|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96944_cuf15 >transcript:BL96944_cuf15-protein ID=transcript:BL96944_cuf15-protein|Name=transcript:BL96944_cuf15|organism=Branchiostoma lanceolatum|type=polypeptide|length=122bp
GSIQCVAGIPSCDVGDQWSLQDGILGCHPLTTPCDMKADVVFVVESSSSV PQAEFDKVRSFLKHVVEKVTIGADATQIAVVSYGSYPALQFYLNEHDNLF ELKTGINNLRHIGLGTATGTAL Run BLAST on NCBI mRNA from alignment at Sc0000044:1012676..1014529+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96944_cuf15 ID=transcript:BL96944_cuf15|Name=transcript:BL96944_cuf15|organism=Branchiostoma lanceolatum|type=mRNA|length=1854bp|location=Sequence derived from alignment at Sc0000044:1012676..1014529+ (Branchiostoma lanceolatum) GAGGATCCATCCAGTGCGTGGCCGGGATTCCGTCATGTGATGTCGGCGAC
CAGTGGTCTCTACAGGACGGCATTCTGGGATGTCATCCACGTTAGTATAG
GCGAAAGTCATGACTACTTTAAAAAAAAAAATCAACATTCAGAGGACATA
CTGTAACCTGTATCTTTGTTACATCTTCTTACTCTTTCGTCCTCCCTTAA
GGTCTCAATGAAAATCGGCCTTCAGACAGATTTGAGTTTCTTGTTGATAA
ACAAAGTTTTAAAAAAAATCAATGAACGGGTTTCTTCAAAAACTGAAATT
CAAATATTGTACAACTCACTGTGACCCGATATAAGCGGACCTAGATGTCA
CAATTACATAGCATGATCTGTTATTTTCCCCAAATGAACACACCCTGTGA
CATGAAGGTGGATGATGTTTTTGGGAATTCTTCCTTTGTGAGAATAGCTA
GTCGGTCGTGCCTACCCATTTCTGTACTGTCTATTTATTTTCAAAAGTCA
CGGTACACTACATTGACTCTCGGTGCAGCATAGCTGATGTTTGAGAGTGA
ACGGTTAGGGACAGACAAATACATACATATACTGTTAACGGTACCTTTGA
TGATAACGTGACATCATTGGCGTTATTTCTCCCCAGTGACCCCCCTTTGT
GACATGGAAGCGGACGTGGTGTTTGAAGTGAAAAGTTCCTCCCGTGTGAG
AATAACTAACTTGCCATTGATGTATATGCATGTCTGTAAGTAGCGTTACC
AGTTCTGATAATGTTCATCCCTCCCCAGTGACTACCCCGTGTGACATGAA
GGCTGACGTGGTGTTTGTTGTGGAAAGTTCCTCCAGTGTTCCACAGGCGG
AGTTTGACAAGGTTCGCTCCTTCCTCAAACATGTGGTGGAGAAGGTCACC
ATCGGAGCAGACGCTACTCAGTAAGGTTTTATTTAAAGTAGTTTTTAAAG
AAGACATTTATGTTAATTGTGCTAATTATCGTCGCAGTCTTTTTGTACTG
GAGGACCAGCTGCATATATTGTTAACCTGCACTAATGCCTTGAGTGAAGC
TGAATGTCTGGTAAAAGTAGTCGCTTTCTGAAGCTTGATGCTAAAATTTC
CTAGCAAAAAGATCAACATGTGTCTATACTCATTGCGATTGACAGCATTT
TTTTGTATAGTTTGTGGTGGCTTGTCAAGATTGTCATTAAAAATCTTTCA
AAGTACAATAGCTGTATTTTTTAAGCAAGTCGTCCATATTTAGCTTGATC
GCGATCGGTACTATCAAAATCTTTCAAAAAGGCCGACACATGTATGTGCT
TCATTAATTAAATAGACGGAGAGAAAATTTGATTTTTCAGATGTTGAATA
TCTCAACGTTGTGAAAAAAGAACAAACCATAACAAAACTACCATCTTTAC
GTTCAGGATCGCCGTGGTAAGCTACGGCAGCTACCCGGCCCTGCAGTTCT
ACCTGAACGAGCACGACAATCTGTTCGAACTGAAGACCGGCATCAACAAC
CTGCGCCACATCGGACTCGGCACGGCCACAGGCACCGCGCTAGGCTTCGT
CGCGGACGGCGTCTTTAGCGAGGCCCACGGCGCACGCCCAGGTGTGCCTA
AGGTAAGGTCTTCTGCTTATTCAACTGTACTAACCTTAACCCTAGCATCA
ACACCCTGCGGCACATCGGGCTGGGCACGGCTACCGGCACCGCGCTCGGC
TTCGTCGCGGACGGCGTCCTTAGTGAGGCCCACGGCGCACGCCCGGGTGT
TCCCAAGGTAAGGTCTTCTGCTTATTCAACTGTACTAACCATAACCCTAG
CATCAAAAACCTGCGGCACATCGGGCTGGGCACGGCCACCGGCACCGCGC
TAGG Coding sequence (CDS) from alignment at Sc0000044:1012676..1014529+ >transcript:BL96944_cuf15 ID=transcript:BL96944_cuf15|Name=transcript:BL96944_cuf15|organism=Branchiostoma lanceolatum|type=CDS|length=1464bp|location=Sequence derived from alignment at Sc0000044:1012676..1014529+ (Branchiostoma lanceolatum) GGATCCATCCAGTGCGTGGCCGGGATTCCGTCATGTGATGTCGGCGACCA GTGGTCTCTACAGGACGGCATTCTGGGATGTCATCCACTGACTACCCCGT GTGACATGAAGGCTGACGTGGTGTTTGTTGTGGAAAGTTCCTCCAGTGTT CCACAGGCGGAGTTTGACAAGGTTCGCTCCTTCCTCAAACATGTGGTGGA GAAGGTCACCATCGGAGCAGACGCTACTCAGATCGCCGTGGTAAGCTACG GCAGCTACCCGGCCCTGCAGTTCTACCTGAACGAGCACGACAATCTGTTC GAACTGAAGACCGGCATCAACAACCTGCGCCACATCGGGCTGGGCACGGC CACCGGCACCGCGCTAGGATCCATCCAGTGCGTGGCCGGGATTCCGTCAT GTGATGTCGGCGACCAGTGGTCTCTACAGGACGGCATTCTGGGATGTCAT CCACTGACTACCCCGTGTGACATGAAGGCTGACGTGGTGTTTGTTGTGGA AAGTTCCTCCAGTGTTCCACAGGCGGAGTTTGACAAGGTTCGCTCCTTCC TCAAACATGTGGTGGAGAAGGTCACCATCGGAGCAGACGCTACTCAGATC GCCGTGGTAAGCTACGGCAGCTACCCGGCCCTGCAGTTCTACCTGAACGA GCACGACAATCTGTTCGAACTGAAGACCGGCATCAACAACCTGCGCCACA TCGGGCTGGGCACGGCCACCGGCACCGCGCTAGGATCCATCCAGTGCGTG GCCGGGATTCCGTCATGTGATGTCGGCGACCAGTGGTCTCTACAGGACGG CATTCTGGGATGTCATCCACTGACTACCCCGTGTGACATGAAGGCTGACG TGGTGTTTGTTGTGGAAAGTTCCTCCAGTGTTCCACAGGCGGAGTTTGAC AAGGTTCGCTCCTTCCTCAAACATGTGGTGGAGAAGGTCACCATCGGAGC AGACGCTACTCAGATCGCCGTGGTAAGCTACGGCAGCTACCCGGCCCTGC AGTTCTACCTGAACGAGCACGACAATCTGTTCGAACTGAAGACCGGCATC AACAACCTGCGCCACATCGGGCTGGGCACGGCCACCGGCACCGCGCTAGG ATCCATCCAGTGCGTGGCCGGGATTCCGTCATGTGATGTCGGCGACCAGT GGTCTCTACAGGACGGCATTCTGGGATGTCATCCACTGACTACCCCGTGT GACATGAAGGCTGACGTGGTGTTTGTTGTGGAAAGTTCCTCCAGTGTTCC ACAGGCGGAGTTTGACAAGGTTCGCTCCTTCCTCAAACATGTGGTGGAGA AGGTCACCATCGGAGCAGACGCTACTCAGATCGCCGTGGTAAGCTACGGC AGCTACCCGGCCCTGCAGTTCTACCTGAACGAGCACGACAATCTGTTCGA ACTGAAGACCGGCATCAACAACCTGCGCCACATCGGGCTGGGCACGGCCA CCGGCACCGCGCTA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000044 | genome | Sc0000044:1012676..1014529 + |
Properties
Property Name | Value |
Transcript id | BL96944_cuf15 |
Biotype | protein_coding |
|