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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96320_cuf4 >transcript:BL96320_cuf4-protein ID=transcript:BL96320_cuf4-protein|Name=transcript:BL96320_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=185bp
EDIILIGGGAILTYRQYNEPVNEREETIEVELRESLWTSSALSASLSRED FMMILQSVEAILIKASYNSFMVTTSIQGIEMDTAVEENTGQSRAVMVEQC SCPAGYTGLSCERCETGYIRQNGGRFLGSCVPVGGSGACNCNGHSTDCDQ LTGECRNCQHNTDGPNCEQCKAGYYGDPLSGFPDA Run BLAST on NCBI mRNA from alignment at Sc0000020:44278..47126+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96320_cuf4 ID=transcript:BL96320_cuf4|Name=transcript:BL96320_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2849bp|location=Sequence derived from alignment at Sc0000020:44278..47126+ (Branchiostoma lanceolatum) AGAAGACATCATCCTTATTGTGAGTATATTATATAATATATACATATAAA
CCATACATTTGCCATATTGCTGCATACAATTTTGAAAGGACTAAGGTCTA
ATGCATGTATATTTTTCACAGAAACTATACCATTGTGTAGAAACATCTTG
TTTGTGATATGATAAGATTTTTTCCGACATAAATGAAAATTGTTTTTGAT
TTGAAACAGGGAGGAGGAGCCATCCTGACCTACAGACAATACAACGAACC
AGTCAATGAGAGGGAAGAAACTATTGAGGTTGAGCTCAGAGAGGTAAGAA
GAAATTTTGACCCACGAGAATTAAGAAAATAAGCCAACTTTTACACATTG
TCATTAACCATCTTGCTGGTAGCCTTTTGGAACCAAATTTTCCATAATTA
CGAGGTAAAGTAGCAGGAAGAAGGTTAATCATGAAAGCATGTAGATAATT
GACAAGTGTTCCTTACATTTGTAGAGCCTATGGACATCGTCGGCCCTGTC
AGCCAGCCTGTCTCGTGAAGACTTCATGATGATCCTACAGAGTGTGGAGG
CCATCCTCATCAAGGCTTCATACAACTCATTCATGGTCACAACAAGGTAC
GGATGCTCGGATTTGTTTGTATTGCATACCCGGTATACTGCTGCATGGTG
TAAAGCCCCTGTCACGCGTGTGTGTATTTACAAGTCCGCATGAGTTGTGT
ATTAGCATGTTTTTGGTTTAGGTCAAGTTTGTAGCCGAATAAGTGACTTC
TTAGGTTCGATCACTAGGCTGCACAACAGTGGGTCAAAGTAGCTAACATC
TTTTTCTCCGCAAACCTTACTTAAACCAAAAAAATGTTGATGCGCAACTC
ATGCGCACTTGAATATACGCACAAGTGTGACAGGGCCCTAACACACCAGG
TTTGTACTGAAGAGTACAAGCTGCATATCTGGACAGATATATTTGATCCA
CACACACTGGGAAGGACCCCTACTCTTTTCAATAAGCATGGTGGGTTCTT
TTACTTGCTCAAGTTGTGGCTCTCCTCAAACGTGGGACCTCCATGTAACG
TCCTATCCGAGGGACGTCCCTAACCAAAGCTGGGTACTCATTTCCACCTG
AGTGAAGTGGGGAAAGTCATGTTAAGTGCCTTTTCCAAGGGCACAACATC
AACAAGACAAATGAGGGGGCCCCTAATTTGAACTTGGGTTCTGGGCCACT
GCGTCAGAGATACGGCATGACTAGTCTGCTCTTCAATTTGCAGGATATCA
ACCTAATTAACCTGGAGTTAGTAGGACAGTCATTTATGCAAAAAGATATA
ACCAAAAAATATACTATTAGATCTTAAAGTAGAAAAATATTTCAAAGTGT
TCATATCAATGTATGAAAATTTCAAGCCATCATGTTACAATTATGAAAGA
AAGCAACTCCTTCATCCATGGTCACAACAAAAAATGGATGCTTAGATTTA
GTACGCTTTCCAGGATATCAACCTAGCTACATTTTGTATAGAGCTGAATT
ATAAAGTACATTGATTTTGACTCAGAGTTAGTGGGAGAGTCATTCATGAA
AAAAATGTAACCGAAAATACCAAAATAGTTATACCTTGAAGTTCATGAAA
AAAATGTAACCAAAAAATATCAAAATAGTAAAATTTGTCAAAGTGTTCCT
ATCTTTATGTGCAAATTTCAAGGCATTATGTTACAATTATCAAAAGAATG
ATGATCAAAAGAAAGCACCTTAACATGTATATTATATATTATGCATCTCT
GCAGCATCCAGGGAATTGAGATGGACACAGCTGTGGAAGAGAACACGGGA
CAGTCACGTGCTGTCATGGTGGAACAGTGCAGCTGTCCTGCTGGGTACAC
TGGGCTGTCCTGCGAGGTGAGAGGGTTTTATTTTATTTTATTAGAAGTTA
TAAAAAACTTGAGTGCAGTGCCACATTGTCCTTGTCTCACAGTAAAAGAA
AAGAATATTATGCACAAAGTGTGATTCTATTGAAATTATCTGTTGGTATG
TGAACTTGAAAAGTTTGTACAAATGTAAACCCACGTTTTCAGCTGTCCTT
ATAATACAATGTATCTTCTTGTGCCCCCCAGCGTTGCGAGACTGGCTACA
TCCGACAGAACGGCGGGCGTTTCCTGGGCTCCTGCGTGCCTGTGGGCGGG
TCTGGTGCCTGTAACTGTAACGGACACTCAACTGACTGTGACCAACTTAC
AGGAGAATGCAGGGTATGTTTTACAACTACTTCTTTTCACATAATTTAGA
CATTTTGTAATACTGTAATACACTTTATCTTCACAGTAGCAAAATTTCAC
AGTGTAAAGAAAATGGACATTTTCACTGAACTTTAACTTCATGGTGGCGG
CAAGTGATTTACAGAACGGATGTGTGAAGGAATCATAAATAATAACTATA
GGTTTTTCACGGTGATGATAAGATCACGGTACAGAGGTAACTGTGAACAG
TGAACATAAATTTACAGGGAAAGAACAAGAATTACAGTACTGGTCAACAC
TATACAAAAGCTAGGCTAAGGCATGCTAAAGGTTTAGGCATTGCCGTATT
AGCATTTATTCTACAATTATTTTAACTTCGTTTTCTGCTGTCATTATGCA
ACCTTAAAGATGTTTTATTAGACATTACTACAAGAAAACATTTTCTACAT
GTATAAATGTACATTTGATTGAAGTATTACACATCGACTCGACTGGTAAT
CATTCTATTGTCTTGGATATTGTTTTACTATCTGATTGATTTATGATGTC
TCTGTCCTACAGAATTGTCAGCACAACACAGACGGACCCAACTGCGAACA
GTGCAAGGCTGGTTACTATGGCGACCCGCTAAGCGGCTTCCCCGATGCC Coding sequence (CDS) from alignment at Sc0000020:44278..47126+ >transcript:BL96320_cuf4 ID=transcript:BL96320_cuf4|Name=transcript:BL96320_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=3330bp|location=Sequence derived from alignment at Sc0000020:44278..47126+ (Branchiostoma lanceolatum) GAAGACATCATCCTTATTGGAGGAGGAGCCATCCTGACCTACAGACAATA CAACGAACCAGTCAATGAGAGGGAAGAAACTATTGAGGTTGAGCTCAGAG AGAGCCTATGGACATCGTCGGCCCTGTCAGCCAGCCTGTCTCGTGAAGAC TTCATGATGATCCTACAGAGTGTGGAGGCCATCCTCATCAAGGCTTCATA CAACTCATTCATGGTCACAACAAGCATCCAGGGAATTGAGATGGACACAG CTGTGGAAGAGAACACGGGACAGTCACGTGCTGTCATGGTGGAACAGTGC AGCTGTCCTGCTGGGTACACTGGGCTGTCCTGCGAGCGTTGCGAGACTGG CTACATCCGACAGAACGGCGGGCGTTTCCTGGGCTCCTGCGTGCCTGTGG GCGGGTCTGGTGCCTGTAACTGTAACGGACACTCAACTGACTGTGACCAA CTTACAGGAGAATGCAGGAATTGTCAGCACAACACAGACGGACCCAACTG CGAACAGTGCAAGGCTGGTTACTATGGCGACCCGCTAAGCGGCTTCCCCG ATGCCGAAGACATCATCCTTATTGGAGGAGGAGCCATCCTGACCTACAGA CAATACAACGAACCAGTCAATGAGAGGGAAGAAACTATTGAGGTTGAGCT CAGAGAGAGCCTATGGACATCGTCGGCCCTGTCAGCCAGCCTGTCTCGTG AAGACTTCATGATGATCCTACAGAGTGTGGAGGCCATCCTCATCAAGGCT TCATACAACTCATTCATGGTCACAACAAGCATCCAGGGAATTGAGATGGA CACAGCTGTGGAAGAGAACACGGGACAGTCACGTGCTGTCATGGTGGAAC AGTGCAGCTGTCCTGCTGGGTACACTGGGCTGTCCTGCGAGCGTTGCGAG ACTGGCTACATCCGACAGAACGGCGGGCGTTTCCTGGGCTCCTGCGTGCC TGTGGGCGGGTCTGGTGCCTGTAACTGTAACGGACACTCAACTGACTGTG ACCAACTTACAGGAGAATGCAGGAATTGTCAGCACAACACAGACGGACCC AACTGCGAACAGTGCAAGGCTGGTTACTATGGCGACCCGCTAAGCGGCTT CCCCGATGCCGAAGACATCATCCTTATTGGAGGAGGAGCCATCCTGACCT ACAGACAATACAACGAACCAGTCAATGAGAGGGAAGAAACTATTGAGGTT GAGCTCAGAGAGAGCCTATGGACATCGTCGGCCCTGTCAGCCAGCCTGTC TCGTGAAGACTTCATGATGATCCTACAGAGTGTGGAGGCCATCCTCATCA AGGCTTCATACAACTCATTCATGGTCACAACAAGCATCCAGGGAATTGAG ATGGACACAGCTGTGGAAGAGAACACGGGACAGTCACGTGCTGTCATGGT GGAACAGTGCAGCTGTCCTGCTGGGTACACTGGGCTGTCCTGCGAGCGTT GCGAGACTGGCTACATCCGACAGAACGGCGGGCGTTTCCTGGGCTCCTGC GTGCCTGTGGGCGGGTCTGGTGCCTGTAACTGTAACGGACACTCAACTGA CTGTGACCAACTTACAGGAGAATGCAGGAATTGTCAGCACAACACAGACG GACCCAACTGCGAACAGTGCAAGGCTGGTTACTATGGCGACCCGCTAAGC GGCTTCCCCGATGCCGAAGACATCATCCTTATTGGAGGAGGAGCCATCCT GACCTACAGACAATACAACGAACCAGTCAATGAGAGGGAAGAAACTATTG AGGTTGAGCTCAGAGAGAGCCTATGGACATCGTCGGCCCTGTCAGCCAGC CTGTCTCGTGAAGACTTCATGATGATCCTACAGAGTGTGGAGGCCATCCT CATCAAGGCTTCATACAACTCATTCATGGTCACAACAAGCATCCAGGGAA TTGAGATGGACACAGCTGTGGAAGAGAACACGGGACAGTCACGTGCTGTC ATGGTGGAACAGTGCAGCTGTCCTGCTGGGTACACTGGGCTGTCCTGCGA GCGTTGCGAGACTGGCTACATCCGACAGAACGGCGGGCGTTTCCTGGGCT CCTGCGTGCCTGTGGGCGGGTCTGGTGCCTGTAACTGTAACGGACACTCA ACTGACTGTGACCAACTTACAGGAGAATGCAGGAATTGTCAGCACAACAC AGACGGACCCAACTGCGAACAGTGCAAGGCTGGTTACTATGGCGACCCGC TAAGCGGCTTCCCCGATGCCGAAGACATCATCCTTATTGGAGGAGGAGCC ATCCTGACCTACAGACAATACAACGAACCAGTCAATGAGAGGGAAGAAAC TATTGAGGTTGAGCTCAGAGAGAGCCTATGGACATCGTCGGCCCTGTCAG CCAGCCTGTCTCGTGAAGACTTCATGATGATCCTACAGAGTGTGGAGGCC ATCCTCATCAAGGCTTCATACAACTCATTCATGGTCACAACAAGCATCCA GGGAATTGAGATGGACACAGCTGTGGAAGAGAACACGGGACAGTCACGTG CTGTCATGGTGGAACAGTGCAGCTGTCCTGCTGGGTACACTGGGCTGTCC TGCGAGCGTTGCGAGACTGGCTACATCCGACAGAACGGCGGGCGTTTCCT GGGCTCCTGCGTGCCTGTGGGCGGGTCTGGTGCCTGTAACTGTAACGGAC ACTCAACTGACTGTGACCAACTTACAGGAGAATGCAGGAATTGTCAGCAC AACACAGACGGACCCAACTGCGAACAGTGCAAGGCTGGTTACTATGGCGA CCCGCTAAGCGGCTTCCCCGATGCCGAAGACATCATCCTTATTGGAGGAG GAGCCATCCTGACCTACAGACAATACAACGAACCAGTCAATGAGAGGGAA GAAACTATTGAGGTTGAGCTCAGAGAGAGCCTATGGACATCGTCGGCCCT GTCAGCCAGCCTGTCTCGTGAAGACTTCATGATGATCCTACAGAGTGTGG AGGCCATCCTCATCAAGGCTTCATACAACTCATTCATGGTCACAACAAGC ATCCAGGGAATTGAGATGGACACAGCTGTGGAAGAGAACACGGGACAGTC ACGTGCTGTCATGGTGGAACAGTGCAGCTGTCCTGCTGGGTACACTGGGC TGTCCTGCGAGCGTTGCGAGACTGGCTACATCCGACAGAACGGCGGGCGT TTCCTGGGCTCCTGCGTGCCTGTGGGCGGGTCTGGTGCCTGTAACTGTAA CGGACACTCAACTGACTGTGACCAACTTACAGGAGAATGCAGGAATTGTC AGCACAACACAGACGGACCCAACTGCGAACAGTGCAAGGCTGGTTACTAT GGCGACCCGCTAAGCGGCTTCCCCGATGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000020 | genome | Sc0000020:44278..47126 + |
Properties
Property Name | Value |
Transcript id | BL96320_cuf4 |
Biotype | protein_coding |
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