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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97374_cuf8 >transcript:BL97374_cuf8-protein ID=transcript:BL97374_cuf8-protein|Name=transcript:BL97374_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=171bp
MISGLLGNCEGMLSDSQLMTKLKNSHYDVVLTYPGTSCGSIVAQYLDLPL
VCTLRSTPLGLDTRANGVPTPLAYVPTVSSRLSDRMTFFQRVKNVLASVG
LNAIGRLVFERTYDGMARRTIGGNYTMSAALARTDVWLYQSDVMFDFPRP
TMPNMVSIAGHMADKVKPLSE Run BLAST on NCBI mRNA from alignment at Sc0000030:1184599..1186702+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97374_cuf8 ID=transcript:BL97374_cuf8|Name=transcript:BL97374_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=2104bp|location=Sequence derived from alignment at Sc0000030:1184599..1186702+ (Branchiostoma lanceolatum)
AAGGCTGTAATAAGCCGTTCCCGCTAGGGCTGACCTATGTTGGACGGCCG
CTATAAGCGCGATTCAATCAGGCTGATACCTTTCCATCCTTAATGGCATA
AATGAAAAATAAAGGCATTGACTTGCCTTGACTTGACTTGACTTCAGTTG
ACTTGACTAATTTTAGGCCAAGTATACTCCCAACGTTACCCAATTCAACT
TACCAGATTTTTGTGCAAAAATTGCCACAGGCATTCTCTTCAGATGGGGT
ACTAAGCTACATTCCATTGCTTGTTAAAATGATCTCTGGCCTCTTGGGTA
ACTGTGAGGGAATGTTGAGTGACAGTCAGCTGATGACGAAACTGAAGAAC
AGTCACTATGACGTAGTTCTGACGTACCCTGGGACGTCATGTGGGTCCAT
CGTGGCTCAGTACTTGGACCTACCTCTGGTCTGCACACTGAGGTCTACGC
CTTTGGGACTAGGTGTGTCTTCTTTAAATCCTTTGTCGGCTATCAATATT
ACGCCGATTGATTTTCTACTTCGTTCATAACGTTGACTTTATATTTGTTC
AATGACCCAACGTCTCAGCTTAGATCATGGAATATACAGGTAAATGTATC
ATTACGGTAGATATATGATTACAGTCATACAATATGGTTCTTTGTGATGT
GTTGCAGACACCCGCGCCAATGGTGTCCCCACCCCTCTTGCCTACGTACC
AACAGTGTCCTCAAGGCTGTCTGATCGAATGACCTTTTTCCAGAGAGTCA
AGAATGTTTTAGCTTCTGTTGGGTTGAATGCTATAGGACGTCTAGTCTTC
GAGAGAACTTACGACGGTATGGCAAGGAGGTACGTGGATGAATAATTGCT
CGTCTTGTTTTATACATGAAGGAGATGTCTCGTCTCTGTAGTCAGTGTAA
AACAAAGGTTGACATGACTTTTTGTGCACAAACAGAACCATTGGGGGCAA
CTACACCATGTCGGCTGCCTTGGCAAGAACCGACGTGTGGCTCTACCAAT
CAGACGTCATGTTCGACTTCCCTAGACCCACCATGCCAAATATGGTCAGC
ATAGCGGGTCACATGGCTGATAAGGTCAAGCCACTCAGTGAGGTTAGTCA
ATGATTGAAATTAGAAGCAACATAACATTAACGTCGACCAGCTTTGTGAC
CTTTTTCGCTGAAATCATATTTGATTGTGTTCTAATTGAAACAATAAACT
TTATTGTCTTATTCTGTCAGAAATGACCTTCAAGGATGGTCCTAACTCTT
GTATTCTACTGAATTAATAGGAGCTGGAAAAGTTCATGCAGAGCTCTGGA
GATGCCGGGGTCGTGATTGTAACGTTCGGCTCCATGGTAGCGACTATGCC
TGCAGAGAGAGCCGACATGCTGGCCGCTGCTTTTGCCCGTCTGCCGCAGA
AGGTCGTGTGGCGCTACGCTGGGACGCCACCTCCAAGTCTGGGGTCCAAC
ACCAAGACCATGAAGTGGTTACCTCAAAGCGACTTACTAGGTAAATGTCT
GTAGAGTCCATTATATTGCCATGTCAGAGTTTGTTTATGCAGTTATAGTC
TAGTGGATGATGAAAGCATTTTGTATAAAACCACATTGATCCAATGTTGT
CACACATTCAAGCTTTAATTTTTATNTGATTACAGTCATACAATATGGTT
CTTTGTGATGTGTTGCAGACACCCGCGCCAATGGTGTCCCCACCCCTCTT
GCCTACGTACCAACAGTGTCCTCAAGGCTGTCTGATCGAATGACCTTTTT
CCAGAGAGTCAAGAATGTTTTAGCTTCTGTTGGGTTGAATGCTATAGGAC
GTCTAGTCTTCGAGAGAACTTACGACGGTATGGCAAGGAGGTACGTGGAT
GAATAATTGCTCGTCTTGTTTTATACATGAAGGAGATGTCTCGTCTCTGT
AGTCAGTGTAAAACAAAGGTTGACATGACTTTTTGTGCACAAACAGAACC
ATTGGGGGCAACTACACCATGTCGGCTGCCTTGGCAAGAACCGACGTGTG
GCTCTACCAATCAGACGTCATGTTCGACTTCCCTAGACCCACCATGCCAA
ATATGGTCAGCATAGCGGGTCACATGGCTGATAAGGTCAAGCCACTCAGT
GAGG Coding sequence (CDS) from alignment at Sc0000030:1184599..1186702+ >transcript:BL97374_cuf8 ID=transcript:BL97374_cuf8|Name=transcript:BL97374_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=1539bp|location=Sequence derived from alignment at Sc0000030:1184599..1186702+ (Branchiostoma lanceolatum)
ATGATCTCTGGCCTCTTGGGTAACTGTGAGGGAATGTTGAGTGACAGTCA
GCTGATGACGAAACTGAAGAACAGTCACTATGACGTAGTTCTGACGTACC
CTGGGACGTCATGTGGGTCCATCGTGGCTCAGTACTTGGACCTACCTCTG
GTCTGCACACTGAGGTCTACGCCTTTGGGACTAGACACCCGCGCCAATGG
TGTCCCCACCCCTCTTGCCTACGTACCAACAGTGTCCTCAAGGCTGTCTG
ATCGAATGACCTTTTTCCAGAGAGTCAAGAATGTTTTAGCTTCTGTTGGG
TTGAATGCTATAGGACGTCTAGTCTTCGAGAGAACTTACGACGGTATGGC
AAGGAGAACCATTGGGGGCAACTACACCATGTCGGCTGCCTTGGCAAGAA
CCGACGTGTGGCTCTACCAATCAGACGTCATGTTCGACTTCCCTAGACCC
ACCATGCCAAATATGGTCAGCATAGCGGGTCACATGGCTGATAAGGTCAA
GCCACTCAGTGAGATGATCTCTGGCCTCTTGGGTAACTGTGAGGGAATGT
TGAGTGACAGTCAGCTGATGACGAAACTGAAGAACAGTCACTATGACGTA
GTTCTGACGTACCCTGGGACGTCATGTGGGTCCATCGTGGCTCAGTACTT
GGACCTACCTCTGGTCTGCACACTGAGGTCTACGCCTTTGGGACTAGACA
CCCGCGCCAATGGTGTCCCCACCCCTCTTGCCTACGTACCAACAGTGTCC
TCAAGGCTGTCTGATCGAATGACCTTTTTCCAGAGAGTCAAGAATGTTTT
AGCTTCTGTTGGGTTGAATGCTATAGGACGTCTAGTCTTCGAGAGAACTT
ACGACGGTATGGCAAGGAGAACCATTGGGGGCAACTACACCATGTCGGCT
GCCTTGGCAAGAACCGACGTGTGGCTCTACCAATCAGACGTCATGTTCGA
CTTCCCTAGACCCACCATGCCAAATATGGTCAGCATAGCGGGTCACATGG
CTGATAAGGTCAAGCCACTCAGTGAGATGATCTCTGGCCTCTTGGGTAAC
TGTGAGGGAATGTTGAGTGACAGTCAGCTGATGACGAAACTGAAGAACAG
TCACTATGACGTAGTTCTGACGTACCCTGGGACGTCATGTGGGTCCATCG
TGGCTCAGTACTTGGACCTACCTCTGGTCTGCACACTGAGGTCTACGCCT
TTGGGACTAGACACCCGCGCCAATGGTGTCCCCACCCCTCTTGCCTACGT
ACCAACAGTGTCCTCAAGGCTGTCTGATCGAATGACCTTTTTCCAGAGAG
TCAAGAATGTTTTAGCTTCTGTTGGGTTGAATGCTATAGGACGTCTAGTC
TTCGAGAGAACTTACGACGGTATGGCAAGGAGAACCATTGGGGGCAACTA
CACCATGTCGGCTGCCTTGGCAAGAACCGACGTGTGGCTCTACCAATCAG
ACGTCATGTTCGACTTCCCTAGACCCACCATGCCAAATATGGTCAGCATA
GCGGGTCACATGGCTGATAAGGTCAAGCCACTCAGTGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000030 | genome | Sc0000030:1184599..1186702 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97374_cuf8 |
| Biotype | protein_coding |
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