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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97467_cuf8 >transcript:BL97467_cuf8-protein ID=transcript:BL97467_cuf8-protein|Name=transcript:BL97467_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=258bp
LTSTNQPTKPTMTPFLLLFVALATASPMKRQTPPLDADGDGHLTIIEVDN
AMDLDVVLVALDTDMDQQFTVQQALQFLDHHYINVLDTNHDHMLSFQEIQ
AGLTLADLFAFYDSNGDGFLYGTEADRLYAMYDAAYGPAPVRVSRQAVDG
LDTNNDAHLTLSECEAGLNLSVVAVVLDTDGDMMFTVDEALQFIDHHYFN
VLDTNHDHMLSFQELRDGVTWADLFSFYDRNDDGFLYGAEADKVYFMYNE
VQNAAIPN Run BLAST on NCBI mRNA from alignment at Sc0000011:1829877..1833734- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97467_cuf8 ID=transcript:BL97467_cuf8|Name=transcript:BL97467_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=3858bp|location=Sequence derived from alignment at Sc0000011:1829877..1833734- (Branchiostoma lanceolatum)
CCTGACTTCAACCAACCAACCAACCAAACCAACCATGACTCCCTTCCTCC
TCCTCTTTGTTGCCCTGGCAACGGCTTCTCCAATGAAGAGGTATGTACTG
AACGCCCTTCAGATTTTAGAACCATCTACATCTGTAGAAATCTAGAATTT
GCAATAATCGTTAGCAAAGCTTAGAATTGTCGTACTTGTTGTGCGATTTA
TCTTCAACGTATATCGTATGTATCTTGCCGCTGTCTTTATTGATATCAAA
TATATCTTGCTGTTTAGCAACTGTACACTTTGTATTTAGAACCACGATTG
ATATCCAAATTCCATTATTTACTTTATTTATTTACTTATTTTGTTACTAT
TCTGCTTTCTTTAAATTAAGTCATTAGTTTGTTACACTACTTTTCTATGT
AACTTTTATTATTATTGTACTTAAGTTTGTAAATGTGCCTTTGTATTATA
TTTTGTTATTTCAGTTATTTTTTGTTTATGTATGCACGCAGGGCGCTTTG
AAAATCGCCGTAGTGGCGACAAGTTTGTCCCTGGATAAATAAATAAATGA
AATGAAATATGGAACTAAACTGAAATAATCTCAGTTGGTCAGCTGTGCTG
GTGGGTAGAATGTTCTCTTTGCATTCGGCAGAACGCGGATTCAGTACTAT
TTTTCAATATGGGTCCGGCGACACGTTGACATTCAAGTTGAAATATTTTA
CCCTCCCTTTATTAACACAACGACTTACATTGTTCTGTCTCGACCGACTA
TGACCTGATTAAGCAGAATCATGCAAAAAGTTAGAAATTTTCTGTATGTT
CTGAACGCAGACAGACCCCTCCACTGGACGCTGATGGCGACGGACATCTC
ACCATTATTGAAGTGGACAACGCTATGGACCTGGATGTGGTCCTGGTGGC
CTTGGACACCGACAGTACGTACCGATGCTATATCTCATGTCGCCTTTTCA
CACGAGTTTACACTTTTTCAGACAGGAGGCGTACGTCACATCCTTCGACC
ATGTTGTCACATCCGCCGGCCATGTGACGTCATATCCGTCCGTCATGTGT
AAAAGTGTAAATCCTTTCACAAACTCAAGCAGACGTTAAAAATCAATCGC
TTCTCTCTCTCTGTGGGAAAGTTTATCGAATAGAAAATTCGTTTAAAATA
TACCAAATTTACTTTGCAATCATCAATCATCCAAAATAGCGGACGGTACT
TGACAATACGCCATAGTAACGTGAGTTCAAACCTCCTCGTTTCGAAACGC
TTCTTCTTTCTTCAGAAAATAATTTCACCAGGTTGGTAGAGAATACGATA
TTGAAGCATTTTTTACACCTGCTGATATTTCGGTGTCTCTCAGACACCTT
CCTCGGAGCTTCTAACTGCAGAGCTGCTTCTCGCTGCTGCTTACAAACGT
AACCAGAGGAGAGACACATCTGGTTGTCTATAAAAAGAGAACTCAAATAT
CCTCTTCTTCTTCTGTAGTGGACCAGCAGTTCACCGTTCAACAGGCTCTG
CAGTTCCTTGACCACCACTACATCAACGTCCTCGACACCAACCACGACCA
CATGCTGAGCTTCCAGGAAATCCAGGCAGGCCTCACCTTGGCCGACCTGT
TTGCCTTTTACGATAGCAACGGTACGTTCGGACGTTAACTTTACCTATAC
AAGCCCTGCAATAGATGAAGTCAAATTCATAAATACGAAATGTGATGTTA
CGTGTCTAGAGAGAAATTGTGAAGTACGAAAATCATTTTGAGAACTGCAC
ATCTCCCTTAGCCTGATTTCATCTCAGGATGTAGACGTCGCAAAGGTGTT
TTTTTCACTTCACACTTGTTTCGTTCTATGATATCAATGGTACGTTCCGA
CATAAACATGCGACATACCTTTCACCCTATCTCGGCAATAGATGAATACA
AGTGCACAAAAACTGACTACGTCACAGTGAAGACGTACGTCATTTCTGTG
AACATTCAAATGGGTTCTAACATCACATTTTCATTCTAATGCTTCGAACG
TACTGGTATGTTTAACAAGCTCGATGGTGCTAAAATGTTGACGAAAATGA
CGTGCATCCCACTACGTAATTACCATTTGTCTTTTATAGTTATTGGGTGG
GCCAACTACTCTCTCGTCGCAGCTAGGGGAGCCTTTTTTGAGTATTAAGC
GACTTATTAACTTTAATTATCTCCGTTCCTGAAGTTATCGTGAGACGCAC
ACGTCGCCAAGGTTAATTTTTTAACATTAACTTGTTTACCCTTTTTTAAA
TCCCTTCAGGTGACGGATTCCTGTATGGTACGGAGGCGGATCGCCTCTAC
GCCATGTACGACGCGGCGTACGGGCCCGCGCCGGTGCGCGTAAGCAGGCA
GGCTGTCGACGGTCTTGACACCAACAACGACGCGCATCTCACCCTGAGCG
AGTGTGAGGCCGGACTGAACCTGTCCGTAGTCGCCGTCGTTCTGGACACC
GACGGTACGTACAAAACTCTACATCTCCTCCAGTCCTCTCTGTCCTCCAG
TGCTCTTGGAAGATCTTATGGTGTGCATCCTGCATCCTCACACAGCTGCT
GTATGCAGGACGTGTGAGGTCTGCCTACACTTTGTCCATGTTTCGGTGCC
CACAGGAGGACGTCCCTGACGATCTCCCTCTTACTCCTCCAGGAATGACC
AGCAAAACGTAGCCTCCTCTCACGGATGACTTGAGATATGGGGGGTAAAT
CCCCATATAGCAGGTCCTTTGCGGGATGCTCCTTCCAGGACATGTTTAGG
GCAGCACGTAGCAGCTTTGTGTAGCTGCCATCTGGTTTTCTCTCAAGTCA
TCTCAAGTTGAAATTTTAAAAGAGTTTACACGTTTATGAAGGTTAGACAT
CCTGGTATCCAATATATAAAGACAGTTCAACTGGATGAAATTCAGATAAA
GAGTTTACGCAAATGTGTTGCCCGCCATGTGACGTCACATCCGTTCATTA
TGTTACGTCACATCCGTTCATTATGTGACGTCACATGCAAAAGCTTGTTG
GTAAGAGCTTTACTTTACGCACAGATAAAGCGAGTTAACAATAGAACCTT
CTTTTCTGTGTAGGTGACATGATGTTCACCGTTGACGAGGCGCTGCAGTT
CATCGACCATCACTACTTCAACGTCCTCGACACCAACCACGACCACATGC
TCAGCTTCCAGGAACTTAGAGACGGTGTGACCTGGGCTGACCTGTTTTCC
TTCTACGACAGAAACGGTACGTTCTGACGTCACTATACCTACAACATCCA
GACATGAGACGTGTCTAAAACCCTCAAAACTGATTACGTCACTGTAAGAA
CGTACGCCATTTTCGTTGACATGCGTTCTAAAATGTTTTTCTCGACCAGC
ACCGCATTCGAACGCGCGTCGAACATGTACATGTAATAGCATGTTCGAAC
GCGTTCGACTGTTGACAGAAATGACGTATACATTTTTTTTGCACATCTTT
AATCTATGTATAGAGTATGCCAATGAAATACAAGCTTTCTTCATCAATTC
CGAATTCATGACAATTTTTTAAACTTTCTAAAGAACTTTTCCATTGTTTC
CCCTTGTATCCATGGAGCCTGGTTGGACACACATCGCCATGGCATTTTTT
TTAAGCCACTCTTGTTATCTTCTAATGCATCAGATGACGGCTTCCTGTAC
GGTGCAGAGGCGGACAAGGTCTACTTCATGTACAACGAGGTACAAAACGC
CGCCATCCCGAACTGAGTGGGGGAATGTCGGCTGTTCTAATTACTAGCAA
CAAATCAGCACTAAATGACAACTTGCAGACCTACAAACTACCCGAGTCCC
TCCTCACGACCTAGTCGTTGGTGAGGACAAGGTAAACCGTGACTTGGTCA
GACTTGCG Coding sequence (CDS) from alignment at Sc0000011:1829877..1833734- >transcript:BL97467_cuf8 ID=transcript:BL97467_cuf8|Name=transcript:BL97467_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=4662bp|location=Sequence derived from alignment at Sc0000011:1829877..1833734- (Branchiostoma lanceolatum)
CTGACTTCAACCAACCAACCAACCAAACCAACCATGACTCCCTTCCTCCT
CCTCTTTGTTGCCCTGGCAACGGCTTCTCCAATGAAGAGACAGACCCCTC
CACTGGACGCTGATGGCGACGGACATCTCACCATTATTGAAGTGGACAAC
GCTATGGACCTGGATGTGGTCCTGGTGGCCTTGGACACCGACATGGACCA
GCAGTTCACCGTTCAACAGGCTCTGCAGTTCCTTGACCACCACTACATCA
ACGTCCTCGACACCAACCACGACCACATGCTGAGCTTCCAGGAAATCCAG
GCAGGCCTCACCTTGGCCGACCTGTTTGCCTTTTACGATAGCAACGGTGA
CGGATTCCTGTATGGTACGGAGGCGGATCGCCTCTACGCCATGTACGACG
CGGCGTACGGGCCCGCGCCGGTGCGCGTAAGCAGGCAGGCTGTCGACGGT
CTTGACACCAACAACGACGCGCATCTCACCCTGAGCGAGTGTGAGGCCGG
ACTGAACCTGTCCGTAGTCGCCGTCGTTCTGGACACCGACGGTGACATGA
TGTTCACCGTTGACGAGGCGCTGCAGTTCATCGACCATCACTACTTCAAC
GTCCTCGACACCAACCACGACCACATGCTCAGCTTCCAGGAACTTAGAGA
CGGTGTGACCTGGGCTGACCTGTTTTCCTTCTACGACAGAAACGATGACG
GCTTCCTGTACGGTGCAGAGGCGGACAAGGTCTACTTCATGTACAACGAG
GTACAAAACGCCGCCATCCCGAACTGACTGACTTCAACCAACCAACCAAC
CAAACCAACCATGACTCCCTTCCTCCTCCTCTTTGTTGCCCTGGCAACGG
CTTCTCCAATGAAGAGACAGACCCCTCCACTGGACGCTGATGGCGACGGA
CATCTCACCATTATTGAAGTGGACAACGCTATGGACCTGGATGTGGTCCT
GGTGGCCTTGGACACCGACATGGACCAGCAGTTCACCGTTCAACAGGCTC
TGCAGTTCCTTGACCACCACTACATCAACGTCCTCGACACCAACCACGAC
CACATGCTGAGCTTCCAGGAAATCCAGGCAGGCCTCACCTTGGCCGACCT
GTTTGCCTTTTACGATAGCAACGGTGACGGATTCCTGTATGGTACGGAGG
CGGATCGCCTCTACGCCATGTACGACGCGGCGTACGGGCCCGCGCCGGTG
CGCGTAAGCAGGCAGGCTGTCGACGGTCTTGACACCAACAACGACGCGCA
TCTCACCCTGAGCGAGTGTGAGGCCGGACTGAACCTGTCCGTAGTCGCCG
TCGTTCTGGACACCGACGGTGACATGATGTTCACCGTTGACGAGGCGCTG
CAGTTCATCGACCATCACTACTTCAACGTCCTCGACACCAACCACGACCA
CATGCTCAGCTTCCAGGAACTTAGAGACGGTGTGACCTGGGCTGACCTGT
TTTCCTTCTACGACAGAAACGATGACGGCTTCCTGTACGGTGCAGAGGCG
GACAAGGTCTACTTCATGTACAACGAGGTACAAAACGCCGCCATCCCGAA
CTGACTGACTTCAACCAACCAACCAACCAAACCAACCATGACTCCCTTCC
TCCTCCTCTTTGTTGCCCTGGCAACGGCTTCTCCAATGAAGAGACAGACC
CCTCCACTGGACGCTGATGGCGACGGACATCTCACCATTATTGAAGTGGA
CAACGCTATGGACCTGGATGTGGTCCTGGTGGCCTTGGACACCGACATGG
ACCAGCAGTTCACCGTTCAACAGGCTCTGCAGTTCCTTGACCACCACTAC
ATCAACGTCCTCGACACCAACCACGACCACATGCTGAGCTTCCAGGAAAT
CCAGGCAGGCCTCACCTTGGCCGACCTGTTTGCCTTTTACGATAGCAACG
GTGACGGATTCCTGTATGGTACGGAGGCGGATCGCCTCTACGCCATGTAC
GACGCGGCGTACGGGCCCGCGCCGGTGCGCGTAAGCAGGCAGGCTGTCGA
CGGTCTTGACACCAACAACGACGCGCATCTCACCCTGAGCGAGTGTGAGG
CCGGACTGAACCTGTCCGTAGTCGCCGTCGTTCTGGACACCGACGGTGAC
ATGATGTTCACCGTTGACGAGGCGCTGCAGTTCATCGACCATCACTACTT
CAACGTCCTCGACACCAACCACGACCACATGCTCAGCTTCCAGGAACTTA
GAGACGGTGTGACCTGGGCTGACCTGTTTTCCTTCTACGACAGAAACGAT
GACGGCTTCCTGTACGGTGCAGAGGCGGACAAGGTCTACTTCATGTACAA
CGAGGTACAAAACGCCGCCATCCCGAACTGACTGACTTCAACCAACCAAC
CAACCAAACCAACCATGACTCCCTTCCTCCTCCTCTTTGTTGCCCTGGCA
ACGGCTTCTCCAATGAAGAGACAGACCCCTCCACTGGACGCTGATGGCGA
CGGACATCTCACCATTATTGAAGTGGACAACGCTATGGACCTGGATGTGG
TCCTGGTGGCCTTGGACACCGACATGGACCAGCAGTTCACCGTTCAACAG
GCTCTGCAGTTCCTTGACCACCACTACATCAACGTCCTCGACACCAACCA
CGACCACATGCTGAGCTTCCAGGAAATCCAGGCAGGCCTCACCTTGGCCG
ACCTGTTTGCCTTTTACGATAGCAACGGTGACGGATTCCTGTATGGTACG
GAGGCGGATCGCCTCTACGCCATGTACGACGCGGCGTACGGGCCCGCGCC
GGTGCGCGTAAGCAGGCAGGCTGTCGACGGTCTTGACACCAACAACGACG
CGCATCTCACCCTGAGCGAGTGTGAGGCCGGACTGAACCTGTCCGTAGTC
GCCGTCGTTCTGGACACCGACGGTGACATGATGTTCACCGTTGACGAGGC
GCTGCAGTTCATCGACCATCACTACTTCAACGTCCTCGACACCAACCACG
ACCACATGCTCAGCTTCCAGGAACTTAGAGACGGTGTGACCTGGGCTGAC
CTGTTTTCCTTCTACGACAGAAACGATGACGGCTTCCTGTACGGTGCAGA
GGCGGACAAGGTCTACTTCATGTACAACGAGGTACAAAACGCCGCCATCC
CGAACTGACTGACTTCAACCAACCAACCAACCAAACCAACCATGACTCCC
TTCCTCCTCCTCTTTGTTGCCCTGGCAACGGCTTCTCCAATGAAGAGACA
GACCCCTCCACTGGACGCTGATGGCGACGGACATCTCACCATTATTGAAG
TGGACAACGCTATGGACCTGGATGTGGTCCTGGTGGCCTTGGACACCGAC
ATGGACCAGCAGTTCACCGTTCAACAGGCTCTGCAGTTCCTTGACCACCA
CTACATCAACGTCCTCGACACCAACCACGACCACATGCTGAGCTTCCAGG
AAATCCAGGCAGGCCTCACCTTGGCCGACCTGTTTGCCTTTTACGATAGC
AACGGTGACGGATTCCTGTATGGTACGGAGGCGGATCGCCTCTACGCCAT
GTACGACGCGGCGTACGGGCCCGCGCCGGTGCGCGTAAGCAGGCAGGCTG
TCGACGGTCTTGACACCAACAACGACGCGCATCTCACCCTGAGCGAGTGT
GAGGCCGGACTGAACCTGTCCGTAGTCGCCGTCGTTCTGGACACCGACGG
TGACATGATGTTCACCGTTGACGAGGCGCTGCAGTTCATCGACCATCACT
ACTTCAACGTCCTCGACACCAACCACGACCACATGCTCAGCTTCCAGGAA
CTTAGAGACGGTGTGACCTGGGCTGACCTGTTTTCCTTCTACGACAGAAA
CGATGACGGCTTCCTGTACGGTGCAGAGGCGGACAAGGTCTACTTCATGT
ACAACGAGGTACAAAACGCCGCCATCCCGAACTGACTGACTTCAACCAAC
CAACCAACCAAACCAACCATGACTCCCTTCCTCCTCCTCTTTGTTGCCCT
GGCAACGGCTTCTCCAATGAAGAGACAGACCCCTCCACTGGACGCTGATG
GCGACGGACATCTCACCATTATTGAAGTGGACAACGCTATGGACCTGGAT
GTGGTCCTGGTGGCCTTGGACACCGACATGGACCAGCAGTTCACCGTTCA
ACAGGCTCTGCAGTTCCTTGACCACCACTACATCAACGTCCTCGACACCA
ACCACGACCACATGCTGAGCTTCCAGGAAATCCAGGCAGGCCTCACCTTG
GCCGACCTGTTTGCCTTTTACGATAGCAACGGTGACGGATTCCTGTATGG
TACGGAGGCGGATCGCCTCTACGCCATGTACGACGCGGCGTACGGGCCCG
CGCCGGTGCGCGTAAGCAGGCAGGCTGTCGACGGTCTTGACACCAACAAC
GACGCGCATCTCACCCTGAGCGAGTGTGAGGCCGGACTGAACCTGTCCGT
AGTCGCCGTCGTTCTGGACACCGACGGTGACATGATGTTCACCGTTGACG
AGGCGCTGCAGTTCATCGACCATCACTACTTCAACGTCCTCGACACCAAC
CACGACCACATGCTCAGCTTCCAGGAACTTAGAGACGGTGTGACCTGGGC
TGACCTGTTTTCCTTCTACGACAGAAACGATGACGGCTTCCTGTACGGTG
CAGAGGCGGACAAGGTCTACTTCATGTACAACGAGGTACAAAACGCCGCC
ATCCCGAACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000011 | genome | Sc0000011:1829877..1833734 - |
Properties
| Property Name | Value |
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| Transcript id | BL97467_cuf8 |
| Biotype | protein_coding |
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