|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95278_evm1 >transcript:BL95278_evm1-protein ID=transcript:BL95278_evm1-protein|Name=transcript:BL95278_evm1|organism=Branchiostoma lanceolatum|type=polypeptide|length=166bp
MSRGLSLVVILGLVGAISAQSYKGCYYRQWGVFTFKKSGDDMTNQKCAEL
CKKDSFPYSGTYYYGKKCSCGKEAEFGGRYPLKTAEESKCSSACAGDPNQ
KCGQGNGFMSVWNTGYVEPETGKREMAEKLEEVNGRLRELIAKREMAEEM
EEMEEQLRELEAKLSR Run BLAST on NCBI mRNA from alignment at Sc0000017:282263..284663+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95278_evm1 ID=transcript:BL95278_evm1|Name=transcript:BL95278_evm1|organism=Branchiostoma lanceolatum|type=mRNA|length=2401bp|location=Sequence derived from alignment at Sc0000017:282263..284663+ (Branchiostoma lanceolatum)
ATGTCGCGCGGCTTGTCCCTTGTTGTTATTCTCGGACTCGTCGGTAAGTA
CGTCTTGTACGAAAATGAGGGCTGTGTTGTCTCTGTAGATGTGTGCAAAA
TATGGTCAGTCAACGTTGCCGGCAGTAGTCGTGTCGTGAAGTCTATTCGA
GACCCTCAGGTCGAGTCGAGCAAAGTTAGAGACAAGGGCCAAAATAAGCT
AGATACTTTGCAGGGGTTCTTGGTGAGGTAAATCTTAGGAGCGTCTTTGA
TATACAGTCAAACCTGTCCTCAACAACTACTCATGGGACCGAAGAAAAAA
TATACTGAGGACAGGTGGTTGCTCACGGCAGGGCAGGTTTAACTATGTAA
AGATGGACGGGGGTGGTTTAATGCGGTTGGCTGCGCCAGGCGGTTGCTCA
ACCAGGTTTGGCTGTACCCGGTATGGAGGCAAAGCTTCACATGGAACCTA
GGCTGTTTCCAGGGCCTACACAGGCCAGCTCCTCGGCTATAGGGCCAACA
TGCCCCCGAGGAAACTTTCACCCAGTCACCCGAGGAAGACCCTTAGCTTC
TTGGGCTGTAATCATCTGAAGCAGACAAAAAGCAGTTGGGTGGGTTCCGT
TGGGAAGGCTGTGTACAAGTTTACAGGTGCATTGGACAAGTAACAGCCAA
CAGCTTTTGTGAGGCAAGGGGTTTTAATAGAGACTGTTAATGGAGACCTC
CTTGGGTAGAGACTGGTGACCAGGTGTTGCAAAATTGGGCGGAAGCCTCA
GGGAGTTTTCCGACTCGCAGACAGCAAGTGGCTGCATACCCTGGTCACCA
GTCACTACCGGGACGTCAGGTCCTCGGCCCACCCTGAGAAATACAGCCGC
ATGGACAATCAGCCCGCTCCGGTGATTTCGTCGGCCTGAGGAAGATGCGT
CCGGAATCGGGACTGTTACTTTCTACCAGACTCCTAGGATGGAACACTGT
AGAGTGAAGTCAAAACCTACAATTATGAATGCATAGAAACTTATGGTAGA
GTAGTCACTTTCTATCTTCTGTTCATTTGCAATCAGCCTCCGGGCTTGTA
AAATATACATTGAGAATTCGCCAGAGAGGTCACACGTGAGTAGCCCCGCT
TAATTCCCAGTCTTTTCTCTGTAGTCTAAGGAGTCCGGAAGGAGAATGGA
CGAACAGCATCTGTGAAGCCCAGGGAAACACACTGTTGTTACAAGAACTA
AACGATTGACTGATGTGTCCATGTCACAGGAGCGATCTCGGCGCAGAGCT
ACAAAGGCTGCTACTATAGGCAATGGGGAGTTTTCACCTTTAAGAAGTCC
GGAGATGACATGACCAACCAGAAATGTGCGGAGCTCTGCAAGAAGGATTC
CTTCCCGTATTCAGGTAGGATTTTAGTCAGTACCACCCAAATTACCATTC
ACGTTACATACATTGTAATGGAAAAACAACAAGTAAAAATATTCCTTTTT
TTATCGATGAAATTCGTTCAGCGCGGTGTCAGATCGCTCGGTCGCCAACG
CGTCACGGGTCCAGTGAGAGGGCAGCTCAATAGCAACCTACGAGACTAAT
AATACATGTTAATGTACCTTGGAAGCAGCCATGTCAGACAGACTGATGTG
GGCCCCGGTTGTACAAGGGCTCGCCCCGTCCTCTGCTGCTGAGGTCGACG
GATGATGATGATGAATGTACCTTCTCTTGTTCCCCAATAGGAACCTACTA
CTACGGGAAGAAGTGCAGCTGCGGGAAGGAGGCGGAATTTGGGGGGAGGT
ATCCCCTGAAGACGGCCGAAGAGTCCAAGTGCTCCTCCGCCTGCGCGGGT
GACCCCAATCAGAAGTGTGGACAGGGCAACGGGTTCATGAGCGTCTGGAA
CACTGGCTATGGTGAGGCAAATTAAAAATGCAGTTTAAAGCTTAAGTTGA
CTTTTAACTGATTTGTGCCAGCCGTTTACCATTAGTATGTCATAATGACT
TTTACATTGTGTCACCATAATGCTATAATATGACCATGCGACGCGGATGA
AAAATGCATGACTCTCCATTTGTTATTACGTAGAGACAGAGAGACAGACA
CCAATACAAACAGACAGGCAGACAGACAGACGGACAGACAGACCGGACAA
TGATTCTTACTTGAAATAACTGACCCACCCTTTCGTTCCGAATGATTGAT
CGCCATATTGGATCCAAAATGGCCGGGACGGTTAGCATTACATAGCTGTG
ACGTCACACACAAACACTTACGAATCTCACTACCATCCTTTTTGTACAGT
GGAGCCCGAGACAGGAAAGCGCGAGATGGCCGAGAAGCTGGAGGAGGTCA
ACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGGCGGAGGAGATG
GAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAGTTATCTCGTTA
A Coding sequence (CDS) from alignment at Sc0000017:282263..284663+ >transcript:BL95278_evm1 ID=transcript:BL95278_evm1|Name=transcript:BL95278_evm1|organism=Branchiostoma lanceolatum|type=CDS|length=2004bp|location=Sequence derived from alignment at Sc0000017:282263..284663+ (Branchiostoma lanceolatum)
ATGTCGCGCGGCTTGTCCCTTGTTGTTATTCTCGGACTCGTCGGAGCGAT
CTCGGCGCAGAGCTACAAAGGCTGCTACTATAGGCAATGGGGAGTTTTCA
CCTTTAAGAAGTCCGGAGATGACATGACCAACCAGAAATGTGCGGAGCTC
TGCAAGAAGGATTCCTTCCCGTATTCAGGAACCTACTACTACGGGAAGAA
GTGCAGCTGCGGGAAGGAGGCGGAATTTGGGGGGAGGTATCCCCTGAAGA
CGGCCGAAGAGTCCAAGTGCTCCTCCGCCTGCGCGGGTGACCCCAATCAG
AAGTGTGGACAGGGCAACGGGTTCATGAGCGTCTGGAACACTGGCTATGT
GGAGCCCGAGACAGGAAAGCGCGAGATGGCCGAGAAGCTGGAGGAGGTCA
ACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGGCGGAGGAGATG
GAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAGTTATCTCGTTA
AATGTCGCGCGGCTTGTCCCTTGTTGTTATTCTCGGACTCGTCGGAGCGA
TCTCGGCGCAGAGCTACAAAGGCTGCTACTATAGGCAATGGGGAGTTTTC
ACCTTTAAGAAGTCCGGAGATGACATGACCAACCAGAAATGTGCGGAGCT
CTGCAAGAAGGATTCCTTCCCGTATTCAGGAACCTACTACTACGGGAAGA
AGTGCAGCTGCGGGAAGGAGGCGGAATTTGGGGGGAGGTATCCCCTGAAG
ACGGCCGAAGAGTCCAAGTGCTCCTCCGCCTGCGCGGGTGACCCCAATCA
GAAGTGTGGACAGGGCAACGGGTTCATGAGCGTCTGGAACACTGGCTATG
TGGAGCCCGAGACAGGAAAGCGCGAGATGGCCGAGAAGCTGGAGGAGGTC
AACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGGCGGAGGAGAT
GGAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAGTTATCTCGTT
AAATGTCGCGCGGCTTGTCCCTTGTTGTTATTCTCGGACTCGTCGGAGCG
ATCTCGGCGCAGAGCTACAAAGGCTGCTACTATAGGCAATGGGGAGTTTT
CACCTTTAAGAAGTCCGGAGATGACATGACCAACCAGAAATGTGCGGAGC
TCTGCAAGAAGGATTCCTTCCCGTATTCAGGAACCTACTACTACGGGAAG
AAGTGCAGCTGCGGGAAGGAGGCGGAATTTGGGGGGAGGTATCCCCTGAA
GACGGCCGAAGAGTCCAAGTGCTCCTCCGCCTGCGCGGGTGACCCCAATC
AGAAGTGTGGACAGGGCAACGGGTTCATGAGCGTCTGGAACACTGGCTAT
GTGGAGCCCGAGACAGGAAAGCGCGAGATGGCCGAGAAGCTGGAGGAGGT
CAACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGGCGGAGGAGA
TGGAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAGTTATCTCGT
TAAATGTCGCGCGGCTTGTCCCTTGTTGTTATTCTCGGACTCGTCGGAGC
GATCTCGGCGCAGAGCTACAAAGGCTGCTACTATAGGCAATGGGGAGTTT
TCACCTTTAAGAAGTCCGGAGATGACATGACCAACCAGAAATGTGCGGAG
CTCTGCAAGAAGGATTCCTTCCCGTATTCAGGAACCTACTACTACGGGAA
GAAGTGCAGCTGCGGGAAGGAGGCGGAATTTGGGGGGAGGTATCCCCTGA
AGACGGCCGAAGAGTCCAAGTGCTCCTCCGCCTGCGCGGGTGACCCCAAT
CAGAAGTGTGGACAGGGCAACGGGTTCATGAGCGTCTGGAACACTGGCTA
TGTGGAGCCCGAGACAGGAAAGCGCGAGATGGCCGAGAAGCTGGAGGAGG
TCAACGGTCGCCTGAGGGAGCTCATCGCCAAGCGCGAGATGGCGGAGGAG
ATGGAGGAGATGGAGGAGCAGCTGAGGGAGCTGGAGGCCAAGTTATCTCG
TTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000017 | genome | Sc0000017:282263..284663 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95278_evm1 |
| Biotype | protein_coding |
|
