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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00003957 ID=TCONS_00003957|Name=TCONS_00003957|organism=Clytia hemisphaerica|type=transcript|length=545bp
agatttttcaagaatttgccacatattttgtcactgattgtagtgtctag
aatagaaaaaaacatttataaaacattattttttcagattaagactaaag
taataattctaatCAAAAAGATGTTTACGAAATTGACAatcttgttttct
ttgatggtgGTTGGCTGCCTGTGCCAAGAAAACACCACCGTATCCTTGAA
CGCCACAACTGCAGCGCCCGCCCCGGTTACCACCACCACTACAACGACCA
CCCTCGCACCGCCATCCGCCAATGAAACACAAAACGCAACAACagcacca
ccaccaccaccaaaaACAGAAATACCCACCACTACAACGACCACGACAAC
CACACAACTACCTGTtacaacaactacaacaacgaccactgaGATGCCAA
CAACAACTACATCCTCTACTAAAGCTACAAAGAAACTAGCATGTGAAAGT
GAGAGATGTCCACCGTACTCGTTATGCGAGAACACAGTCTGTTTAATGAA
ATGTCCAAACATTACAAAGCCTTTCAACGCGTCTGAGCAAGTTTG Run BLAST on NCBI transcript from alignment at sc0000038:712478..714208- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00003957 ID=TCONS_00003957|Name=TCONS_00003957|organism=Clytia hemisphaerica|type=transcript|length=1731bp|location=Sequence derived from alignment at sc0000038:712478..714208- (Clytia hemisphaerica)
AGATTTTTCAAGAATTTGCCACATATTTTGTCACTGATTGTAGTGTCTAG
AATAGAAAAAAACATTTATAAAACATTATTTTTTCAGATTAAGACTAAAG
TAATAATTCTAATCAAAAAGATGTTTACGAAATTGACAATCTTGTTTTCT
TTGATGGTGGTTGGCTGCCTGTGCCAAGAAAACACCACCGGTAAGTGGTT
TAGTCCTTTTTCTAATTGTCTTTACATTCTTGTTCAGAGTCCCATTGGTT
TATGGGAAAAGAATTCTACCCTGCTGTTGATTTTTCGAGGTGTCGAACGT
TCTGGACATTCTATTCGAACTGCCTGAAGATTGTCACCCAAGTGGCATGA
AACTGCCAGTAACAGATTAGAAAAAAGATCTTTTTTTCCTTACTTACTAT
TCTAACTTACTGTAAACCTCTGTGGCATCCCCCTCATAAAAGATGTTAAG
TCACATTCATGAATGTCGTTTTTTAACTTGTAAAGATACTTACTCTTTTG
GAATCCACTTTTTGGAACAAAAATCATAATCCACTTGGCTTCTAAATCAG
TGGAATCAGTCGATGGGGAGGGGTTTGTAATGCAGAACGTAGTATGCAGA
GTCTTTTTAACTCTCACCTCTATAACTCGAATGTCTTGAGCTCGAACAAG
TTCCATGGTTCCTTCAATTAACAATGCCTTTTAAAACCTTAATCCATGAC
TCGAATTTTCCTTAACTCCAACAAATTTGTATTCCCGGTGCACGCTCGTG
TTATGGAGATGCCATTGTAATTGTTTCGGTATAAATTAATTTTGAATCCC
CCCTCACCTCCCTACTATGCTTAAAATCAAAAGTATTCTCTATTTCATTA
ATTTCCAGTATCCTTGAACGCCACAACTGCAGCGCCCGCCCCGGTTACCA
CCACCACTACAACGACCACCCTCGCACCGCCATCCGCCAATGAAACACAA
AACGCAACAACAGCACCACCACCACCACCAAAAACAGAAATACCCACCAC
TACAACGACCACGACAACCACACAACTACCTGTTACAACAACTACAACAA
CGACCACTGAGATGCCAACAACAACTACATCCTCTACTAAAGGTATGTTT
ATATTGTCTTTAAGGGAAATTATTTTGGGGAGTAACGAGAAAAATCAGAG
TTTCTAACTGTTAAACATAAAAATGTTGAATTATTTTAGAAATTGTAAAA
GAAATAGAATTTCTGTGACTTCTTACTTCAAAATTAGTTCCCTTTAAGGT
ATTCAAGTAAACGCTTTCAAGGGTTTGTTGTGGTTGAAAATAAGTTTAGC
ATTTTAGAATTTGGAGCCTTTTGTTATCCTTTTTGTTGATAAATTTCCCG
CCATCTCCAAAATTATTGGACAGTCTGTCAATGATCTTCATTTAAAGGCC
ATTTCACAGTCGAAATGAATCATGAGTAATCAGGACTGGTTGCGCTCTAG
TAACGAATTCCTGTTGGCTAAACGCAAAAATCTTCTAAAATTTTCAAAAC
TTTGGATCAATAGTAAGTCGTCATTAGTGCGCAGTGGTCCTGATTACCCA
TCAAGCTTTGCGACTATGAAATGGCCTATTCTTACCCTTACAATTCTCTT
TTTCGTACAGCTACAAAGAAACTAGCATGTGAAAGTGAGAGATGTCCACC
GTACTCGTTATGCGAGAACACAGTCTGTTTAATGAAATGTCCAAACATTA
CAAAGCCTTTCAACGCGTCTGAGCAAGTTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00003957-exon-sc0000038-1575043694:714019..714208 | TCONS_00003957-exon-sc0000038-1575043694:714019..714208 | Clytia hemisphaerica | exon |
| TCONS_00003957-exon-sc0000038-1575043694:713117..713350 | TCONS_00003957-exon-sc0000038-1575043694:713117..713350 | Clytia hemisphaerica | exon |
| TCONS_00003957-exon-sc0000038-1575043694:712478..712598 | TCONS_00003957-exon-sc0000038-1575043694:712478..712598 | Clytia hemisphaerica | exon |
| TCONS_00003957-exon-sc0000038-1510915933:714019..714208 | TCONS_00003957-exon-sc0000038-1510915933:714019..714208 | Clytia hemisphaerica | exon |
| TCONS_00003957-exon-sc0000038-1510915933:713117..713350 | TCONS_00003957-exon-sc0000038-1510915933:713117..713350 | Clytia hemisphaerica | exon |
| TCONS_00003957-exon-sc0000038-1510915933:712478..712598 | TCONS_00003957-exon-sc0000038-1510915933:712478..712598 | Clytia hemisphaerica | exon |
| TCONS_00003957-exon-sc0000038-1491911889:714019..714208 | TCONS_00003957-exon-sc0000038-1491911889:714019..714208 | Clytia hemisphaerica | exon |
| TCONS_00003957-exon-sc0000038-1491911889:713117..713350 | TCONS_00003957-exon-sc0000038-1491911889:713117..713350 | Clytia hemisphaerica | exon |
| TCONS_00003957-exon-sc0000038-1491911889:712478..712598 | TCONS_00003957-exon-sc0000038-1491911889:712478..712598 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000038 | supercontig | sc0000038:712478..714208 - |
Blast
The following BLAST results are available for this feature:
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