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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96568_cuf9 >transcript:BL96568_cuf9-protein ID=transcript:BL96568_cuf9-protein|Name=transcript:BL96568_cuf9|organism=Branchiostoma lanceolatum|type=polypeptide|length=314bp
QSFTPVDMVFLLDGSGSVTAPNFELVKDFTQDVIRNFNVSTSATRVGVVQ FSDTVRTEFFLNTFQTKNQVLQAVDGLGYLQGNTLTGAAIDFVRTSTFST PAGNRPGQPDFLVVVTDGLSQDNVAVPAQTARNNGISIFAVGIGSEVDTD TLLQIAGNPARILQINDFAGLINAEEQLTSIVCNISFCGDPGAPANGFRL GEFFTGSTVTFGCNAGFILQGDTNALCLENGQWNNPVPVCVAVTTIPPTT TPAPISVCSSITPVDLVFLLDGSSSITSPNFQIVKDFTADVVRTFNVSSA ATNVGLVQYSDTIR Run BLAST on NCBI mRNA from alignment at Sc0000000:4905049..4906615- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96568_cuf9 ID=transcript:BL96568_cuf9|Name=transcript:BL96568_cuf9|organism=Branchiostoma lanceolatum|type=mRNA|length=1567bp|location=Sequence derived from alignment at Sc0000000:4905049..4906615- (Branchiostoma lanceolatum) GTCAGAGCTTCACCCCAGTCGACATGGTTTTCCTGCTGGATGGCTCCGGT
AGCGTCACAGCACCCAACTTCGAACTTGTGAAGGATTTCACACAGGACGT
CATCAGAAACTTCAACGTGTCAACCTCTGCCACGAGAGTCGGCGTGGTTC
AGTTCAGCGACACCGTCCGCACAGAGTTCTTCCTCAACACCTTCCAGACC
AAGAACCAGGTGCTTCAGGCGGTCGACGGCCTCGGTTACCTTCAGGGGAA
CACGCTTACCGGCGCGGCCATCGATTTTGTCCGCACTAGCACCTTTTCGA
CGCCGGCGGGCAACCGGCCAGGCCAGCCCGACTTCCTCGTTGTGGTCACC
GACGGCCTGTCGCAGGACAACGTCGCCGTCCCTGCGCAGACTGCACGCAA
CAACGGTATCTCCATCTTCGCGGTGGGTATCGGGAGTGAAGTGGACACGG
ACACCTTGCTCCAGATCGCGGGAAATCCTGCCAGAATCCTGCAGATTAAC
GACTTTGCTGGGCTCATCAATGCTGAGGAGCAGCTTACCAGTATTGTCTG
CAACAGTAAGTACATTGCGTGGAACATGTGATTTGATATTTTCCTAATCT
TATCTTCTCACAATAATGACTAATCTAATTCTATGCCAATGCTACATTCA
AACTACAATGCTTCCAAGGCTTTGAAGTTCAAGTAGATGGGTATAGAAAT
CATGAATTATTTAAAGCTGTATTGTGCTTCTAAGTAATACTCTAATTATC
TTCTGTTCTGAATGCTTGCCAACTAGATGAAATACCTCTCAATGGTGAGT
AACAATTGTATGGAATACGTCAATCAATTGTCTCATTATAATTTGTGAGT
AAAAGTGAATGAAGACAATCTTAAGAGAAAGCATCTTTTTGATAATACAT
TCGATTCGTTTAGTTTGAAATAACAATCACTAATCAGTACAGTAACAATA
ACTGTAGGGAGGCAATTTGCATATTTGAAGTTGAACAGGCATGTAGTGCA
TGCCTTGTGTTTTTCCTTTATGCTATTATCATCAACCTGATTGTGTTCTT
GCACACAGTCTCTTTCTGCGGCGACCCTGGAGCTCCTGCTAACGGTTTCC
GACTCGGAGAGTTCTTCACTGGTAGCACTGTCACATTTGGGTGCAATGCC
GGCTTCATCCTCCAGGGGGATACAAACGCGCTCTGTCTTGAGAATGGACA
GTGGAACAACCCTGTACCTGTGTGTGTAGGTACGTAAAGAGAAGTTGTTC
TGTAGATGTTTGCACGGATGCACATAGATTTTTTTTGCCTACATGAAACA
CTCGACTAACTTTTGAATAATCCTTCTATTCTCTTTCCTCATCTCAGCCG
TCACCACAATTCCACCTACCACGACCCCCGCCCCCATCTCAGTCTGCAGC
AGCATCACCCCTGTTGACCTGGTCTTCCTGCTGGACGGCTCCAGTAGCAT
CACATCACCCAACTTCCAGATCGTCAAAGACTTCACTGCTGACGTGGTCA
GAACCTTCAATGTGTCGTCTGCTGCCACCAACGTTGGGCTGGTCCAGTAC
AGCGACACCATCCGGAC Coding sequence (CDS) from alignment at Sc0000000:4905049..4906615- >transcript:BL96568_cuf9 ID=transcript:BL96568_cuf9|Name=transcript:BL96568_cuf9|organism=Branchiostoma lanceolatum|type=CDS|length=2826bp|location=Sequence derived from alignment at Sc0000000:4905049..4906615- (Branchiostoma lanceolatum) CAGAGCTTCACCCCAGTCGACATGGTTTTCCTGCTGGATGGCTCCGGTAG CGTCACAGCACCCAACTTCGAACTTGTGAAGGATTTCACACAGGACGTCA TCAGAAACTTCAACGTGTCAACCTCTGCCACGAGAGTCGGCGTGGTTCAG TTCAGCGACACCGTCCGCACAGAGTTCTTCCTCAACACCTTCCAGACCAA GAACCAGGTGCTTCAGGCGGTCGACGGCCTCGGTTACCTTCAGGGGAACA CGCTTACCGGCGCGGCCATCGATTTTGTCCGCACTAGCACCTTTTCGACG CCGGCGGGCAACCGGCCAGGCCAGCCCGACTTCCTCGTTGTGGTCACCGA CGGCCTGTCGCAGGACAACGTCGCCGTCCCTGCGCAGACTGCACGCAACA ACGGTATCTCCATCTTCGCGGTGGGTATCGGGAGTGAAGTGGACACGGAC ACCTTGCTCCAGATCGCGGGAAATCCTGCCAGAATCCTGCAGATTAACGA CTTTGCTGGGCTCATCAATGCTGAGGAGCAGCTTACCAGTATTGTCTGCA ACATCTCTTTCTGCGGCGACCCTGGAGCTCCTGCTAACGGTTTCCGACTC GGAGAGTTCTTCACTGGTAGCACTGTCACATTTGGGTGCAATGCCGGCTT CATCCTCCAGGGGGATACAAACGCGCTCTGTCTTGAGAATGGACAGTGGA ACAACCCTGTACCTGTGTGTGTAGCCGTCACCACAATTCCACCTACCACG ACCCCCGCCCCCATCTCAGTCTGCAGCAGCATCACCCCTGTTGACCTGGT CTTCCTGCTGGACGGCTCCAGTAGCATCACATCACCCAACTTCCAGATCG TCAAAGACTTCACTGCTGACGTGGTCAGAACCTTCAATGTGTCGTCTGCT GCCACCAACGTTGGGCTGGTCCAGTACAGCGACACCATCCGGCAGAGCTT CACCCCAGTCGACATGGTTTTCCTGCTGGATGGCTCCGGTAGCGTCACAG CACCCAACTTCGAACTTGTGAAGGATTTCACACAGGACGTCATCAGAAAC TTCAACGTGTCAACCTCTGCCACGAGAGTCGGCGTGGTTCAGTTCAGCGA CACCGTCCGCACAGAGTTCTTCCTCAACACCTTCCAGACCAAGAACCAGG TGCTTCAGGCGGTCGACGGCCTCGGTTACCTTCAGGGGAACACGCTTACC GGCGCGGCCATCGATTTTGTCCGCACTAGCACCTTTTCGACGCCGGCGGG CAACCGGCCAGGCCAGCCCGACTTCCTCGTTGTGGTCACCGACGGCCTGT CGCAGGACAACGTCGCCGTCCCTGCGCAGACTGCACGCAACAACGGTATC TCCATCTTCGCGGTGGGTATCGGGAGTGAAGTGGACACGGACACCTTGCT CCAGATCGCGGGAAATCCTGCCAGAATCCTGCAGATTAACGACTTTGCTG GGCTCATCAATGCTGAGGAGCAGCTTACCAGTATTGTCTGCAACATCTCT TTCTGCGGCGACCCTGGAGCTCCTGCTAACGGTTTCCGACTCGGAGAGTT CTTCACTGGTAGCACTGTCACATTTGGGTGCAATGCCGGCTTCATCCTCC AGGGGGATACAAACGCGCTCTGTCTTGAGAATGGACAGTGGAACAACCCT GTACCTGTGTGTGTAGCCGTCACCACAATTCCACCTACCACGACCCCCGC CCCCATCTCAGTCTGCAGCAGCATCACCCCTGTTGACCTGGTCTTCCTGC TGGACGGCTCCAGTAGCATCACATCACCCAACTTCCAGATCGTCAAAGAC TTCACTGCTGACGTGGTCAGAACCTTCAATGTGTCGTCTGCTGCCACCAA CGTTGGGCTGGTCCAGTACAGCGACACCATCCGGCAGAGCTTCACCCCAG TCGACATGGTTTTCCTGCTGGATGGCTCCGGTAGCGTCACAGCACCCAAC TTCGAACTTGTGAAGGATTTCACACAGGACGTCATCAGAAACTTCAACGT GTCAACCTCTGCCACGAGAGTCGGCGTGGTTCAGTTCAGCGACACCGTCC GCACAGAGTTCTTCCTCAACACCTTCCAGACCAAGAACCAGGTGCTTCAG GCGGTCGACGGCCTCGGTTACCTTCAGGGGAACACGCTTACCGGCGCGGC CATCGATTTTGTCCGCACTAGCACCTTTTCGACGCCGGCGGGCAACCGGC CAGGCCAGCCCGACTTCCTCGTTGTGGTCACCGACGGCCTGTCGCAGGAC AACGTCGCCGTCCCTGCGCAGACTGCACGCAACAACGGTATCTCCATCTT CGCGGTGGGTATCGGGAGTGAAGTGGACACGGACACCTTGCTCCAGATCG CGGGAAATCCTGCCAGAATCCTGCAGATTAACGACTTTGCTGGGCTCATC AATGCTGAGGAGCAGCTTACCAGTATTGTCTGCAACATCTCTTTCTGCGG CGACCCTGGAGCTCCTGCTAACGGTTTCCGACTCGGAGAGTTCTTCACTG GTAGCACTGTCACATTTGGGTGCAATGCCGGCTTCATCCTCCAGGGGGAT ACAAACGCGCTCTGTCTTGAGAATGGACAGTGGAACAACCCTGTACCTGT GTGTGTAGCCGTCACCACAATTCCACCTACCACGACCCCCGCCCCCATCT CAGTCTGCAGCAGCATCACCCCTGTTGACCTGGTCTTCCTGCTGGACGGC TCCAGTAGCATCACATCACCCAACTTCCAGATCGTCAAAGACTTCACTGC TGACGTGGTCAGAACCTTCAATGTGTCGTCTGCTGCCACCAACGTTGGGC TGGTCCAGTACAGCGACACCATCCGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000000 | genome | Sc0000000:4905049..4906615 - |
Properties
Property Name | Value |
Transcript id | BL96568_cuf9 |
Biotype | protein_coding |
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