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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97092_cuf7 >transcript:BL97092_cuf7-protein ID=transcript:BL97092_cuf7-protein|Name=transcript:BL97092_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=256bp
LDIDECSSQPCFNNGTCVDAVNSFSCQCPVGYTSDLCEIDIDECESDPCQ NGATCLDQVGSYTCVCAPAFSGANCETEVPSDFNLEFESSGTVDYVMIDS IPSLKALTCAFWMRSTDKQNYGTPLSYATSLEDNTFVLTDYNGFVLYIGG NSKVTDVTANDGRWHHICVTWTSEGGVWRIYKNGYPVDEGQGLGTDSVIP GGGAFVLGQEQDSLGGDFNAPQSFIGQMSLLQLWDYVLSEDDVFTMATTC QKNVGN Run BLAST on NCBI mRNA from alignment at Sc0000001:7090445..7092864- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97092_cuf7 ID=transcript:BL97092_cuf7|Name=transcript:BL97092_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2420bp|location=Sequence derived from alignment at Sc0000001:7090445..7092864- (Branchiostoma lanceolatum) CTTGGATATCGATGAGTGTTCCAGTCAACCCTGTTTCAACAACGGAACCT
GTGTTGATGCTGTCAACTCCTTTAGGTGAGTTTGTTACCTGCCATACTAT
TCATGGCTGCTAGGGGTCTCTTTTAGACTTTCAATACAAGCACTTACAAG
TCTTTCATACCTTCATTCATTGTAGGTCAATCGATATTTACTGCTACCAT
GGGATGAATTATACTCAAAATGGTCTTCATTTGTCAAATAAGGAATTCTC
TCCTAACAGGATTTTCCTTTTTTAAGAAGTTATATAATTTTTTTTTCTAC
CTCAGCTGCCAATGCCCGGTGGGATACACCTCTGATCTGTGTGAGATCGA
CATTGATGAGTGTGAGTCTGATCCCTGTCAGAACGGTGCCACCTGCCTGG
ACCAGGTGGGCAGCTACACCTGTGTGTGCGCACCTGCCTTCTCAGGCGCC
AACTGTGAGACAGGTGAGTGCGATGTTCACTGTCATTTTCACTGTAAATA
GTTGTTCAAACCACAACCTCCTAATCCTCCAGGTTACATAAATCTGCCAC
TTTGAAAAACAGTGGGCTAGAGACATCTCTAGTGCAGCACCCCCAGGTAT
GTACAGGTTTTATGTACAGGAGTCCATTATACTATGGGATGTTGGGTTGG
AGATCTGTTTGGACGTACGTTTTCTTGGTGGCTGAATTATGTGATGGAAT
TATGTTTTAGTAGATGTTAATCCTTTTGTAGGTAATGAAATGCTCAAGGT
ATGCTGATAGCCCTTTTTTTTTACAACAATAACTACATGTACAACAAATG
TATCTGATTTTTCTTGCAGAGGTGCCCTCGGATTTCAACCTTGAGTTTGA
GAGCTCTGGAACCGTTGATTACGTGATGATTGACAGCATCCCATCACTGA
AGGCGCTGACGTGTGCCTTCTGGATGCGCAGCACGGACAAGCAGAACTAC
GGGACCCCGCTGTCTTACGCAACAAGCCTAGAGGACAACACATTTGTGCT
GACAGACTATAATGGGTTAGTTACCTTTGCCAAGAAGGTTATGTTTTGGG
GAGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAAT
TATGATTATTTGCATGATAAATGAAAAACACATGATACATCAGTCAAAAA
GGTTAGAATCATTTGGCAAAAGTGTGAGATCGTGGAACTCTTAGACTAGT
TGTTTTGCAGCCATACATTTCACCTTTATCTTACCTTCCCAGTCATAATC
ATCACTTGAATTTGTTCTACAGGCTTAGGTTTTTCTGATGTTGGTAAGTA
TGAAAATGAATGAATATTTCATGGAGATATGAGGTCTTTTTGAACTCTTG
TTGGTTTTGCAGCCATACATCTCATTTTTATCTTCTAAATACTAACCATT
ACAAAGTCTTTAACTTTTTCTACAAGACTAGTACAAGCTTAGGAATTTTC
TGATGTTGGTAAGATGATGAAAATGAATGAATATTTTGTGAAAAGCTCGT
GATGTTCCCATCTGGAATAAAAAGCTGTTCTTTTTCAATATTTTATTTCA
GTTTTGTGCTGTACATCGGTGGGAACAGCAAGGTGACAGACGTGACAGCA
AACGACGGTCGCTGGCATCACATCTGTGTCACGTGGACCTCAGAGGGAGG
GGTGTGGAGGATCTACAAAAATGGCTACCCGGTGGACGAGGGACAGGGAC
TGGGAACGGACAGTGTTATACCAGGTGAGAGATGTAATGGTGATGATGCG
CTGTGCTCTGCAGCTACATGTACATGTGTGTGTAGAAATATGCCACAGCT
CTCTTCATTTTGTTCTATTGTGATGACTCCATATAAAGGGGAGCACAAAC
TGGTCGTGTGGTTGGAAATAACAACTTAGATTGGAGGTTCAACCCCGTTG
AATACCACTGGTAGAGGTAGCAGTCCTTCATAGGGATTAACTAGGACACC
AGTCCTGTGTATGAGAAGACCCACACCTTGCCATGGTCAAGATCTAAGCA
GCATGCTCAAGCAAGAAAGAAGTACCAGGACAATGCTGGAGTGTGTGATC
ATGATGGTTAAAGAAAAAAGTGACAGACAAAAGAGATTGAGATTTGAAAC
TTAGTTTAAACACCAAAATTAATGATTCTTGATGCTTAATTGACTGAATC
ACTGAAAATGATCTTGTTTGATTGAGACGTACTTGAAAATATCTTATATC
ATCATTCCTGTCATTCTTATTTGTGGTGCTCATCTTGCTGTTGTTGTTTA
CAGGAGGAGGTGCTTTTGTCTTGGGACAAGAACAGGACTCGCTAGGAGGA
GACTTCAACGCCCCCCAGTCGTTCATCGGTCAGATGAGCCTCCTACAACT
GTGGGACTACGTCCTGTCAGAGGATGACGTCTTCACCATGGCAACCACCT
GTCAGAAGAATGTGGGAAAT Coding sequence (CDS) from alignment at Sc0000001:7090445..7092864- >transcript:BL97092_cuf7 ID=transcript:BL97092_cuf7|Name=transcript:BL97092_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=3840bp|location=Sequence derived from alignment at Sc0000001:7090445..7092864- (Branchiostoma lanceolatum) TTGGATATCGATGAGTGTTCCAGTCAACCCTGTTTCAACAACGGAACCTG TGTTGATGCTGTCAACTCCTTTAGCTGCCAATGCCCGGTGGGATACACCT CTGATCTGTGTGAGATCGACATTGATGAGTGTGAGTCTGATCCCTGTCAG AACGGTGCCACCTGCCTGGACCAGGTGGGCAGCTACACCTGTGTGTGCGC ACCTGCCTTCTCAGGCGCCAACTGTGAGACAGAGGTGCCCTCGGATTTCA ACCTTGAGTTTGAGAGCTCTGGAACCGTTGATTACGTGATGATTGACAGC ATCCCATCACTGAAGGCGCTGACGTGTGCCTTCTGGATGCGCAGCACGGA CAAGCAGAACTACGGGACCCCGCTGTCTTACGCAACAAGCCTAGAGGACA ACACATTTGTGCTGACAGACTATAATGGTTTTGTGCTGTACATCGGTGGG AACAGCAAGGTGACAGACGTGACAGCAAACGACGGTCGCTGGCATCACAT CTGTGTCACGTGGACCTCAGAGGGAGGGGTGTGGAGGATCTACAAAAATG GCTACCCGGTGGACGAGGGACAGGGACTGGGAACGGACAGTGTTATACCA GGAGGAGGTGCTTTTGTCTTGGGACAAGAACAGGACTCGCTAGGAGGAGA CTTCAACGCCCCCCAGTCGTTCATCGGTCAGATGAGCCTCCTACAACTGT GGGACTACGTCCTGTCAGAGGATGACGTCTTCACCATGGCAACCACCTGT CAGAAGAATGTGGGAAATTTGGATATCGATGAGTGTTCCAGTCAACCCTG TTTCAACAACGGAACCTGTGTTGATGCTGTCAACTCCTTTAGCTGCCAAT GCCCGGTGGGATACACCTCTGATCTGTGTGAGATCGACATTGATGAGTGT GAGTCTGATCCCTGTCAGAACGGTGCCACCTGCCTGGACCAGGTGGGCAG CTACACCTGTGTGTGCGCACCTGCCTTCTCAGGCGCCAACTGTGAGACAG AGGTGCCCTCGGATTTCAACCTTGAGTTTGAGAGCTCTGGAACCGTTGAT TACGTGATGATTGACAGCATCCCATCACTGAAGGCGCTGACGTGTGCCTT CTGGATGCGCAGCACGGACAAGCAGAACTACGGGACCCCGCTGTCTTACG CAACAAGCCTAGAGGACAACACATTTGTGCTGACAGACTATAATGGTTTT GTGCTGTACATCGGTGGGAACAGCAAGGTGACAGACGTGACAGCAAACGA CGGTCGCTGGCATCACATCTGTGTCACGTGGACCTCAGAGGGAGGGGTGT GGAGGATCTACAAAAATGGCTACCCGGTGGACGAGGGACAGGGACTGGGA ACGGACAGTGTTATACCAGGAGGAGGTGCTTTTGTCTTGGGACAAGAACA GGACTCGCTAGGAGGAGACTTCAACGCCCCCCAGTCGTTCATCGGTCAGA TGAGCCTCCTACAACTGTGGGACTACGTCCTGTCAGAGGATGACGTCTTC ACCATGGCAACCACCTGTCAGAAGAATGTGGGAAATTTGGATATCGATGA GTGTTCCAGTCAACCCTGTTTCAACAACGGAACCTGTGTTGATGCTGTCA ACTCCTTTAGCTGCCAATGCCCGGTGGGATACACCTCTGATCTGTGTGAG ATCGACATTGATGAGTGTGAGTCTGATCCCTGTCAGAACGGTGCCACCTG CCTGGACCAGGTGGGCAGCTACACCTGTGTGTGCGCACCTGCCTTCTCAG GCGCCAACTGTGAGACAGAGGTGCCCTCGGATTTCAACCTTGAGTTTGAG AGCTCTGGAACCGTTGATTACGTGATGATTGACAGCATCCCATCACTGAA GGCGCTGACGTGTGCCTTCTGGATGCGCAGCACGGACAAGCAGAACTACG GGACCCCGCTGTCTTACGCAACAAGCCTAGAGGACAACACATTTGTGCTG ACAGACTATAATGGTTTTGTGCTGTACATCGGTGGGAACAGCAAGGTGAC AGACGTGACAGCAAACGACGGTCGCTGGCATCACATCTGTGTCACGTGGA CCTCAGAGGGAGGGGTGTGGAGGATCTACAAAAATGGCTACCCGGTGGAC GAGGGACAGGGACTGGGAACGGACAGTGTTATACCAGGAGGAGGTGCTTT TGTCTTGGGACAAGAACAGGACTCGCTAGGAGGAGACTTCAACGCCCCCC AGTCGTTCATCGGTCAGATGAGCCTCCTACAACTGTGGGACTACGTCCTG TCAGAGGATGACGTCTTCACCATGGCAACCACCTGTCAGAAGAATGTGGG AAATTTGGATATCGATGAGTGTTCCAGTCAACCCTGTTTCAACAACGGAA CCTGTGTTGATGCTGTCAACTCCTTTAGCTGCCAATGCCCGGTGGGATAC ACCTCTGATCTGTGTGAGATCGACATTGATGAGTGTGAGTCTGATCCCTG TCAGAACGGTGCCACCTGCCTGGACCAGGTGGGCAGCTACACCTGTGTGT GCGCACCTGCCTTCTCAGGCGCCAACTGTGAGACAGAGGTGCCCTCGGAT TTCAACCTTGAGTTTGAGAGCTCTGGAACCGTTGATTACGTGATGATTGA CAGCATCCCATCACTGAAGGCGCTGACGTGTGCCTTCTGGATGCGCAGCA CGGACAAGCAGAACTACGGGACCCCGCTGTCTTACGCAACAAGCCTAGAG GACAACACATTTGTGCTGACAGACTATAATGGTTTTGTGCTGTACATCGG TGGGAACAGCAAGGTGACAGACGTGACAGCAAACGACGGTCGCTGGCATC ACATCTGTGTCACGTGGACCTCAGAGGGAGGGGTGTGGAGGATCTACAAA AATGGCTACCCGGTGGACGAGGGACAGGGACTGGGAACGGACAGTGTTAT ACCAGGAGGAGGTGCTTTTGTCTTGGGACAAGAACAGGACTCGCTAGGAG GAGACTTCAACGCCCCCCAGTCGTTCATCGGTCAGATGAGCCTCCTACAA CTGTGGGACTACGTCCTGTCAGAGGATGACGTCTTCACCATGGCAACCAC CTGTCAGAAGAATGTGGGAAATTTGGATATCGATGAGTGTTCCAGTCAAC CCTGTTTCAACAACGGAACCTGTGTTGATGCTGTCAACTCCTTTAGCTGC CAATGCCCGGTGGGATACACCTCTGATCTGTGTGAGATCGACATTGATGA GTGTGAGTCTGATCCCTGTCAGAACGGTGCCACCTGCCTGGACCAGGTGG GCAGCTACACCTGTGTGTGCGCACCTGCCTTCTCAGGCGCCAACTGTGAG ACAGAGGTGCCCTCGGATTTCAACCTTGAGTTTGAGAGCTCTGGAACCGT TGATTACGTGATGATTGACAGCATCCCATCACTGAAGGCGCTGACGTGTG CCTTCTGGATGCGCAGCACGGACAAGCAGAACTACGGGACCCCGCTGTCT TACGCAACAAGCCTAGAGGACAACACATTTGTGCTGACAGACTATAATGG TTTTGTGCTGTACATCGGTGGGAACAGCAAGGTGACAGACGTGACAGCAA ACGACGGTCGCTGGCATCACATCTGTGTCACGTGGACCTCAGAGGGAGGG GTGTGGAGGATCTACAAAAATGGCTACCCGGTGGACGAGGGACAGGGACT GGGAACGGACAGTGTTATACCAGGAGGAGGTGCTTTTGTCTTGGGACAAG AACAGGACTCGCTAGGAGGAGACTTCAACGCCCCCCAGTCGTTCATCGGT CAGATGAGCCTCCTACAACTGTGGGACTACGTCCTGTCAGAGGATGACGT CTTCACCATGGCAACCACCTGTCAGAAGAATGTGGGAAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000001 | genome | Sc0000001:7090445..7092864 - |
Properties
Property Name | Value |
Transcript id | BL97092_cuf7 |
Biotype | protein_coding |
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