACTCTCCATGGTCGTGTCTCTTGTATTTGTTACGG AGGTTCTTCCTGTCAAGGGGGCTCTACCATTTTTCGCCACGCTGATCATT GTGTGCATGGGCCTGATGGGAATCTTTCTCTTCGTCACCATGGGCGTCAT CTATATCCACGGCAAAGAGGGCCGCCTGTCTCCGATGGCGAGGGCTGTTC TTCTCCGCTACATGGCAAGGGTGCTACTTCTGGGAGATCTCACAAAGGAG AAGCAAGCAAGCAATGGTACCGGCGAAGCTGGCCTGACTGACCACCAAGA CGTAGTGCTGACAAACATCGCCTTCGCCACGAGTTGTGAAGACCCCGAGA TGACCAGAGAGGCATCAGAGCCTCCTAAAGGTCCCGAGTCCACTGGATCC CCAGGGTTTCGTCAGCTGATCGCAAGTATGGATGAGATGACCAAGGCGGT AAAGAGAGGGACGGAGAGGATGACAGAGGGAATGACCGAGTTGAAGAACG AAATGGAGGAGCTGACCAAGGCGGTAAAGAGCGAGGAGGTGGTGTCCGAC TACACCCTGCTGGCTAAGGTCCTGGACAGGCTGTGTCTTGTCCTGTACGT CATCAGTATCGCAGCAGCCATTCCGATGACCATGTATTTGAGCAAGTAAT GTGATGCTGACCCGTTCTTCTTCCCTGCAGACACCATGGATTGCAACGTC TGTTTTGCAGCAACCTCAGCAATCGAGCAAACCCTACAATGCCATCGGAG AAGCTCCACATCAGATGTACATGTAAACAACCATCCTTGTGACTCTTACT CCCTTGCAACACATGAGGGAGAATGGTATCGGAGGGATAAGATCTTTGCA AAAGACGACAGGGAGGCGTGTTTTTCTCTCCATCTGTCGAGGATCCCCAC GTTCCACATCGCCACGACTGTTGGACCCTGCATCATCCTGGTTGTACTGA TGACCATCACCTTCATCATGCCCGTAGACAAGGGAGACCGGATCTCGTAT GGAGTGACCATTCAACTCTCCATGGTCGTGTCTCTTGTATTTGTTACGGA GGTTCTTCCTGTCAAGGGGGCTCTACCATTTTTCGCCACGCTGATCATTG TGTGCATGGGCCTGATGGGAATCTTTCTCTTCGTCACCATGGGCGTCATC TATATCCACGGCAAAGAGGGCCGCCTGTCTCCGATGGCGAGGGCTGTTCT TCTCCGCTACATGGCAAGGGTGCTACTTCTGGGAGATCTCACAAAGGAGA AGCAAGCAAGCAATGGTACCGGCGAAGCTGGCCTGACTGACCACCAAGAC GTAGTGCTGACAAACATCGCCTTCGCCACGAGTTGTGAAGACCCCGAGAT GACCAGAGAGGCATCAGAGCCTCCTAAAGGTCCCGAGTCCACTGGATCCC CAGGGTTTCGTCAGCTGATCGCAAGTATGGATGAGATGACCAAGGCGGTA AAGAGAGGGACGGAGAGGATGACAGAGGGAATGACCGAGTTGAAGAACGA AATGGAGGAGCTGACCAAGGCGGTAAAGAGCGAGGAGGTGGTGTCCGACT ACACCCTGCTGGCTAAGGTCCTGGACAGGCTGTGTCTTGTCCTGTACGTC ATCAGTATCGCAGCAGCCATTCCGATGACCATGTATTTGAGCAAGTAATG TGATGCTGACCCGTTCTTCTTCCCTGCAGACACCATGGATTGCAACGTCT GTTTTGCAGCAACCTCAGCAATCGAGCAAACCCTACAATGCCATCGGAGA AGCTCCACATCAGATGTACATGTAAACAACCATCCTTGTGACTCTTACTC CCTTGCAACACATGAGGGAGAATGGTATCGGAGGGATAAGATCTTTGCAA AAGACGACAGGGAGGCGTGTTTTTCTCTCCATCTGTCGAGGATCCCCACG TTCCACATCGCCACGACTGTTGGACCCTGCATCATCCTGGTTGTACTGAT GACCATCACCTTCATCATGCCCGTAGACAAGGGAGACCGGATCTCGTATG GAGTGACCATTCAACTCTCCATGGTCGTGTCTCTTGTATTTGTTACGGAG GTTCTTCCTGTCAAGGGGGCTCTACCATTTTTCGCCACGCTGATCATTGT GTGCATGGGCCTGATGGGAATCTTTCTCTTCGTCACCATGGGCGTCATCT ATATCCACGGCAAAGAGGGCCGCCTGTCTCCGATGGCGAGGGCTGTTCTT CTCCGCTACATGGCAAGGGTGCTACTTCTGGGAGATCTCACAAAGGAGAA GCAAGCAAGCAATGGTACCGGCGAAGCTGGCCTGACTGACCACCAAGACG TAGTGCTGACAAACATCGCCTTCGCCACGAGTTGTGAAGACCCCGAGATG ACCAGAGAGGCATCAGAGCCTCCTAAAGGTCCCGAGTCCACTGGATCCCC AGGGTTTCGTCAGCTGATCGCAAGTATGGATGAGATGACCAAGGCGGTAA AGAGAGGGACGGAGAGGATGACAGAGGGAATGACCGAGTTGAAGAACGAA ATGGAGGAGCTGACCAAGGCGGTAAAGAGCGAGGAGGTGGTGTCCGACTA CACCCTGCTGGCTAAGGTCCTGGACAGGCTGTGTCTTGTCCTGTACGTCA TCAGTATCGCAGCAGCCATTCCGATGACCATGTATTTGAGCAAGTAATGT GATGCTGACCCGTTCTTCTTCCCTGCAGACACCATGGATTGCAACGTCTG TTTTGCAGCAACCTCAGCAATCGAGCAAACCCTACAATGCCATCGGAGAA GCTCCACATCAGATGTACATGTAAACAACCATCCTTGTGACTCTTACTCC CTTGCAACACATGAGGGAGAATGGTATCGGAGGGATAAGATCTTTGCAAA AGACGACAGGGAGGCGTGTTTTTCTCTCCATCTGTCGAGGATCCCCACGT TCCACATCGCCACGACTGTTGGACCCTGCATCATCCTGGTTGTACTGATG ACCATCACCTTCATCATGCCCGTAGACAAGGGAGACCGGATCTCGTATGG AGTGACCATTCAACTCTCCATGGTCGTGTCTCTTGTATTTGTTACGGAGG TTCTTCCTGTCAAGGGGGCTCTACCATTTTTCGCCACGCTGATCATTGTG TGCATGGGCCTGATGGGAATCTTTCTCTTCGTCACCATGGGCGTCATCTA TATCCACGGCAAAGAGGGCCGCCTGTCTCCGATGGCGAGGGCTGTTCTTC TCCGCTACATGGCAAGGGTGCTACTTCTGGGAGATCTCACAAAGGAGAAG CAAGCAAGCAATGGTACCGGCGAAGCTGGCCTGACTGACCACCAAGACGT AGTGCTGACAAACATCGCCTTCGCCACGAGTTGTGAAGACCCCGAGATGA CCAGAGAGGCATCAGAGCCTCCTAAAGGTCCCGAGTCCACTGGATCCCCA GGGTTTCGTCAGCTGATCGCAAGTATGGATGAGATGACCAAGGCGGTAAA GAGAGGGACGGAGAGGATGACAGAGGGAATGACCGAGTTGAAGAACGAAA TGGAGGAGCTGACCAAGGCGGTAAAGAGCGAGGAGGTGGTGTCCGACTAC ACCCTGCTGGCTAAGGTCCTGGACAGGCTGTGTCTTGTCCTGTACGTCAT CAGTATCGCAGCAGCCATTCCGATGACCATGTATTTGAGCAAGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000040 | genome | Sc0000040:1770507..1773171 - |
Properties
Property Name | Value |
Transcript id | BL97132_cuf0 |
Biotype | protein_coding |
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