TCONS_00003989 (transcript) - C. hemisphaerica

Overview
NameTCONS_00003989
Unique NameTCONS_00003989
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length143

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00003989 ID=TCONS_00003989|Name=TCONS_00003989|organism=Clytia hemisphaerica|type=transcript|length=143bp
aaacaatcaaagaattatattttttataagacatGATACAACAATACCTC
TCTCTCTAAACGTCAAAATACcttaaattacaaaattttagaTCTAATAA
AATAAATTCTACTTCAAGCGGAAAGGGGAAAATAATTCTGGAA
Run BLAST on NCBI

transcript from alignment at sc0000038:417142..417284

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00003989 ID=TCONS_00003989|Name=TCONS_00003989|organism=Clytia hemisphaerica|type=transcript|length=143bp|location=Sequence derived from alignment at sc0000038:417142..417284 (Clytia hemisphaerica)
TTCCAGAATTATTTTCCCCTTTCCGCTTGAAGTAGAATTTATTTTATTAG
AtctaaaattttgtaatttaagGTATTTTGACGTTTAGAGAGAGAGGTAT
TGTTGTATCatgtcttataaaaaatataattctttgattgttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_002238XLOC_002238Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00003989-exon-sc0000038-1491911889:417142..417284TCONS_00003989-exon-sc0000038-1491911889:417142..417284Clytia hemisphaericaexon
TCONS_00003989-exon-sc0000038-1510915933:417142..417284TCONS_00003989-exon-sc0000038-1510915933:417142..417284Clytia hemisphaericaexon
TCONS_00003989-exon-sc0000038-1575043694:417142..417284TCONS_00003989-exon-sc0000038-1575043694:417142..417284Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000038supercontigsc0000038:417142..417284 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00003989 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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