|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97271_cuf7 >transcript:BL97271_cuf7-protein ID=transcript:BL97271_cuf7-protein|Name=transcript:BL97271_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=170bp
TARSALPVTMETPRGACPTTAPAAPAPWWRTPTTSAPPVWRWTGASSVIA
AHLDMKASNAKRCADGYFGNPLEVGNLCKQCTCNGNIDLSDEGNCDTITG
ECLKCVGNTAGDECERCADGYFGDAINAKNCQRCLCHPRGSYEEDCNLNS
GQCRCRPNVVGRDCDQCAVS Run BLAST on NCBI mRNA from alignment at Sc0000002:2064456..2066206- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97271_cuf7 ID=transcript:BL97271_cuf7|Name=transcript:BL97271_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=1751bp|location=Sequence derived from alignment at Sc0000002:2064456..2066206- (Branchiostoma lanceolatum)
ACTGCGAGGTCTGCGCTCCCGGTTACTATGGAGACGCCACGCGGGGCATG
CCCGACGACTGCTCCCGCTGCGCCTGCCCCCTGGTGGAGGACTCCAACAA
CTTCAGCCCCACCTGTGTGGCGATGGACGGGGGCGTCTTCTGTGATCGCT
GCCCACCTGGATATGAAGGCTTCCAATGCGAAAAGTAAATGTCAACTTTC
CAGTCCCCCATTGTTTAAAGTTCTTTCTGCCTCTTTGCTCTGTATCCAAT
GTAAATTTGGTCAAATTGTGATATGAAGGCTTCCAATGGGAAAAGTAAAT
GTGAACTTGTTTAACCTTCTCCCTGCTGCCTAACCCAGTGTTAAACCAAA
GCAAATTTGGAGCCGAAAGGCCACCATATATATGCATGGCAGGAAAAAGG
TTAAGTTTCATTGTGGAATAGTCATTTGCAATGGTTGAGAAGCCTGTATT
TTGTGAATCAACTGTTAATGGTCATGTGCATAAATGATGGGTGAAGTGTA
AGTGTTGAGTTATATGCTTTATAACTCTTATTGATTGTGTCAATGGCAAT
GATTAATATCTAAGGGCCTAGTGGTCATTATATAATGGTGATCACTTGTA
CAGGTTTTATTCTCCAAGCAGAGGTTTTGGTCGGGTGGGGTAGTAGTGGA
GAATACACAGGTTTGACTGTAGTCAATTTTCCCACCTTTTCTATTGGTAT
CATCATTGACTTGATGTTCCATTGTCATCACCAGGTGTGCTGATGGCTAT
TTTGGCAACCCTCTTGAGGTGGGCAACCTGTGCAAGCAGTGCACCTGTAA
CGGCAACATCGACCTTTCCGACGAAGGCAACTGCGACACCATCACCGGCG
AGTGTCTGAAGTGCGTAGGGAACACCGCTGGCGACGAGTGTGAACGTTGT
GCTGACGGCTACTTCGGAGATGCCATCAACGCCAAGAACTGTCAGCGTGA
GGAATTTAAACTTACTTTGCACTTCTGCTGCACACTTATATTTCTGTTGA
GAATTATATTGCACTCCCAATTTTTGGGGTATTTTTAGGCAAAATTATAT
TTTGGGCTCCTGTGCCCTGGTATTACAAGCAAATGACCTGAAATTTGGTA
CAAGGGAGCCTTGAACATGTCCCTACTGGACTTCAATTATCACATTTTTG
GTAATATTTGGGCCTATTTTCAGACCAAAAATGGGCCAAAAGTGCTATCC
CCGTTCCGTGTTCGATTTAAGGTTTGGCACATTCCATCTGCCGCTGGCCA
TCGGACACATGTTCCATTTGTGTTACCTGAGATCATTTTGCAGGAGCACG
TGCTCAAAACGTCCATTATTGCATGGGGAGGGGATGAAATATGCTGTATT
TGCGCGGGAACAAATGTCTGCCTTTTTAGTTTGAATTGATGTCATAATCA
ATCAGCATATAGAGAGGGTGAACAGTGTGTTGTGTGGTTTGATGATTTAT
TCTTTTAAAGTCATTTAAATTACTTGATGCAAAAGAGAATGAATGGAAGG
TTAAACTTTGCGTTTTAGCTTAAATATATAACCATTTCAAAGAAATCTTT
TCACCTCTTCACTGGTATACCTAATATGCATTAGTAGTTCAGTATGTAGA
AGGCTCAATGCTGTTGCTTTACATTTTTGTGCTGTAGGATGCCTTTGCCA
CCCCCGTGGTTCGTACGAGGAAGACTGTAACCTGAACTCCGGCCAGTGTC
GCTGCAGACCCAACGTGGTGGGACGGGACTGTGACCAGTGTGCCGTGAGT
T Coding sequence (CDS) from alignment at Sc0000002:2064456..2066206- >transcript:BL97271_cuf7 ID=transcript:BL97271_cuf7|Name=transcript:BL97271_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=1530bp|location=Sequence derived from alignment at Sc0000002:2064456..2066206- (Branchiostoma lanceolatum)
ACTGCGAGGTCTGCGCTCCCGGTTACTATGGAGACGCCACGCGGGGCATG
CCCGACGACTGCTCCCGCTGCGCCTGCCCCCTGGTGGAGGACTCCAACAA
CTTCAGCCCCACCTGTGTGGCGATGGACGGGGGCGTCTTCTGTGATCGCT
GCCCACCTGGATATGAAGGCTTCCAATGCGAAAAGGTGTGCTGATGGCTA
TTTTGGCAACCCTCTTGAGGTGGGCAACCTGTGCAAGCAGTGCACCTGTA
ACGGCAACATCGACCTTTCCGACGAAGGCAACTGCGACACCATCACCGGC
GAGTGTCTGAAGTGCGTAGGGAACACCGCTGGCGACGAGTGTGAACGTTG
TGCTGACGGCTACTTCGGAGATGCCATCAACGCCAAGAACTGTCAGCGAT
GCCTTTGCCACCCCCGTGGTTCGTACGAGGAAGACTGTAACCTGAACTCC
GGCCAGTGTCGCTGCAGACCCAACGTGGTGGGACGGGACTGTGACCAGTG
TGCCGTGAGTACTGCGAGGTCTGCGCTCCCGGTTACTATGGAGACGCCAC
GCGGGGCATGCCCGACGACTGCTCCCGCTGCGCCTGCCCCCTGGTGGAGG
ACTCCAACAACTTCAGCCCCACCTGTGTGGCGATGGACGGGGGCGTCTTC
TGTGATCGCTGCCCACCTGGATATGAAGGCTTCCAATGCGAAAAGGTGTG
CTGATGGCTATTTTGGCAACCCTCTTGAGGTGGGCAACCTGTGCAAGCAG
TGCACCTGTAACGGCAACATCGACCTTTCCGACGAAGGCAACTGCGACAC
CATCACCGGCGAGTGTCTGAAGTGCGTAGGGAACACCGCTGGCGACGAGT
GTGAACGTTGTGCTGACGGCTACTTCGGAGATGCCATCAACGCCAAGAAC
TGTCAGCGATGCCTTTGCCACCCCCGTGGTTCGTACGAGGAAGACTGTAA
CCTGAACTCCGGCCAGTGTCGCTGCAGACCCAACGTGGTGGGACGGGACT
GTGACCAGTGTGCCGTGAGTACTGCGAGGTCTGCGCTCCCGGTTACTATG
GAGACGCCACGCGGGGCATGCCCGACGACTGCTCCCGCTGCGCCTGCCCC
CTGGTGGAGGACTCCAACAACTTCAGCCCCACCTGTGTGGCGATGGACGG
GGGCGTCTTCTGTGATCGCTGCCCACCTGGATATGAAGGCTTCCAATGCG
AAAAGGTGTGCTGATGGCTATTTTGGCAACCCTCTTGAGGTGGGCAACCT
GTGCAAGCAGTGCACCTGTAACGGCAACATCGACCTTTCCGACGAAGGCA
ACTGCGACACCATCACCGGCGAGTGTCTGAAGTGCGTAGGGAACACCGCT
GGCGACGAGTGTGAACGTTGTGCTGACGGCTACTTCGGAGATGCCATCAA
CGCCAAGAACTGTCAGCGATGCCTTTGCCACCCCCGTGGTTCGTACGAGG
AAGACTGTAACCTGAACTCCGGCCAGTGTCGCTGCAGACCCAACGTGGTG
GGACGGGACTGTGACCAGTGTGCCGTGAGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:2064456..2066206 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97271_cuf7 |
| Biotype | protein_coding |
|
