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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96393_cuf72 >transcript:BL96393_cuf72-protein ID=transcript:BL96393_cuf72-protein|Name=transcript:BL96393_cuf72|organism=Branchiostoma lanceolatum|type=polypeptide|length=132bp
ASRADAGEYTITAENNSGSVTSTVKVLVMGKPGPPMGLQVLETTPDNCTV
SWQPPEDDGGAGVTNYVIEKMDLKTKNWKKVSGAVRKTTFKIPKLIPFNE
YQFRVSAQNMFGVGDPATTGNVLARHPFDTPG Run BLAST on NCBI mRNA from alignment at Sc0000008:5582381..5584152+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96393_cuf72 ID=transcript:BL96393_cuf72|Name=transcript:BL96393_cuf72|organism=Branchiostoma lanceolatum|type=mRNA|length=1772bp|location=Sequence derived from alignment at Sc0000008:5582381..5584152+ (Branchiostoma lanceolatum)
CGCTTCCCGCGCAGACGCAGGCGAGTACACCATCACCGCAGAGAACAACA
GCGGCTCCGTCACTTCCACCGTTAAGGTAACCTTTGTCTTCTTTCTCACT
CAAAACGTCTTGCATTTCAGTAAGCTTTTATGTCATAGTTGAATATCGAA
AATTCGACCAAAAATTCTGCAAAAGAATTTAGCAACAGGTGAAGATATAA
AGTGGGAAACCAACAACTTATGATATTTCTCTGAGTGTTCCAAAGCGCTA
CAGACTTTCCCCTCGGCCTCAGTTTTCATTCCAGCATACTTTTTTTCTTA
ATCTAAGAATCAACACATACAATCGGTGTGGCCTTACGAAAAGAAGATTG
ATGAAAAAGAAACCTAAACATCCCAAATTGATAATAATGATACTTTCCAG
TAAGCTTTCAAGTCTTTACTTCATTATTGAGAATTCGGTGTGTACAACCA
AAATCAAAGTTTTAATAAAGGTGGATGAGCAGTATCCCTAACCATCCCAC
CTGCCCCCCTCCCCCGTGCAGGTGCTGGTGATGGGCAAGCCCGGACCCCC
CATGGGGCTGCAGGTGCTGGAGACCACGCCCGACAACTGCACCGTCTCCT
GGCAACCGCCGGAGGACGACGGAGGCGCGGGCGTCACCAACTACGTCATC
GAGAAGATGGACCTCAAGACCAAGAACTGGAAGAAGGTGCAAATATGTAC
TTTGTTTCATTGCTGGTCGGTTATGGTTTCTGGTAACTAAAAAAAGGGAC
TTGATCTTTAATATATCGGACTTTTAAAGATATATTTCCAGTACAAAGTA
CAGAGTACAAAGAACAGTCCTTCATTTCCAACTTTCATGCATACATATCA
ACTACATTTTGTAGCTACTGTAGGTTTTTGATCGCATAACCAAAATGCAT
CATTTGTATGTTGATTATGTCTTAAACAGTCCAGCCTCTTTAGAATACTT
CTTTTGATTCCAAAAGGCTACATAAGCAGGGGAAAAGTTATACCAGAGTC
GAAACTGTTACAATGTACTTCCCCCTTTCATGACACTTTTTTTTTCAGTT
TTTTTTTTTGTACTTGGACATCTCTCTCATCTTGATCTTGTTATGTTTCT
TCCCCAAGGTTTCTGGAGCTGTGAGGAAGACAACCTTCAAGATCCCGAAG
CTGATTCCGTTCAACGAGTACCAGTTCCGCGTCAGCGCGCAGAACATGTT
CGGAGTGGGCGATCCCGCCACAACCGGGAACGTGCTCGCTCGACATCCGT
TCGGTACGTTGAGAATAACTCTTATTTTTACTATCTTTCTTGAAACAACA
GAGTGAAATGAAATGAAAGTGGTTGTCAAAAGGGCGAGAATGAAACTTGG
AGAGTACTTTTTGATGAAATCTACACTCAGGTCAGGTATTTCTTGAATTA
TGAAGAAATTGAAACATAAATTCGTTTTTATGCAATATTTAAGGCCTGGA
ACAATCAAAGCACTGTAAAAAGACACTTGACTTGATGAATGCACAAATAA
ACATAATTTGGTAGACTTGGAATGCAATCTAAGCATGTAACAAATTTCCA
ACAGTCAACAGTCTTAGAGCCAGCAGTCGAAGCGCTGTAAAAGGAGATGA
TTGTTTACTTCTTCTTCTTGTATCACCGCTTCAATCTGCTACACTTACAC
GCTCCAATACTCAGCACATCTTCCTTGGTGCAAGGCTCAGGCAGGAGAGG
ACAGATTGTTTACTTACAACAGGATGTGATACTAAACTGTTTGATTTCAT
TTCCCCACAGACACCCCCGGAC Coding sequence (CDS) from alignment at Sc0000008:5582381..5584152+ >transcript:BL96393_cuf72 ID=transcript:BL96393_cuf72|Name=transcript:BL96393_cuf72|organism=Branchiostoma lanceolatum|type=CDS|length=1584bp|location=Sequence derived from alignment at Sc0000008:5582381..5584152+ (Branchiostoma lanceolatum)
GCTTCCCGCGCAGACGCAGGCGAGTACACCATCACCGCAGAGAACAACAG
CGGCTCCGTCACTTCCACCGTTAAGGTGCTGGTGATGGGCAAGCCCGGAC
CCCCCATGGGGCTGCAGGTGCTGGAGACCACGCCCGACAACTGCACCGTC
TCCTGGCAACCGCCGGAGGACGACGGAGGCGCGGGCGTCACCAACTACGT
CATCGAGAAGATGGACCTCAAGACCAAGAACTGGAAGAAGGTTTCTGGAG
CTGTGAGGAAGACAACCTTCAAGATCCCGAAGCTGATTCCGTTCAACGAG
TACCAGTTCCGCGTCAGCGCGCAGAACATGTTCGGAGTGGGCGATCCCGC
CACAACCGGGAACGTGCTCGCTCGACATCCGTTCGACACCCCCGGAGCTT
CCCGCGCAGACGCAGGCGAGTACACCATCACCGCAGAGAACAACAGCGGC
TCCGTCACTTCCACCGTTAAGGTGCTGGTGATGGGCAAGCCCGGACCCCC
CATGGGGCTGCAGGTGCTGGAGACCACGCCCGACAACTGCACCGTCTCCT
GGCAACCGCCGGAGGACGACGGAGGCGCGGGCGTCACCAACTACGTCATC
GAGAAGATGGACCTCAAGACCAAGAACTGGAAGAAGGTTTCTGGAGCTGT
GAGGAAGACAACCTTCAAGATCCCGAAGCTGATTCCGTTCAACGAGTACC
AGTTCCGCGTCAGCGCGCAGAACATGTTCGGAGTGGGCGATCCCGCCACA
ACCGGGAACGTGCTCGCTCGACATCCGTTCGACACCCCCGGAGCTTCCCG
CGCAGACGCAGGCGAGTACACCATCACCGCAGAGAACAACAGCGGCTCCG
TCACTTCCACCGTTAAGGTGCTGGTGATGGGCAAGCCCGGACCCCCCATG
GGGCTGCAGGTGCTGGAGACCACGCCCGACAACTGCACCGTCTCCTGGCA
ACCGCCGGAGGACGACGGAGGCGCGGGCGTCACCAACTACGTCATCGAGA
AGATGGACCTCAAGACCAAGAACTGGAAGAAGGTTTCTGGAGCTGTGAGG
AAGACAACCTTCAAGATCCCGAAGCTGATTCCGTTCAACGAGTACCAGTT
CCGCGTCAGCGCGCAGAACATGTTCGGAGTGGGCGATCCCGCCACAACCG
GGAACGTGCTCGCTCGACATCCGTTCGACACCCCCGGAGCTTCCCGCGCA
GACGCAGGCGAGTACACCATCACCGCAGAGAACAACAGCGGCTCCGTCAC
TTCCACCGTTAAGGTGCTGGTGATGGGCAAGCCCGGACCCCCCATGGGGC
TGCAGGTGCTGGAGACCACGCCCGACAACTGCACCGTCTCCTGGCAACCG
CCGGAGGACGACGGAGGCGCGGGCGTCACCAACTACGTCATCGAGAAGAT
GGACCTCAAGACCAAGAACTGGAAGAAGGTTTCTGGAGCTGTGAGGAAGA
CAACCTTCAAGATCCCGAAGCTGATTCCGTTCAACGAGTACCAGTTCCGC
GTCAGCGCGCAGAACATGTTCGGAGTGGGCGATCCCGCCACAACCGGGAA
CGTGCTCGCTCGACATCCGTTCGACACCCCCGGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000008 | genome | Sc0000008:5582381..5584152 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96393_cuf72 |
| Biotype | protein_coding |
|
