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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96848_cuf4 >transcript:BL96848_cuf4-protein ID=transcript:BL96848_cuf4-protein|Name=transcript:BL96848_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=145bp
IELELPFSLTSFIIGLESSLIALPINVLIVVLFRYAGTRQTSPKPANASK
PKGKESYGVPRKGHHGAELVLPRYLPKVEEAESEFDAEYTADPSVYIEKL
KKEGALKKVDTRYVVNKEGSKVTVSHKPYRPFPWWCRIVAWLLVA Run BLAST on NCBI mRNA from alignment at Sc0000007:6714580..6716071+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96848_cuf4 ID=transcript:BL96848_cuf4|Name=transcript:BL96848_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=1492bp|location=Sequence derived from alignment at Sc0000007:6714580..6716071+ (Branchiostoma lanceolatum)
CATCGAGTTGGAACTGCCCTTCAGCTTGACTTCCGTAAGTTTATTTCATA
AACTTTTAAGATTTATTGCATTTTCACACAATGGCAACATAAATGGAAAA
ATAAGATAAATGAACATACCAGGTCGTACACCGTAGATTCAAATGATACA
TAGATATGTCTAAAAGGAAAATTAAACGGAGTACTACGTTACTGTACCAT
GATAATGCAATGGTTTTGTACAACATTGATTAACACTAATAAAGCCTAAC
GATATTAATAAAAGGAAGAAAAAATAGTATTGACCAATCATCTAACAGGC
CAAGAACTGCTTTGAGTGGTTTGCCCTAAAGTGACTTTTGACTCTTTCTT
CTATGTTTCTGATTTCCTACCTTAAAATATTGCAATTGATGTATATACTC
CATCTAACTCTTGACGTACGTTTCAGTTCATCATCGGCCTTGAGAGCTCC
CTGATAGCTCTTCCGATAAACGTTCTCATTGTGGTGCTTTTTCGGTACGC
CGGGACAAGGCAGACATCACCAAAGCCAGCAAACGCGTCCAAACCGAAGG
GAAAGGAAAGTTACGGCGTCCCCCGTAAGGGCCACCACGGCGCGGAGCTT
GTTCTACCGCGCTACCTACCGAAGGTTGAGGAAGCCGAGTCTGAGTTTGA
CGCGGAGTACACGGCCGACCCGTCCGTCTATATCGAGAAGTTAAAGAAAG
AAGGAGGTGAGCGATAAGAATTAATCAGAGCTTTATTTGTCGACAATCTT
ACTTGGTACAGCGGCTATTTAACAACCAATACTACAATGCCAATCCATCC
GGCGTATGTGTTACATTATCTTCATGTATGGAGAATTCGGTTTCGTTTTA
TTTTTAAATGAACTGCAAATAAATTGACCTATGTAGGCTGATCTAATAGT
TGGACATAATGATAGTACACAGAAAGCATCCGTCTGTGAACCAGACAGAG
TGAATTTTGTCTTAGTGGTGACAATCTCTATCAGTGTTCCTCTCTCTCTT
TGCGTGTACATGTTCTCGAGGTTGACATCCTTTAGACACCTCATGGTGGC
TGTTTCGCTCTGATAGACTGGAAATGTTAGATGTACTAACATATCTGACT
GACAATGAAGCGAACTGTGGTATCATAACTTTTTGATTTTTGTATTTTTC
AGCTCTGAAGAAAGTTGATACTAGATACGTCGTCAACAAAGAAGGGTCGA
AGGTTACCGTGAGCCATAAGCCGTACCGGCCGTTTCCTTGGTGGTGCCGC
ATAGTAGGTGAGATGGTCTCGTCAACTGTACATCAGCTAGTTGTAGATTT
TTGCTTGCCATATTCTGCAGACACAGTAGATACATCAATAGTAGTAATAG
TAATATCTAATAATTTCCCTTCGGAATGTCTAGCTGACACCGTTCATAAG
GGCCATCAATATAATTAGAATTGCGTGGCCTCAGGCTGATCATGTCTACA
GTAACGGAACCGTTTCCCCTACAGCCTGGCTCCTGGTTGCTG Coding sequence (CDS) from alignment at Sc0000007:6714580..6716071+ >transcript:BL96848_cuf4 ID=transcript:BL96848_cuf4|Name=transcript:BL96848_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=1740bp|location=Sequence derived from alignment at Sc0000007:6714580..6716071+ (Branchiostoma lanceolatum)
ATCGAGTTGGAACTGCCCTTCAGCTTGACTTCCTTCATCATCGGCCTTGA
GAGCTCCCTGATAGCTCTTCCGATAAACGTTCTCATTGTGGTGCTTTTTC
GGTACGCCGGGACAAGGCAGACATCACCAAAGCCAGCAAACGCGTCCAAA
CCGAAGGGAAAGGAAAGTTACGGCGTCCCCCGTAAGGGCCACCACGGCGC
GGAGCTTGTTCTACCGCGCTACCTACCGAAGGTTGAGGAAGCCGAGTCTG
AGTTTGACGCGGAGTACACGGCCGACCCGTCCGTCTATATCGAGAAGTTA
AAGAAAGAAGGAGCTCTGAAGAAAGTTGATACTAGATACGTCGTCAACAA
AGAAGGGTCGAAGGTTACCGTGAGCCATAAGCCGTACCGGCCGTTTCCTT
GGTGGTGCCGCATAGTAGCCTGGCTCCTGGTTGCTATCGAGTTGGAACTG
CCCTTCAGCTTGACTTCCTTCATCATCGGCCTTGAGAGCTCCCTGATAGC
TCTTCCGATAAACGTTCTCATTGTGGTGCTTTTTCGGTACGCCGGGACAA
GGCAGACATCACCAAAGCCAGCAAACGCGTCCAAACCGAAGGGAAAGGAA
AGTTACGGCGTCCCCCGTAAGGGCCACCACGGCGCGGAGCTTGTTCTACC
GCGCTACCTACCGAAGGTTGAGGAAGCCGAGTCTGAGTTTGACGCGGAGT
ACACGGCCGACCCGTCCGTCTATATCGAGAAGTTAAAGAAAGAAGGAGCT
CTGAAGAAAGTTGATACTAGATACGTCGTCAACAAAGAAGGGTCGAAGGT
TACCGTGAGCCATAAGCCGTACCGGCCGTTTCCTTGGTGGTGCCGCATAG
TAGCCTGGCTCCTGGTTGCTATCGAGTTGGAACTGCCCTTCAGCTTGACT
TCCTTCATCATCGGCCTTGAGAGCTCCCTGATAGCTCTTCCGATAAACGT
TCTCATTGTGGTGCTTTTTCGGTACGCCGGGACAAGGCAGACATCACCAA
AGCCAGCAAACGCGTCCAAACCGAAGGGAAAGGAAAGTTACGGCGTCCCC
CGTAAGGGCCACCACGGCGCGGAGCTTGTTCTACCGCGCTACCTACCGAA
GGTTGAGGAAGCCGAGTCTGAGTTTGACGCGGAGTACACGGCCGACCCGT
CCGTCTATATCGAGAAGTTAAAGAAAGAAGGAGCTCTGAAGAAAGTTGAT
ACTAGATACGTCGTCAACAAAGAAGGGTCGAAGGTTACCGTGAGCCATAA
GCCGTACCGGCCGTTTCCTTGGTGGTGCCGCATAGTAGCCTGGCTCCTGG
TTGCTATCGAGTTGGAACTGCCCTTCAGCTTGACTTCCTTCATCATCGGC
CTTGAGAGCTCCCTGATAGCTCTTCCGATAAACGTTCTCATTGTGGTGCT
TTTTCGGTACGCCGGGACAAGGCAGACATCACCAAAGCCAGCAAACGCGT
CCAAACCGAAGGGAAAGGAAAGTTACGGCGTCCCCCGTAAGGGCCACCAC
GGCGCGGAGCTTGTTCTACCGCGCTACCTACCGAAGGTTGAGGAAGCCGA
GTCTGAGTTTGACGCGGAGTACACGGCCGACCCGTCCGTCTATATCGAGA
AGTTAAAGAAAGAAGGAGCTCTGAAGAAAGTTGATACTAGATACGTCGTC
AACAAAGAAGGGTCGAAGGTTACCGTGAGCCATAAGCCGTACCGGCCGTT
TCCTTGGTGGTGCCGCATAGTAGCCTGGCTCCTGGTTGCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000007 | genome | Sc0000007:6714580..6716071 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96848_cuf4 |
| Biotype | protein_coding |
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