transcript:BL96573_cuf5 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL96573_cuf5
Unique Nametranscript:BL96573_cuf5
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL96573_cuf5

>transcript:BL96573_cuf5-protein ID=transcript:BL96573_cuf5-protein|Name=transcript:BL96573_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=202bp
MQIYKLLLMLAAVITARAQSCDFDFGWCSYTDNNGQMEWDRYNVAGPLYA
FHAINPMFPGSGPADDHTQPVGHDGSYVMSNCGGATAAGDVATITSPDII
GPCTLEFWYTMYGTDLDMSVYLLQKGQKTQVWHREDVNEDFWQQASVQLS
PPLQEAYQLVFETVRDVNHLCSVAFDDIKLAPAPLLKCDFENTGPCALRQ
DV
Run BLAST on NCBI

mRNA from alignment at Sc0000000:5885776..5902943-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL96573_cuf5 ID=transcript:BL96573_cuf5|Name=transcript:BL96573_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=17168bp|location=Sequence derived from alignment at Sc0000000:5885776..5902943- (Branchiostoma lanceolatum)
TGACGAACGACCATCACAGGGATGCAGATCTACAAACTTCTGCTTATGCT CGCGGCTGTCATCACAGGTAATTTGACCTTTCGTTGACTTATCATATTCT GAACAGGACTTCGCAATGCTAGTCAAACTCAAACATACGTAACTTATTAT AGGACCATGTTATGTATAATACAACCAGTATGATACCGTGCGCTGTTGAT GCAGATAACGTTATCGTTATAAAGTACCGTATGTCTGGTCGGCTCTTACT ACGTACATGTATAACGTTATTTGGAGGCTAGAGTGGGTTGTGAGACGGAC TTGGTAACTATGGACACGAGACGGCGGAAATTCTGAGCGACTACAGTACA ATAGCTATGATTAATGAGTGGTTAAGGACACATACATTGTATTCTTTTGC GTTGAAAAACGTCCGATGACATTGATTTAAAATCAAATCTTTGTTGATTG ATATCCTGCATATGTAACAGGAGCATATCACTAACAAAACTCATCATTCA AGGCAACCATTCTTACAACATCAACTAGAGGTTGTTGAAAAAGTCAAGTA ACTAGAAATGCAACATTTGCACGAGCAAATACAACCTTATTTTGTCCATT TCCCTCCCCATGCGAAAAGCGACTGTTCTAAAATCACCCCTATGCAAAAA AATGGAGCAAAATAACGTTTAACTATCATAAAGTAAGACCATGTAATGAC CATTGTAAATATCAACGCCATCCAGGCTAACGTTTGTTGTATGTCTGCAA TATTGGTATTTGACTAAAAATTCGAATTGAATTGAAGACCAGTCTGAAAT GGATCTCTCCCAACTTAAAACACTATGCGTGGATGGGCTCTTCCAAGGCA CACATATTCATACTGGGCCATTAAAAAATAAACCTCCACCAAAAATCCTG GACCCTTCTTGACAATCAACCAAGTCCAAAATTGAATTTTTAAAAATGGC CCCCTCATACAAGAATTGACTCTTCAAGCGGTGTATGGACCAACATGTAT TATGCAAATTTCAGAATATTCGAATGTAAACAACTTGAATCTTGCTGAAG ATCTAAATTTCTTCTGCGGAATAATTTCCGCAATCCGAGGGTCCAGATAT TTTCATTACGTAGCGAACAGCTTCGTAACCAACTCAGGTTTTGCAAACGT TTCCCAAATTTCTGCTGAACGTACCGCAAATTTCTGATGCGTATTTCGTG ACCTGTACTATGTACGTTTTTGGTCTGAAAATGGCCAAAAATCCTCAATA AAATCAAGGTATTTAAAAAAAAAGATTAAGAAATAAAACGTCTGGGGTAT GTGCTAACTCTACCTGGAAACCAAATATCAACCCATTTGGCCCAGGGACG ACCGAGATGGATCGCTTTGAAGATTTGACAGGAGAAAGCAACATGACCAA AAACAATATGTAACGTTGGGTAACATAAATTCGGGATTTTTCCGATAATG ATTGACTGAAATCAATCTAGCAGAACAATAAACCATCCTTTTTTTCTATT ATTCTGTCAGTATCATGTACTATCTTTGCACTAATCATATATATGGTAGA TTTTGTCTCTAGTCGTGCTGACACCATAATATTTAAACTTGAAACTACCG TCCGCCGCACGCACAATCACGGTGCTGTCGGACAGGGGGGCACATTAATT CGGGAGAGATGATTCGTCTTGAATATCTTACCGCTAATCACATTTTATAC AGCAGCTATTCGTTCCATCCTTGGCTTGAGGAGAGTGCTATGGATATAGA CGTGTCCAAGTAAAAAAAATACACGAAAAAACGGCCGTACCGCACGCATC AGGCCTTCGGGAACAACCCGTGTGTTGAGTCGGTAGAACGTCACTCAAAG TTCACCCCCACCGTCATGGAAATTTGTACATTATTCATCGGGGCGTTAGC TGGATGCCGTAGAAATGGTAATACTACTATGTCCATGTGTTTCTGCTTGT GCTAAGAGCAAACTTTGAGGAAAATATCGCCATCAGTCCACTATCACACA CAACATTTAGACAAAAAAGTGTTCCTCGCAAACGTTTGTCGTCTGCCGAA TAGCAGGATTCTGGGTAACGAATATGGCGGCGGGCAAATTCACCGTAGTG CCGTAGCCATTGGTTGTAGCATTGAAGAGGCGTTCTGATGATTGATCACA CTTAGAGTCCAGTTGTAGGTTAGCAAAAGAGATTCTAATAAGATGTATTG TAAATAATTGTGTTTAGCAGGAAGCGGATGTGACATTTGTCTTATAAACC AGCGAACAACTATGTAGATATAATTCTCCCACGAAGCCCTCAGACTGTGA CAATAAGGGACGGAGAGTTTTTGACGTAGCCAACTTCTAATGCATGGTTA TCGAAGCTTTTCAGACAGTGTTCTGAATACGTTAGTCTGTCAAGTTTGCA TTTCTAGCGGTATTACTGATGTTGCATCTAGCACATATCCCTAAATACCC CGTTTTCGAAAAATCCCGAATTTAAGTACCCCGCGAATTTATGTTACCCA ACGTTATCGTCCATACCTATAGTATGGGCGAAACATAACGAAAATTATTT GCATACAGTCTCATATTGCGTAAAATATTGGCTAGTATATAACGTTAGAT ACAAAGCTCCCATCATTTACCAGTGTTAATTTACCACTGAGGTATTTGCA AATTTTGTCATGTCAGTTCTGCACCCAAGTCACATGTATGAAAGTCTTAT CGTAGCACTATTCAGACTAATTTGATAATTATATGATTTGCATAATTTAT GTCTAATGGTGTTTACCTTTAACTGACCTCTAAATAACACAAGTATGACA TTCAAATCACTTACCGCTGTAATATGGCATTTCATCATTTCTTATCCAAA TGTGATCCTCATCTGGATAATTGATATCAATTGACGCCCCTGAACTTCTT TTTCCAAGCTATATGTGTCACTTAAAGTCTTATCGCGAAACACAGTGGAT TTTCAAAATAGCCTCATTATTGATGCAATTTACTTCAGCACCTAATTATG CTAACCATTTAAGCTTGACGTAAACTATCTACATGTCGTAAATCATGACA ATACAACAATCCCTCTTGTGTTTCAATGTCTCAATTATCAATTAAGCAGA AAGACGTCTTGACGAAGGCAGTAATGGGCATATATCTTCTCTACAGCACG GGCACAGTCGTGTGATTTTGACTTTGGGTGGTGCAGCTATACAGACAACA ATGGACAGATGGAGTGGGATAGATACAACGTAGCTGGCCCACTGTATGCA TTCCACGCAATCAACCCCATGTTTCCTGGCAGCGGACCAGCAGATGATCA CACGCAGCCAGGTAATCTTCTTTCTTTTGTAATAAAAGTTCCTCTCCTTT ACATGTACATCGCAGTAACAGTGGAAACATGCAATCATCTTGGCACCAGC GATCTTCATCAAATGTATGTTACATTTCCACTGTGGTTTCTGTTGACTTG AAGTGGGACACGATGGCTCCTATGTGATGTCAAATTGTGGAGGCGCAACA GCAGCAGGAGATGTAGCAACTATCACCAGTCCTGACATCATCGGCCCCTG TACCCTGGAGTTCTGGTACACCATGTACGGCACGGATCTGGATATGTCAG TCTACCTGTTACAGAAGGGACAGAAGACACAGGTCTGGCACAGAGAGGAT GTGAACGAAGACTTCTGGCAGCAAGCTAGTGTACAACTGTCTCCTCCTCT GCAAGAAGCTTATCAGGTAATAGCTGTCATTCAATCAGAAATGTAAAGTA TGTAAGGTAATGATACATATTGATATTCATTGCTAATTGACATTGAATTG AATTGTACTTTGCACCAATTTTAGACTTGGATAATCAAGAGAGCTTACGA GTATTACATTGTTGCGATATTGTTCTTTGCCTACAAAACAAAATGTTTAT TGTCTCCTCTTCGTCAAGCTTGTGTTTGAGACAGTGAGAGATGTAAATCA CCTGTGCAGCGTTGCCTTTGATGACATCAAGCTGGCCCCAGGTAACCACA ACTGTGATTTTTTTCTCGAATTGAATGTGACATGACCAAAGCACAATTAC CTAGATATAATGCTTGGAACTATTAGAAAGGTTATGACAGATCAACATGT CTAGATAGAACTGAACATCTATTGTGAACAAGTACCGTACCAATCATCAT CATCATGTTGTATCACTGAGCTTTCCTTACTAGTATATCTTATCATTGCT TTTAAACTTACGCGCAGCTCCACTGTTGAAGTGCGACTTCGAGAATACTG GTGCCTGTGCCCTGAGACAAGACGTCAGCGATGCGTTTGACTGGAGATGG CAGCAGGGCATGACGAGGACTCGGGAGGACCTCGTCAACAGGAACTTAAC AATGATCGCCCCTGACCTGATCACTGGACCGGGGTACGACGTCACACTCG GACCAGGTGGAAACGGTACGTGTGAATGGAAACATTGGCCCGATTTACGA CTTGGAGTCGACTCAGTGGCCCCAAGTCGACTCCATGTCGACTGCGCGAC TTGGACGCGTCAGAAAAGACTTGTGTAAATCGGGCTTGTGTTTAATCGTA GGGGAACATTTCAGCTTCGAAAGTAGACGTTCTCAAAACATTCTCAAACC AAGGCAAGGTAGCTGATAAGCCATCTCACAGTTCCAACTGCGCATGTGCA TTCGTGAGCAGTGCGTTCTTGTTAAAAGTTTAAGGTACCACACTGGACGC TCTGGGGGACCTTAACCTCTGACCTGACCCATAATTCCATGTGGAACTTT ACGTATCGGCTTAGCCGTATAGATTGTGATGCTGAGCCGCACACGTGGTC TGTAGTGAATAGAAACATTGTAAGTAGGCCCGACTATCTACAGAAATAAC ATCCAAATGTAGCGCAACGACCTCTATCATGTAGCGAAACAACTCGTACC ATGTAGCTAAACAACTTCTGTCATGTAGCGCGTAGCGAAACGGCTGTATC GTAGCGAAACACTCGGCTACCTGTGACTGTTGACAATAGCACCTGAACAT ATCTCATTCTAGGTACTTACATGTACGTGGAGTCTTCCCTCCAATCTGCT GGTCATCACGCCCGTCTGTCGTCTACAGAACTCAGCGGACAGTGTCTTGA GTTCTACTTCCACATGCTGGGAGCTCATTCTGGTGAGTAACAACTGTACA ATAACCGTCTAAATGCATTGTCAAGTAGCGTTGAATGTTATATACTTTAA ACAACTTGCATCAACAGATCGATGCTGATACACAGCTATTTCAGCTACGT CAACCACCGCTAACCAATGAGAAACAGCTGTTTTGGTGAATTATGTATAT CCCAAATAACTACGTACCAAATGGGGAAGACAAGTCACTTTTACCGAACA GTAGTCGACAAAATGCAAAGTTGATAAGACTAAAATGTTTTCTGCACAGG TACGTTGAAGGTATACCAGCAGTCTGTTTACGAGAACGACACATCAGAAC AGCTGATATGGGAAGTCTCCGGTAGTCATGGTGACGTGTGGCACAGGGCA GCGGTCAACCTCAACATCACTAATAACTTCTATGTACGTACATATTCATC AATAGACTGTTGTCTCGTTACATGTCATACTGTTTGTGTCTTCTTCCAAC GAAATAGTATCATCAGTTGACTTTCACTATGGCGTTGATGACTTGATTTT AGGTTCTTGGTGGTTTCGGAATGTTTTTGGCGCCTTGGTGCCTTTACTGA AAAGTTAACCATCTGAAACGTTGTTTTGCACATTATTCATAGCCAGAAAT ACATGTATAGGCACTATATTCCACGGTATGTTGTTTTCAACACAGATTAC TTTTGAGGCTGTGGTGGGCGGTTACTATAGTAATATAGCCATCGACGAGA TCAAAACTATGGATCAACCATGCAAGTGTAAGTATTACCTAGGTCTGATC TTGCCCTGTGTAGTTTCAGCGGCTATATTGGGAAGAATGACTAACACTAG AGCTTTGCGCAGAAATTTAAGCTTAAAGATATACACTTTTTAAACGATCT TTACATTGCCATACATTGACATTGTCATTCAGGTCAGCTGTACTGTAAAA GCTTTTTAATGCCTGCTTACGCTTGCTGCCTCGCCCGTGCTTGATATAGT GACAGGCGGCTGGGGTGATTGGGAAGACTGGACGGTCTGCGATGCTGACT GTGACGGCGGGACCCAGTCTCGAGCGGCGTACTGTGAGAACCCCTACCCG GTGTTCGGACACGGGTGTGAGGGGGACGACGACGGAGACATGAAGAGGGT AGAAATCAGGGCGTGTAACACACAGGCTTGTCCCAGTAAGTTCGCTGAAT GTTTTTGTAAAGACACAAGAAAATTCCCGAAGACAAGCACTATCTGAACT AGCTTCAACAACGCGTATCTCTAGTGGTACTAGTTTGAACAGTCGCCGCT GTTTTATATAGCTTTATTATGTTCTATGGTTTACGTTATGAATATGGTTG ACAGGATCATCTCTACTATAGTGTCTGTCTACAGTGTTGCATTATGACAT AGTCATCAAATAATGGAAGGGCTTTCACTTAAAGATGCCAAACACATTAT CTAAGGAGCACAGCAGTGTGACTATCTCTCTACCATGTTGATAAGTTTAT TATCTTGTTCTGATAGCTACCATGGCACCAACTACCACCCAAACTACAAC CATTGAAACAACCACAGAACCAACCACAATGGTGCAGACGACAACCATAG AAACTACAACCATGGCAACCACTACCGCGGAGACAACGGTAGACACCACA GTAGAACCTACAACAGACGATGTAGCAACCGCCGGGGTGACGACAGGTCA CTATAAAACAACAGCAGAAGTCACCAAGGCCTTCACAGAAAAGCCTTCTC CAAACCCTACAAAGATCGTTGATACTCTCAAGCCTATGTCTCTTGGTGAG TTCCGTCTTATTACATTACACACACACACACACACACACACACACACACA CACNACAAGTCACTTTTACCGAACAGTAGTCGACAAAATGCAAAGTTGAT AAGACTAAAATGTTTTCTGCACAGGTACGTTGAAGGTATACCAGCAGTCT GTTTACGAGAACGACACATCAGAACAGCTGATATGGGAAGTCTCCGGTAG TCATGGTGACGTGTGGCACAGGGCAGCGGTCAACCTCAACATCACTAATA ACTTCTATGTACGTACATATTCATCAATAGACTGTTGTCTCGTTACATGT CATACTGTTTGTGTCTTCTTCCAACGAAATAGTATCATCAGTTGACTTTC ACTATGGCGTTGATGACTTGATTTTAGGTTCTTGGTGGTTTCGGAATGTT TTTGGCGCCTTGGTGCCTTTACTGAAAAGTTAACCATCTGAAACGTTGTT TTGCACATTATTCATAGCCAGAAATACATGTATAGGCACTATATTCCACG GTATGTTGTTTTCAACACAGATTACTTTTGAGGCTGTGGTGGGCGGTTAC TATAGTAATATAGCCATCGACGAGATCAAAACTATGGATCAACCATGCAA GTGTAAGTATTACCTAGGTCTGATCTTGCCCTGTGTAGTTTCAGCGGCTA TATTGGGAAGAATGACTAACACTAGAGCTTTGCGCAGAAATTTAAGCTTA AAGATATACACTTTTTAAACGATCTTTACATTGCCATACATTGACATTGT CATTCAGGTCAGCTGTACTGTAAAAGCTTTTTAATGCCTGCTTACGCTTG CTGCCTCGCCCGTGCTTGATATAGTGACAGGCGGCTGGGGTGATTGGGAA GACTGGACGGTCTGCGATGCTGACTGTGACGGCGGGACCCAGTCTCGAGC GGCGTACTGTGAGAACCCCTACCCGGTGTTCGGACACGGGTGTGAGGGGG ACGACGACGGAGACATGAAGAGGGTAGAAATCAGGGCGTGTAACACACAG GCTTGTCCCAGTAAGTTCGCTGAATGTTTTTGTAAAGACACAAGAAAATT CCCGAAGACAAGCACTATCTGAACTAGCTTCAACAACGCGTATCTCTAGT GGTACTAGTTTGAACAGTCGCCGCTGTTTTATATAGCTTTATTATGTTCT ATGGTTTACGTTATGAATATGGTTGACAGGATCATCTCTACTATAGTGTC TGTCTACAGTGTTGCATTATGACATAGTCATCAAATAATGGAAGGGCTTT CACTTAAAGATGCCAAACACATTATCTAAGGAGCACAGCAGTGTGACTAT CTCTCTACCATGTTGATAAGTTTATTATCTTGTTCTGATAGCTACCATGG CACCAACTACCACCCAAACTACAACCATTGAAACAACCACAGAACCAACC ACAATGGTGCAGACGACAACCATAGAAACTACAACCATGGCAACCACTAC CGCGGAGACAACGGTAGACACCACAGTAGAACCTACAACAGACGATGTAG CAACCGCCGGGGTGACGACAGGTCACTATAAAACAACAGCAGAAGTCACC AAGGCCTTCACAGAAAAGCCTTCTCCAAACCCTACAAAGATCGTTGATAC TCTCAAGCCTATGTCTCTTGGTGAGTTCCGTCTTATTACATTACACACAC ACACACACACACACACACACACACACACACACACACACACACACACACAC ACACACACATACATACATACATACATACATACATACATACATACACACAT ACATACACATACATGCATTTGAAAATTGACACTCAACACTTGTGCAGGAA CATAAAGGGCAGTCTATCACACCACAAAAAGCTTTCATTACCTAGTCAAC CACTGATTCCTGGTTTGTACCAACACATCTCAACGACAGACTTACCTGTA AGATTCTATTTGTTCCAGAGTCAGAGAGTACCCCTGTTTGCACCAATGAG TACATGGAGTTAGCCCTACCGGCCCACCGGCTCGCTCACGTGATCACCAG CGGGCTGCATTGGGACTCGGACCCGAGCTGTCAAGCCACCTTCAACGGTA CCCACTACATCCTGCGCACCGGGCTCTATCAGTGCGGAACAAAGGTATCT GGTAGAGTAGACGCTTTGTTGCGACCTATTGAAAGCCATTCTGCGAAATA AGATTCGTGTCCGCTAAGACATTTCGCCTGTGCCGCCCATTTCCTCACAT ATCATACATAGGATTGGCTTCCTCGAGGCGCACACGAGCTTGAAACGTTG TCTTAGTGCCGCTCCAAGCTAGCGGAGAGCGCTCAGCTGCGACCGGGGTA AAGTCGCGATTCCAAGTTATGTTCGATCCGATGTGGCGCCTTGGCTTTAA TCTGCCAAAATACAATATGATTATGGTCTTGATTATCCATAGTCCATTGT GAAGAATAATTGTTTTATTCCATTGATCATTTCTCAGGAAAATATGCTTG TGCTGTACCTGAATTTTCTAATCCACTTACATAGGTCACGTTTGACTCGA AGTACGTCATCTTCTACAACAATGTCAGCCTCCTCTTCACCCATGATGGC GTCATCACTAGAGACCCGGATGTCGTCATCCACTCAGTGTAAGTAGCTTA TGCTTTTCAATCCATTGTTATAAAGAAATGGTAAAACATATACATAGATC ATAATGGATTGAAATCCTATCCTATCACGCTATACGTTGTTTTGAATATA TCCGGCATGACCAGTAGTTCCAAGAACGCACAAAATCTATTGGCAATTCG TCTTTTCGAGACAGACAAGACGAAGAACTTTACTCTAATCAGTAAACACT CTGTCTTTGAAAGACCCATGAGCTATGTTACATTAAATATCATATCTAAT ATCAAAATGTTGAAAGGCAAAATGTGCCGTCTGTCTAGTTCCCATTTCTG TTACAAACTGCCTTGTTGTGAAACGTGGAGCTAGAAAAGCGTCATAATTT AGCCTCTAGCATATGCAAGGGAATGTCTATAACAAGTGAAAACATTTGAT TAAACCACAAATACGCTAGTTCAAAGCGCAGGAAGTACATCCGCTCCTCT ATCTATCCCCAGCTGCAAGTACGATCGTGACGAGGCCGTGATGTCCGAGT TCCTGCCCATCCCGGGCGGACTGGAGTTTGTTGATGAAGGGTTCGGTCAG CTGTCCATCCGGCTGGACCTGTTTCCCACACAGACCTACCTGTCTCCGTA CAACACACCTGACTACCCGGTGAATTATCACCTGCGGGATATGATGTACC TGCAGCTTCAGGTGCAAGGCCACGCCAGACAGCTGTCCGTGATCGCCATG CACTGCGAGGCTACATCCGGGCACAACACCTCCCTCAAGTACCCACTGAT ACAGGACGGGTGAGCACAATTATGTCTATGGTAACGTTGAATCTTTAAAA GAAACTGAACTCCGAATCAGTAGGTTATCATCATTATATCATCCACTGGT TTCTGCATCTGTAGTCGTGGAAACGTCCTACAGTTACATTCAGTCGTTCT TAATCTTTTTCCACTGCGTCTTGCATCTTGCGAGCTCCCTTAGCTTTTGG ATCCGGAGTTTCTAAGTATGTTATATAGAAGATGATTGATAAGTATTCGT CACATCATCTAGAGCAGGCTAAAGGGAAGTGATTACACTAGTGGTATTAG AAATTGAAGTAAGAAAGTCACAATTATGGCAATAGATCAGTTACATTGTC TTGAAATATTGCGAGGAGTTATCATTTTTTTAATTTTTTATTTGGTCATG TATCAGTGCTTAACTTAAGTTGTAGACATGAACAAATCATGTTATGATTA TATCCTGGGAATATTTTACAGTTGTGCCTCGGACGACACCCTACAGTTCT ACGCACGACCTGACCCGGGTACACAGAGGTTCGGTCTGGAGGCCTTCCGC TTCGTACAGGAAGTGACGACAGTCAACATCCGGTGTGAGGTGGAAGTGTG CGATGCCGCTGACACAGGATCCCGCTGCGAACAGGTATCTTCAACTGAAT CATACATGTTTGGATAATAATATATCATAGATTAATTCTCCACTACGTAT TATTTCTGTCTAAAGTAAGGTCCTTGGTTGGTATTAAAGTCTTAGAACTG GAACACTTCCCTGACTTCCCAACAAATGCATCAACGATTTTTAACAGGGA TGCAGAACCAATCGTCATCACAAGAGGGCGCTCGCGGACGAGGATGACAT GAAAAGTCGCTTTGTGATCTCCCAGGGCCCAATCATCCTTACTGATTTCC AACAGGGTGAGCACAGTAGTCAATTTGAAAATTTCTAAGCCTCCATTTTG ACAAGACCTATGTCTGTCCTTGGTGCTGAAGTTCAACTCAACTAAAGTTA AAAGAATCTAATATTGCTTTCAATTTGCAGGAGACAATGCAAAGAACGCC GTCATTGCTGTTGGAGGATGTGCTGCGGTCATCGTTCTCGCTGCAGTTCT ACTGGCAGTCAAAGTGAGGCGCTCAAAGCGGGTACATCCGGGATACCAGC CACTCGTCAACCTTGATGCCGAGTGAAATCAGCAAAGATGCTTTTAATGC GTCGTTCTTTACGTTGTGCATTGCTCTAGTGTACCGATAAAGCGACCATA TATCTTGTGTGCTATCCAGCACCTGCTATCCTCTGTGTTCCATTTGGGTC ATGTTTGCAGTAACATGGTTTTCTTTGCATGTTTAATTGATGTTGTTGTA CGGGTTAAGAGGGAAAACTGATAAGGATTTCTTATCTATATGATTCTACT GTCACCTTGGAAAGGCTCGTGACGCTGATTTTAGTACTATAACATTTGCA TTTAAGTTCCTACACATTCTTTTTCTCCTTAGTAAATGTATATTACTTTT GCAACTCTGAATGGTTTCTTATGGTATGCGAATGTGCAAGTTTTTTTTAG TGATTCAGTCAACGTTGTTGAAAATTTCGATCACCTACCTAATATGTTAT CTGTCAATGTGTTCAAATAAAACTGGAGGATATAATAATGAGTGTTTGTC TCTTTCATTATACATCCTGTTTATACATTAATTACAATTGCATTTATTTA GTACTAATACCTATAATATAAAAGTTGGTAATAGACAGATAACGTATCAA AATATCAAATTTCAAAGACACACTGATCAATCATTTCAAAAAGATTTATC GTAGGAGTCATTTGTCGAAGAAAGATTACAAATTATATTATAAAGAATAG GGATTCCTTATAATAACTTTGCCACGCCACTAAAGATGTTTTATTGGGGT TGATTTTGTTTGTTATTCGAAAATCAATCATTGTTAACTTGATGATTAGA ACCGACCAGGACACGAACAAGTTGACCCGTAGCTCGACATCCTTAACAAA CAGACTCCGTCCCCGGACATGTACCGTGTGAACACCTGTGTCTCCCGGCA ACAGACCTACCATACCGCCATACTGATATCATTAGCTGTTTGGGTGTGAG TGATTCTATGTACTTAAGATAAGGGCGACTGTTTCAGTGGCTATTGAAAC GCTCTTGTTTAAAGAGACAAGGTTCATGATCCGAGTATTGGAGAAATAAC GTATTATGAAAAATATGAGTCTAAAATAGTTTTGATCTTATATTCATGTG CCCCCCACATGAACTAGGAACACTTGAGAGAAAATTCTACTTGGAAGCAG GAACGTAAAAACAAAACAACATCCTCCACACTGACTGTACTAAGACTTAG TTGTCAGGCTTGTATGCTGACGTGCATTTTTTTACGGACACTACAATTTT TCTCAAAGACCAATTTCTGGACTTCTTTATCTGAGCTAAAGTTTTTGTAA ATTGAATAATATTTCTTTGTTGCAAATTCAAATCAAGTGTATTCGTCATA GATCGATGTTCTGTTTGATAAATTAAAGCTGATAATGATCAGATAAAACC CAAATCTCTTTGATTCGACAACAAACAATACTTAATACCCAAGCGGAACC AAACATCAAACGAGAAAAAGCTACTTTTCATTAAACGCCTTAATGACTTG AGCTCTTATTCAAAAGTCATACATATTCATATTCATATTGACTAATGCTG CCATTATTCACAACGCTACGGAAACGCAATAAGTTTCATGTTTGTTACCG CGTTTCTTTAAAGCCCATCTTAATCTCCCCATTTCCTTATCAGTGAAATA CCGCGTACGCCACGTAGTTTAAGTATCACTTCCGTTAAGCACTCTAAACC ACCCACTAAGCAATTAACCTTGAACTTAGCCTCGACTTCCGCACTAATTC TTTGTAATAAAGGATTCATTAACAGATAGACATATCTATATAAAGTTATT TGCTAACACAATATTACTACAAAGCTGAGCGTGTTGAAACAATACAGGGA AAAAAAGCCCAGTATTCACAATTCTTCTTGGGTTGATGTATTAGGTATAT CAGCATTATGATTATCTGACATTCAAAAGCCGTTATGATTATAAATGACT TCTTAAAGCTTGGCGCTGTCAGTGCACAGTTTTAGCCCGTAACTTTTCTC ACCTCCGTATGCACCTTTACATCAATATTGTATATATATATTAGCAAAGG GATCGCTCGTAGCAATCAATTCGCAAATTGTGTGACAACAGACCCGTATA GAATTGAAAGGTGTTCCAAAAATAACCATTCATTTCAAGATGTATCTTCT GTTTACCATTGCAGTTTTGGGTCCAAACAGAGACGTCAGCTCTTTAGAAA ATTGTACATTTTCACCACGAACCTTATCGCAAGACACTATGCTGTTGTAG TTTGTCTGACATGGTATAAGAATGTATTTTCGGAATACCACAACCACCTA TCAACAGACTTTGTTATGTAAAGAACAATATCGCAGTAACTATAACAACA CCATCTATCCGTATCAGCTGCCCTTACACTAAGTCTATGTTTGGAGAAGT GTGTACAAAATATCAATCTTAGCCTCCATTAGGACAGGCCCCGATGAGCA AAACAAGCCGTCTGCCATGGTAACGTCGCCTACGTCATCAAGGTGAGGCA GGATACGGTAGGAGCGTTTTCCCGCGAAAGACAGGCTTACAGTTTCTCCT AGAAGATTCCTGCTTGATTTCTACAAGTTTACCACAATAGTTTTCTTCTG GATACATTTTCCGTTGGGAAAGGTCCATGGAATATGGAATTTTGACTCAA GATGGACGAATGACCCGTACGAAGATGCAGATGTACAGATTTATGCTGAC GCTCGCGGCTGTTGTTACAGGTGACGTGGCGTTTCTTTGTCTTCAACTTA ACATTACCTTGTCTTCCTTTTATGTGGAAATATTGAACTTAAGATAATGA TGGTAAGTAGTATATATGTATGATGTTGATGATGTAATAATGAAGCAAGG ATGCAGGTTTGAGTTATAGAAGCTGGAAATTCATTAAAGCAATCCGTAAT GATGAAAAGTTGTTGATTTTGTAGGTTACTCAGAAAACATTTTAGATTAT GCTCTTGGCATATCATATTGTAAGTACGAAAGTTGGACTGTTCCCATAAT TTTGCAGTCTAAACGCCGAAGTCATTGACGATTATTACACAAAAGTTGTA AAGCCAACGATTCTTAAGGGACGCGTATTCTATCCAATGCCTGGTTGTCT GGGCTCTCACGTTATTTGGATACTAGGTATCGGTAGCGTCTGAGGTAGAT AACACTTTCATTATTTAACAATCAACTTATGTACTTTGATCTAGCTAGGC GACTAGCCTTTATCACTGAAACTCTACCGCGTATGATTAAGTCTGCCTTG TTGAAAATAAAATTGCCTAACACTCAATGTACTGATAGCCACCTTTGTAC AAGTGGATTTGACCTATCAAGAGGAATAAAGGATGAATAAATCTAAAGGA CCAAGTAGAGAACATGCTGTATGTTGACAAGAGGCTTGTAGCATAAATTT TGCCAAAGTCATCGTCAGTCGTAAAAACAGCATCGTTAGATAAGGAACAT AGTCTAGTGATAGATTAATCATGTTCTAGACTGTTACTCATTTGCTGTTT TTTGTATCAAAATTTGAGGAAAGCACATAGAAACGTTATCACAATGGGGG GAATATGCAAGACAAACAAAACACTTCGGACGTCATAAGTGTGAATGATA GTCGTCAGGTACGACATATGATGAAATGCACACTATGATAAGGCATATTG ACCTGCTTGTATTGTGGTGGACTTTGCTGTGATTCGAACGAGAGGTATTA ACACGGTTTATATACAAGGTCATTAGCGCGCATTAAGGTCGAGTACAGGC AGTGTTCGTTGAGATATGGGCATGGTAGCTATGGACACGGGACGGCGGAA AGGTGTTGAATCTGCTGTAGGTGAGAGAGCTGCTCCCTCACCAATACACC GAAGGTCAGGACTTAGCTTATTTCAGGTAGTAACAAGCCTAGGAATGTAG GAGTGAATGTGCGCCGAGGTCTNGCCTAAGAATGTAGGAGTGAATGTGCG CCGAGGTCTTAGACCTTAGGAGTGAGCATGTGAGATACTAGACTCCTTGT GGGTCTAGAGGGAAACGAAACGTACTTTCCCACAATTGACCTTGACTTCA CAAATACCATAACGTCACAAACCTCACGCCTAAACGTAAGTGGTAGTAGT CGCAATGTTGTTAGTCTTTCTTTGTAGGTGAGGTGGCTAGCCTGGGGTCC TAGGATGAATTTGTTTGTCACATGTTTGAGAGTTCTATCATGAAATGCAG CGGAAGTATAAACTTTTCTCATTAATTGTGTAGTTGCTTCACTGATGATG GTACAACATGCTCTTTTCTGCATTTGTTGTAGTTAGTCTATTGAGATGCA TACACATCTACAAGGACATGTTTACTGTTCAATCAAGGAGGTCTTATATC ATATGAAACCTCATTCAATTTGGTTGAATACAGGAATAAAAGATCTGTTG GTCGTGATATCATATTCTGTCGCCTCAATTTTTGTTTAACAAGATTTATG ATCTCAAAATATGAAAATATAGAAATATTGGTTGCCCGCCTTGTTTTTGT TCGCCCTATCTCATTAGTTTTGGAGTCTGCGGAGGATGTCATCCATAAGA TTTACTTGCTTTGGCCTAAACTATTAAGATGTATTCTCTGCAGCTGCCCG GGCACAGTCGTGTGACTTTGATGCAGGTTGGTGCGACTGGACTGACAACA ATGGAGTGATGGAGTGGTATAGAACAGACACGACTGGTCCACAGTATGCA CTTCATGCAGTAAACCCCATGTTTCCTGGCAGTGGTCCAGCAGGTGATCA CACACAGCCAGGTAGATACCTCTGTCTCTCTTTCAACAACCTCGCCATTT CTTTGATGACAAATTCTCAAGATGTATAGTCACCAACGCTAAACTTATAA GTAAGTTTTTTGGGGGTGAACGAATTTTTGTGCCGGATGATTCATATGTA AATACTTTACACGTGTGCATTTGCAACGTTAGAAGTTGGTAGACAATGAA TTTGACTTTTTTAATGCATCGGTAAATCTAGTACTTCAACATTGGAGATT ACGCCAAGCAATATTACTGATCAAATTCATTTTTCATTTATACTGTGTTC TTTGATGACTTGAAGTTGGGTATGATGGCTGGTATGCGATGTCAAAGTGT GGAGGTGCAGTGCAACCCGGAGATGAGGCCACTATTACCAGTCCTGATAT CATCGGCCCCTGTACCCTGGAGTTCTGGTACACCATGTACGGCCTGGAAC TGGACATGTCAGTCTACCTGCTACAGAAGGGACAGAAGACACAGGTCTGG CACAAGGAAGATGTGAACGAAGACTTCTGGCAGCAGGCTAGTGTACCACT GTCTCCCCCTCTACAGGAAGCTTATCAGGTACAATTACTGTTATCTTCGA ATCTTTACCTAGCTGTATCCTCTTTCGTGGCTAAAGGAACTGAATTAGAG TATTGTTAAATCCTGTTTTCTGTCCAATGTACACTTTGAAACGTATATCT ATTTTTGTCCTCTCCGTTTAGGTTGTTTTTGAATCTGTGAGAGGGACCAA CTTCTTGTGCAACGTGGCCTTTGATGACGTCAATTTAGCTCCAGGTAAGA ACCAGTATGGAGGATTTGTCTACTTGATCAGGGGAGTGTTGAAAGTATTC ATTTGATATCTAGGATTTTGTTAGTTTATAATCAACAAAATATTAGATAT ACAGTATTAGATTATCACATTACAGCTTTCCTTCTATCTTATTTCTCCAC AAATCAGCTCCGCTGTTGAAGTGTGACTTCGAGAATACTGGCCCCTGTGC CCTGAGACAAGACGTCAG

Coding sequence (CDS) from alignment at Sc0000000:5885776..5902943-

>transcript:BL96573_cuf5 ID=transcript:BL96573_cuf5|Name=transcript:BL96573_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=3030bp|location=Sequence derived from alignment at Sc0000000:5885776..5902943- (Branchiostoma lanceolatum)
ATGCAGATCTACAAACTTCTGCTTATGCTCGCGGCTGTCATCACAGCACG
GGCACAGTCGTGTGATTTTGACTTTGGGTGGTGCAGCTATACAGACAACA
ATGGACAGATGGAGTGGGATAGATACAACGTAGCTGGCCCACTGTATGCA
TTCCACGCAATCAACCCCATGTTTCCTGGCAGCGGACCAGCAGATGATCA
CACGCAGCCAGTGGGACACGATGGCTCCTATGTGATGTCAAATTGTGGAG
GCGCAACAGCAGCAGGAGATGTAGCAACTATCACCAGTCCTGACATCATC
GGCCCCTGTACCCTGGAGTTCTGGTACACCATGTACGGCACGGATCTGGA
TATGTCAGTCTACCTGTTACAGAAGGGACAGAAGACACAGGTCTGGCACA
GAGAGGATGTGAACGAAGACTTCTGGCAGCAAGCTAGTGTACAACTGTCT
CCTCCTCTGCAAGAAGCTTATCAGCTTGTGTTTGAGACAGTGAGAGATGT
AAATCACCTGTGCAGCGTTGCCTTTGATGACATCAAGCTGGCCCCAGCTC
CGCTGTTGAAGTGTGACTTCGAGAATACTGGCCCCTGTGCCCTGAGACAA
GACGTCATGCAGATCTACAAACTTCTGCTTATGCTCGCGGCTGTCATCAC
AGCACGGGCACAGTCGTGTGATTTTGACTTTGGGTGGTGCAGCTATACAG
ACAACAATGGACAGATGGAGTGGGATAGATACAACGTAGCTGGCCCACTG
TATGCATTCCACGCAATCAACCCCATGTTTCCTGGCAGCGGACCAGCAGA
TGATCACACGCAGCCAGTGGGACACGATGGCTCCTATGTGATGTCAAATT
GTGGAGGCGCAACAGCAGCAGGAGATGTAGCAACTATCACCAGTCCTGAC
ATCATCGGCCCCTGTACCCTGGAGTTCTGGTACACCATGTACGGCACGGA
TCTGGATATGTCAGTCTACCTGTTACAGAAGGGACAGAAGACACAGGTCT
GGCACAGAGAGGATGTGAACGAAGACTTCTGGCAGCAAGCTAGTGTACAA
CTGTCTCCTCCTCTGCAAGAAGCTTATCAGCTTGTGTTTGAGACAGTGAG
AGATGTAAATCACCTGTGCAGCGTTGCCTTTGATGACATCAAGCTGGCCC
CAGCTCCGCTGTTGAAGTGTGACTTCGAGAATACTGGCCCCTGTGCCCTG
AGACAAGACGTCATGCAGATCTACAAACTTCTGCTTATGCTCGCGGCTGT
CATCACAGCACGGGCACAGTCGTGTGATTTTGACTTTGGGTGGTGCAGCT
ATACAGACAACAATGGACAGATGGAGTGGGATAGATACAACGTAGCTGGC
CCACTGTATGCATTCCACGCAATCAACCCCATGTTTCCTGGCAGCGGACC
AGCAGATGATCACACGCAGCCAGTGGGACACGATGGCTCCTATGTGATGT
CAAATTGTGGAGGCGCAACAGCAGCAGGAGATGTAGCAACTATCACCAGT
CCTGACATCATCGGCCCCTGTACCCTGGAGTTCTGGTACACCATGTACGG
CACGGATCTGGATATGTCAGTCTACCTGTTACAGAAGGGACAGAAGACAC
AGGTCTGGCACAGAGAGGATGTGAACGAAGACTTCTGGCAGCAAGCTAGT
GTACAACTGTCTCCTCCTCTGCAAGAAGCTTATCAGCTTGTGTTTGAGAC
AGTGAGAGATGTAAATCACCTGTGCAGCGTTGCCTTTGATGACATCAAGC
TGGCCCCAGCTCCGCTGTTGAAGTGTGACTTCGAGAATACTGGCCCCTGT
GCCCTGAGACAAGACGTCATGCAGATCTACAAACTTCTGCTTATGCTCGC
GGCTGTCATCACAGCACGGGCACAGTCGTGTGATTTTGACTTTGGGTGGT
GCAGCTATACAGACAACAATGGACAGATGGAGTGGGATAGATACAACGTA
GCTGGCCCACTGTATGCATTCCACGCAATCAACCCCATGTTTCCTGGCAG
CGGACCAGCAGATGATCACACGCAGCCAGTGGGACACGATGGCTCCTATG
TGATGTCAAATTGTGGAGGCGCAACAGCAGCAGGAGATGTAGCAACTATC
ACCAGTCCTGACATCATCGGCCCCTGTACCCTGGAGTTCTGGTACACCAT
GTACGGCACGGATCTGGATATGTCAGTCTACCTGTTACAGAAGGGACAGA
AGACACAGGTCTGGCACAGAGAGGATGTGAACGAAGACTTCTGGCAGCAA
GCTAGTGTACAACTGTCTCCTCCTCTGCAAGAAGCTTATCAGCTTGTGTT
TGAGACAGTGAGAGATGTAAATCACCTGTGCAGCGTTGCCTTTGATGACA
TCAAGCTGGCCCCAGCTCCGCTGTTGAAGTGTGACTTCGAGAATACTGGC
CCCTGTGCCCTGAGACAAGACGTCATGCAGATCTACAAACTTCTGCTTAT
GCTCGCGGCTGTCATCACAGCACGGGCACAGTCGTGTGATTTTGACTTTG
GGTGGTGCAGCTATACAGACAACAATGGACAGATGGAGTGGGATAGATAC
AACGTAGCTGGCCCACTGTATGCATTCCACGCAATCAACCCCATGTTTCC
TGGCAGCGGACCAGCAGATGATCACACGCAGCCAGTGGGACACGATGGCT
CCTATGTGATGTCAAATTGTGGAGGCGCAACAGCAGCAGGAGATGTAGCA
ACTATCACCAGTCCTGACATCATCGGCCCCTGTACCCTGGAGTTCTGGTA
CACCATGTACGGCACGGATCTGGATATGTCAGTCTACCTGTTACAGAAGG
GACAGAAGACACAGGTCTGGCACAGAGAGGATGTGAACGAAGACTTCTGG
CAGCAAGCTAGTGTACAACTGTCTCCTCCTCTGCAAGAAGCTTATCAGCT
TGTGTTTGAGACAGTGAGAGATGTAAATCACCTGTGCAGCGTTGCCTTTG
ATGACATCAAGCTGGCCCCAGCTCCGCTGTTGAAGTGTGACTTCGAGAAT
ACTGGCCCCTGTGCCCTGAGACAAGACGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL96573gene:BL96573Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL96573_cuf5transcript:BL96573_cuf5-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL96573_cuf5-E1BL96573_cuf5-E1-1564476830-15292Branchiostoma lanceolatumexon
BL96573_cuf5-E2BL96573_cuf5-E2-1564476830-15289Branchiostoma lanceolatumexon
BL96573_cuf5-E3BL96573_cuf5-E3-1564476830-15287Branchiostoma lanceolatumexon
BL96573_cuf5-E4BL96573_cuf5-E4-1564476830-15285Branchiostoma lanceolatumexon
BL96573_cuf5-E5BL96573_cuf5-E5-1564476830-15283Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000000genomeSc0000000:5885776..5902943 -
Properties
Property NameValue
Transcript idBL96573_cuf5
Biotypeprotein_coding